EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000018747 (Gene tree)
Gene ID: 109528565
Gene Symbol: LSM14B
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: protein LSM14 homolog B-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2933 bases
Position: chrKV880338.1:6716275-6719207
Accession: 109528565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015193	FDF	PF09532.10	4.2e-15	1	1
ENSHCOP00000015193	LSM14	PF12701.7	2.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023041	LSM14B-201	1641	XM_019891353	ENSHCOP00000015193	370 (aa)	XP_019746912	UPI00094EED11

Gene Model

Click here to download ENSHCOG00000018747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000018747	LSM14B	62	36.170	ENSHCOG00000004867	lsm14b	92	36.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018747	LSM14B	92	50.409	ENSG00000149657	LSM14B	95	50.130	Homo_sapiens
ENSHCOG00000018747	LSM14B	90	47.159	ENSAPOG00000001780	lsm14b	93	47.568	Acanthochromis_polyacanthus
ENSHCOG00000018747	LSM14B	92	46.384	ENSAMEG00000013430	LSM14B	97	46.905	Ailuropoda_melanoleuca
ENSHCOG00000018747	LSM14B	92	46.418	ENSACIG00000012266	lsm14b	95	45.652	Amphilophus_citrinellus
ENSHCOG00000018747	LSM14B	64	47.791	ENSACIG00000003147	LSM14B	100	48.718	Amphilophus_citrinellus
ENSHCOG00000018747	LSM14B	100	62.176	ENSAOCG00000006667	LSM14B	100	61.658	Amphiprion_ocellaris
ENSHCOG00000018747	LSM14B	90	47.126	ENSAOCG00000012380	lsm14b	93	46.995	Amphiprion_ocellaris
ENSHCOG00000018747	LSM14B	90	45.588	ENSAPEG00000023633	lsm14b	93	45.429	Amphiprion_percula
ENSHCOG00000018747	LSM14B	90	48.844	ENSATEG00000016603	lsm14b	94	49.307	Anabas_testudineus
ENSHCOG00000018747	LSM14B	70	54.064	ENSATEG00000015895	LSM14B	94	55.034	Anabas_testudineus
ENSHCOG00000018747	LSM14B	84	40.992	ENSAPLG00000013203	LSM14B	96	42.250	Anas_platyrhynchos
ENSHCOG00000018747	LSM14B	92	50.416	ENSACAG00000016195	LSM14B	96	50.526	Anolis_carolinensis
ENSHCOG00000018747	LSM14B	92	50.685	ENSANAG00000037915	LSM14B	95	50.392	Aotus_nancymaae
ENSHCOG00000018747	LSM14B	90	48.116	ENSACLG00000019663	lsm14b	94	49.036	Astatotilapia_calliptera
ENSHCOG00000018747	LSM14B	59	48.485	ENSACLG00000011955	-	79	46.809	Astatotilapia_calliptera
ENSHCOG00000018747	LSM14B	59	51.082	ENSACLG00000019624	-	79	49.362	Astatotilapia_calliptera
ENSHCOG00000018747	LSM14B	59	44.589	ENSACLG00000008384	-	77	43.290	Astatotilapia_calliptera
ENSHCOG00000018747	LSM14B	92	49.863	ENSAMXG00000002865	lsm14b	96	53.264	Astyanax_mexicanus
ENSHCOG00000018747	LSM14B	92	47.118	ENSBTAG00000021558	LSM14B	96	45.012	Bos_taurus
ENSHCOG00000018747	LSM14B	92	50.138	ENSCJAG00000014434	LSM14B	95	49.869	Callithrix_jacchus
ENSHCOG00000018747	LSM14B	82	45.028	ENSCAFG00000012518	LSM14B	95	45.669	Canis_familiaris
ENSHCOG00000018747	LSM14B	92	52.778	ENSCAFG00020022150	LSM14B	95	53.175	Canis_lupus_dingo
ENSHCOG00000018747	LSM14B	92	52.222	ENSCHIG00000010284	-	95	52.520	Capra_hircus
ENSHCOG00000018747	LSM14B	94	43.132	ENSCHIG00000022681	-	95	42.742	Capra_hircus
ENSHCOG00000018747	LSM14B	81	48.607	ENSTSYG00000031914	LSM14B	85	48.538	Carlito_syrichta
ENSHCOG00000018747	LSM14B	82	48.297	ENSCAPG00000013059	LSM14B	95	47.536	Cavia_aperea
ENSHCOG00000018747	LSM14B	81	48.447	ENSCPOG00000038080	LSM14B	95	47.674	Cavia_porcellus
ENSHCOG00000018747	LSM14B	92	50.411	ENSCCAG00000021267	LSM14B	95	50.392	Cebus_capucinus
ENSHCOG00000018747	LSM14B	92	37.006	ENSCCAG00000024900	-	80	36.548	Cebus_capucinus
ENSHCOG00000018747	LSM14B	92	49.864	ENSCATG00000036006	LSM14B	95	49.610	Cercocebus_atys
ENSHCOG00000018747	LSM14B	81	49.062	ENSCLAG00000003186	LSM14B	95	48.961	Chinchilla_lanigera
ENSHCOG00000018747	LSM14B	92	45.567	ENSCSAG00000015729	LSM14B	96	45.519	Chlorocebus_sabaeus
ENSHCOG00000018747	LSM14B	64	32.016	ENSCHOG00000006997	-	94	32.364	Choloepus_hoffmanni
ENSHCOG00000018747	LSM14B	92	46.898	ENSCPBG00000027065	LSM14B	96	47.143	Chrysemys_picta_bellii
ENSHCOG00000018747	LSM14B	81	48.308	ENSCANG00000036986	LSM14B	96	48.256	Colobus_angolensis_palliatus
ENSHCOG00000018747	LSM14B	92	51.397	ENSCGRG00001018399	Lsm14b	96	51.194	Cricetulus_griseus_chok1gshd
ENSHCOG00000018747	LSM14B	63	37.367	ENSCGRG00000006111	-	98	38.000	Cricetulus_griseus_crigri
ENSHCOG00000018747	LSM14B	57	39.726	ENSCGRG00000002484	-	94	39.916	Cricetulus_griseus_crigri
ENSHCOG00000018747	LSM14B	97	60.106	ENSCSEG00000020669	LSM14B	96	59.574	Cynoglossus_semilaevis
ENSHCOG00000018747	LSM14B	90	48.246	ENSCSEG00000004722	lsm14b	95	46.791	Cynoglossus_semilaevis
ENSHCOG00000018747	LSM14B	69	41.509	ENSCVAG00000012433	-	98	45.247	Cyprinodon_variegatus
ENSHCOG00000018747	LSM14B	92	50.000	ENSDARG00000025386	lsm14b	96	49.741	Danio_rerio
ENSHCOG00000018747	LSM14B	63	37.676	ENSDNOG00000025246	LSM14B	95	37.667	Dasypus_novemcinctus
ENSHCOG00000018747	LSM14B	82	49.387	ENSDORG00000016683	Lsm14b	95	38.411	Dipodomys_ordii
ENSHCOG00000018747	LSM14B	60	41.810	ENSETEG00000011188	-	97	41.772	Echinops_telfairi
ENSHCOG00000018747	LSM14B	94	43.631	ENSETEG00000001869	-	96	42.932	Echinops_telfairi
ENSHCOG00000018747	LSM14B	63	42.041	ENSEASG00005023218	LSM14B	94	42.045	Equus_asinus_asinus
ENSHCOG00000018747	LSM14B	92	51.944	ENSECAG00000010659	LSM14B	95	51.451	Equus_caballus
ENSHCOG00000018747	LSM14B	92	54.930	ENSELUG00000016299	LSM14B	96	55.108	Esox_lucius
ENSHCOG00000018747	LSM14B	96	51.613	ENSELUG00000005780	lsm14b	96	51.733	Esox_lucius
ENSHCOG00000018747	LSM14B	92	52.778	ENSFCAG00000003248	LSM14B	95	53.175	Felis_catus
ENSHCOG00000018747	LSM14B	82	43.989	ENSFALG00000010618	LSM14B	96	43.182	Ficedula_albicollis
ENSHCOG00000018747	LSM14B	81	48.137	ENSFDAG00000002214	LSM14B	96	47.399	Fukomys_damarensis
ENSHCOG00000018747	LSM14B	76	59.060	ENSFHEG00000003362	LSM14B	84	56.587	Fundulus_heteroclitus
ENSHCOG00000018747	LSM14B	91	44.350	ENSFHEG00000006237	lsm14b	94	44.865	Fundulus_heteroclitus
ENSHCOG00000018747	LSM14B	95	48.753	ENSGMOG00000017115	lsm14b	93	49.311	Gadus_morhua
ENSHCOG00000018747	LSM14B	92	49.589	ENSGALG00000005125	LSM14B	96	50.000	Gallus_gallus
ENSHCOG00000018747	LSM14B	71	47.368	ENSGAFG00000013723	LSM14B	100	47.368	Gambusia_affinis
ENSHCOG00000018747	LSM14B	90	43.429	ENSGAFG00000020318	lsm14b	94	43.316	Gambusia_affinis
ENSHCOG00000018747	LSM14B	92	44.959	ENSGACG00000009973	lsm14b	95	49.046	Gasterosteus_aculeatus
ENSHCOG00000018747	LSM14B	56	41.850	ENSGAGG00000004106	LSM14B	89	41.803	Gopherus_agassizii
ENSHCOG00000018747	LSM14B	83	47.147	ENSGGOG00000005630	LSM14B	91	46.875	Gorilla_gorilla
ENSHCOG00000018747	LSM14B	92	50.833	ENSHGLG00000015055	LSM14B	95	50.794	Heterocephalus_glaber_female
ENSHCOG00000018747	LSM14B	81	47.468	ENSHGLG00100015273	LSM14B	96	47.463	Heterocephalus_glaber_male
ENSHCOG00000018747	LSM14B	92	51.261	ENSIPUG00000014946	lsm14b	91	51.989	Ictalurus_punctatus
ENSHCOG00000018747	LSM14B	81	47.706	ENSSTOG00000020482	LSM14B	96	47.688	Ictidomys_tridecemlineatus
ENSHCOG00000018747	LSM14B	91	50.413	ENSJJAG00000012728	Lsm14b	94	50.394	Jaculus_jaculus
ENSHCOG00000018747	LSM14B	54	53.960	ENSKMAG00000012834	-	95	56.164	Kryptolebias_marmoratus
ENSHCOG00000018747	LSM14B	90	47.500	ENSKMAG00000017524	lsm14b	98	47.342	Kryptolebias_marmoratus
ENSHCOG00000018747	LSM14B	71	49.621	ENSLBEG00000007951	LSM14B	100	47.727	Labrus_bergylta
ENSHCOG00000018747	LSM14B	91	47.030	ENSLACG00000003849	LSM14B	96	46.479	Latimeria_chalumnae
ENSHCOG00000018747	LSM14B	92	51.811	ENSLOCG00000003746	lsm14b	96	52.243	Lepisosteus_oculatus
ENSHCOG00000018747	LSM14B	82	49.074	ENSLAFG00000007492	LSM14B	96	48.397	Loxodonta_africana
ENSHCOG00000018747	LSM14B	92	50.409	ENSMFAG00000041479	LSM14B	95	50.130	Macaca_fascicularis
ENSHCOG00000018747	LSM14B	92	50.409	ENSMMUG00000014084	LSM14B	95	50.130	Macaca_mulatta
ENSHCOG00000018747	LSM14B	92	50.409	ENSMNEG00000045573	LSM14B	95	50.130	Macaca_nemestrina
ENSHCOG00000018747	LSM14B	81	47.095	ENSMLEG00000040895	LSM14B	96	46.821	Mandrillus_leucophaeus
ENSHCOG00000018747	LSM14B	90	44.693	ENSMAMG00000020539	lsm14b	94	46.684	Mastacembelus_armatus
ENSHCOG00000018747	LSM14B	100	68.750	ENSMAMG00000024124	LSM14B	100	68.750	Mastacembelus_armatus
ENSHCOG00000018747	LSM14B	59	44.589	ENSMZEG00005002688	-	78	43.478	Maylandia_zebra
ENSHCOG00000018747	LSM14B	93	60.440	ENSMZEG00005026001	LSM14B	99	61.538	Maylandia_zebra
ENSHCOG00000018747	LSM14B	90	47.826	ENSMZEG00005000987	lsm14b	94	48.760	Maylandia_zebra
ENSHCOG00000018747	LSM14B	59	43.723	ENSMZEG00005026087	-	78	42.609	Maylandia_zebra
ENSHCOG00000018747	LSM14B	84	46.246	ENSMGAG00000005300	LSM14B	95	47.500	Meleagris_gallopavo
ENSHCOG00000018747	LSM14B	92	51.117	ENSMAUG00000020700	Lsm14b	96	50.928	Mesocricetus_auratus
ENSHCOG00000018747	LSM14B	92	50.136	ENSMICG00000014675	LSM14B	95	50.000	Microcebus_murinus
ENSHCOG00000018747	LSM14B	57	40.654	ENSMOCG00000005119	-	93	37.226	Microtus_ochrogaster
ENSHCOG00000018747	LSM14B	92	51.240	ENSMOCG00000020600	Lsm14b	95	51.064	Microtus_ochrogaster
ENSHCOG00000018747	LSM14B	92	60.278	ENSMMOG00000017321	LSM14B	100	59.949	Mola_mola
ENSHCOG00000018747	LSM14B	91	46.832	ENSMMOG00000020042	lsm14b	98	47.396	Mola_mola
ENSHCOG00000018747	LSM14B	63	38.246	ENSMODG00000016690	LSM14B	95	38.742	Monodelphis_domestica
ENSHCOG00000018747	LSM14B	94	62.185	ENSMALG00000022251	LSM14B	100	63.636	Monopterus_albus
ENSHCOG00000018747	LSM14B	96	46.995	ENSMALG00000004783	lsm14b	94	47.383	Monopterus_albus
ENSHCOG00000018747	LSM14B	92	51.397	MGP_CAROLIEiJ_G0024770	Lsm14b	95	51.330	Mus_caroli
ENSHCOG00000018747	LSM14B	92	50.975	ENSMUSG00000039108	Lsm14b	95	51.330	Mus_musculus
ENSHCOG00000018747	LSM14B	92	50.689	MGP_PahariEiJ_G0026214	Lsm14b	95	51.330	Mus_pahari
ENSHCOG00000018747	LSM14B	92	50.975	MGP_SPRETEiJ_G0025693	Lsm14b	95	51.330	Mus_spretus
ENSHCOG00000018747	LSM14B	87	43.501	ENSMPUG00000007584	LSM14B	97	43.939	Mustela_putorius_furo
ENSHCOG00000018747	LSM14B	91	51.821	ENSMLUG00000000304	LSM14B	95	51.194	Myotis_lucifugus
ENSHCOG00000018747	LSM14B	55	39.189	ENSNGAG00000016550	Lsm14b	55	49.219	Nannospalax_galili
ENSHCOG00000018747	LSM14B	81	47.678	ENSNLEG00000015757	LSM14B	96	47.246	Nomascus_leucogenys
ENSHCOG00000018747	LSM14B	65	67.626	ENSMEUG00000008267	-	69	68.345	Notamacropus_eugenii
ENSHCOG00000018747	LSM14B	92	49.864	ENSODEG00000004099	LSM14B	95	49.610	Octodon_degus
ENSHCOG00000018747	LSM14B	90	48.266	ENSONIG00000020318	lsm14b	94	48.663	Oreochromis_niloticus
ENSHCOG00000018747	LSM14B	74	49.301	ENSOANG00000003370	LSM14B	98	48.592	Ornithorhynchus_anatinus
ENSHCOG00000018747	LSM14B	82	48.758	ENSOCUG00000006279	LSM14B	96	48.235	Oryctolagus_cuniculus
ENSHCOG00000018747	LSM14B	90	46.724	ENSORLG00000013525	lsm14b	92	47.238	Oryzias_latipes
ENSHCOG00000018747	LSM14B	94	58.496	ENSORLG00000028353	LSM14B	98	57.447	Oryzias_latipes
ENSHCOG00000018747	LSM14B	65	42.045	ENSORLG00020018191	-	95	43.310	Oryzias_latipes_hni
ENSHCOG00000018747	LSM14B	90	46.724	ENSORLG00020020553	lsm14b	92	47.238	Oryzias_latipes_hni
ENSHCOG00000018747	LSM14B	90	46.724	ENSORLG00015016862	lsm14b	92	47.238	Oryzias_latipes_hsok
ENSHCOG00000018747	LSM14B	94	58.774	ENSORLG00015013157	LSM14B	98	57.713	Oryzias_latipes_hsok
ENSHCOG00000018747	LSM14B	90	46.724	ENSOMEG00000023917	lsm14b	92	46.961	Oryzias_melastigma
ENSHCOG00000018747	LSM14B	67	46.774	ENSOMEG00000000171	-	91	46.774	Oryzias_melastigma
ENSHCOG00000018747	LSM14B	92	46.782	ENSOGAG00000003915	LSM14B	96	46.556	Otolemur_garnettii
ENSHCOG00000018747	LSM14B	84	42.973	ENSOARG00000014706	LSM14B	95	41.855	Ovis_aries
ENSHCOG00000018747	LSM14B	83	47.147	ENSPPAG00000035799	LSM14B	91	46.875	Pan_paniscus
ENSHCOG00000018747	LSM14B	92	52.500	ENSPPRG00000009197	LSM14B	95	52.910	Panthera_pardus
ENSHCOG00000018747	LSM14B	63	42.213	ENSPTIG00000021518	LSM14B	98	42.966	Panthera_tigris_altaica
ENSHCOG00000018747	LSM14B	92	50.409	ENSPTRG00000013696	LSM14B	95	50.130	Pan_troglodytes
ENSHCOG00000018747	LSM14B	92	50.136	ENSPANG00000011747	LSM14B	95	49.870	Papio_anubis
ENSHCOG00000018747	LSM14B	92	50.980	ENSPKIG00000003275	lsm14b	88	73.684	Paramormyrops_kingsleyae
ENSHCOG00000018747	LSM14B	82	46.884	ENSPSIG00000014762	LSM14B	96	47.606	Pelodiscus_sinensis
ENSHCOG00000018747	LSM14B	92	50.980	ENSPEMG00000017688	Lsm14b	96	50.933	Peromyscus_maniculatus_bairdii
ENSHCOG00000018747	LSM14B	92	51.381	ENSPCIG00000013405	LSM14B	95	51.579	Phascolarctos_cinereus
ENSHCOG00000018747	LSM14B	93	46.409	ENSPFOG00000005631	lsm14b	92	45.330	Poecilia_formosa
ENSHCOG00000018747	LSM14B	93	46.703	ENSPLAG00000002449	lsm14b	92	45.902	Poecilia_latipinna
ENSHCOG00000018747	LSM14B	91	59.827	ENSPLAG00000005793	LSM14B	96	59.511	Poecilia_latipinna
ENSHCOG00000018747	LSM14B	91	46.286	ENSPMEG00000000745	lsm14b	94	44.595	Poecilia_mexicana
ENSHCOG00000018747	LSM14B	91	58.721	ENSPMEG00000022953	LSM14B	96	58.696	Poecilia_mexicana
ENSHCOG00000018747	LSM14B	64	46.304	ENSPREG00000007828	LSM14B	94	48.519	Poecilia_reticulata
ENSHCOG00000018747	LSM14B	92	46.721	ENSPPYG00000011194	LSM14B	95	47.135	Pongo_abelii
ENSHCOG00000018747	LSM14B	92	50.681	ENSPCOG00000013625	LSM14B	95	50.260	Propithecus_coquereli
ENSHCOG00000018747	LSM14B	92	54.085	ENSPNAG00000012777	lsm14b	96	55.200	Pygocentrus_nattereri
ENSHCOG00000018747	LSM14B	92	45.522	ENSRNOG00000054557	Lsm14b	96	45.803	Rattus_norvegicus
ENSHCOG00000018747	LSM14B	82	48.160	ENSRBIG00000033461	LSM14B	95	48.116	Rhinopithecus_bieti
ENSHCOG00000018747	LSM14B	83	49.096	ENSRROG00000042949	LSM14B	87	49.003	Rhinopithecus_roxellana
ENSHCOG00000018747	LSM14B	81	47.095	ENSSBOG00000032820	LSM14B	96	47.965	Saimiri_boliviensis_boliviensis
ENSHCOG00000018747	LSM14B	83	49.541	ENSSHAG00000015528	LSM14B	93	50.145	Sarcophilus_harrisii
ENSHCOG00000018747	LSM14B	92	50.425	ENSSFOG00015004627	lsm14b	96	47.917	Scleropages_formosus
ENSHCOG00000018747	LSM14B	91	47.429	ENSSMAG00000012725	lsm14b	96	46.966	Scophthalmus_maximus
ENSHCOG00000018747	LSM14B	100	64.691	ENSSMAG00000000135	LSM14B	99	64.175	Scophthalmus_maximus
ENSHCOG00000018747	LSM14B	91	46.067	ENSSDUG00000020977	lsm14b	96	48.549	Seriola_dumerili
ENSHCOG00000018747	LSM14B	94	68.539	ENSSDUG00000022770	LSM14B	100	68.490	Seriola_dumerili
ENSHCOG00000018747	LSM14B	64	54.651	ENSSLDG00000011354	-	100	56.643	Seriola_lalandi_dorsalis
ENSHCOG00000018747	LSM14B	55	39.189	ENSSARG00000007749	-	99	39.189	Sorex_araneus
ENSHCOG00000018747	LSM14B	92	47.395	ENSSPUG00000014360	LSM14B	93	51.603	Sphenodon_punctatus
ENSHCOG00000018747	LSM14B	71	46.429	ENSSPAG00000018854	-	100	46.429	Stegastes_partitus
ENSHCOG00000018747	LSM14B	90	45.614	ENSSPAG00000020915	lsm14b	95	46.467	Stegastes_partitus
ENSHCOG00000018747	LSM14B	92	50.843	ENSSSCG00000026052	LSM14B	95	38.870	Sus_scrofa
ENSHCOG00000018747	LSM14B	82	49.541	ENSTGUG00000007884	LSM14B	95	48.459	Taeniopygia_guttata
ENSHCOG00000018747	LSM14B	94	65.181	ENSTRUG00000001529	LSM14B	100	64.599	Takifugu_rubripes
ENSHCOG00000018747	LSM14B	95	47.283	ENSTRUG00000011354	lsm14b	94	45.946	Takifugu_rubripes
ENSHCOG00000018747	LSM14B	91	47.486	ENSTNIG00000002445	lsm14b	93	47.733	Tetraodon_nigroviridis
ENSHCOG00000018747	LSM14B	92	46.685	ENSUAMG00000025298	LSM14B	95	47.619	Ursus_americanus
ENSHCOG00000018747	LSM14B	92	46.685	ENSUMAG00000000480	LSM14B	95	47.619	Ursus_maritimus
ENSHCOG00000018747	LSM14B	82	50.155	ENSVVUG00000015920	LSM14B	94	50.585	Vulpes_vulpes
ENSHCOG00000018747	LSM14B	87	49.853	ENSXETG00000001997	lsm14b	100	49.853	Xenopus_tropicalis
ENSHCOG00000018747	LSM14B	90	45.170	ENSXMAG00000010013	lsm14b	94	44.772	Xiphophorus_maculatus