EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000018819 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerase III subunit RPC4-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4338 bases
Position: chrKV880364.1:75025-79362
Accession: 109529285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000027206	RNA_pol_Rpc4	PF05132.14	9.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023113	-	1098	XM_019892592	ENSHCOP00000027206	365 (aa)	XP_019748151	-

Gene Model

Click here to download ENSHCOG00000018819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000018819	-	87	32.213	ENSHCOG00000002228	polr3d	92	34.819

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018819	-	98	36.386	ENSG00000168495	POLR3D	91	37.333	Homo_sapiens
ENSHCOG00000018819	-	96	32.308	ENSAPOG00000012197	polr3d	92	35.989	Acanthochromis_polyacanthus
ENSHCOG00000018819	-	94	54.663	ENSAPOG00000017634	zgc:171971	95	55.556	Acanthochromis_polyacanthus
ENSHCOG00000018819	-	98	36.538	ENSAMEG00000003221	POLR3D	90	37.867	Ailuropoda_melanoleuca
ENSHCOG00000018819	-	95	34.536	ENSACIG00000017832	polr3d	91	36.056	Amphilophus_citrinellus
ENSHCOG00000018819	-	98	49.250	ENSACIG00000003707	zgc:171971	97	51.378	Amphilophus_citrinellus
ENSHCOG00000018819	-	96	34.465	ENSAOCG00000005037	polr3d	92	36.103	Amphiprion_ocellaris
ENSHCOG00000018819	-	94	56.806	ENSAOCG00000007733	zgc:171971	98	55.802	Amphiprion_ocellaris
ENSHCOG00000018819	-	96	33.850	ENSAPEG00000013751	polr3d	92	36.490	Amphiprion_percula
ENSHCOG00000018819	-	94	55.759	ENSAPEG00000016107	zgc:171971	98	54.815	Amphiprion_percula
ENSHCOG00000018819	-	98	52.051	ENSATEG00000023125	zgc:171971	98	53.316	Anabas_testudineus
ENSHCOG00000018819	-	90	33.690	ENSATEG00000023119	polr3d	90	34.930	Anabas_testudineus
ENSHCOG00000018819	-	81	35.530	ENSAPLG00000014393	POLR3D	96	35.244	Anas_platyrhynchos
ENSHCOG00000018819	-	82	34.262	ENSACAG00000010592	POLR3D	84	34.911	Anolis_carolinensis
ENSHCOG00000018819	-	98	35.904	ENSANAG00000030023	POLR3D	91	36.800	Aotus_nancymaae
ENSHCOG00000018819	-	94	33.770	ENSACLG00000010147	polr3d	90	35.635	Astatotilapia_calliptera
ENSHCOG00000018819	-	98	54.242	ENSACLG00000000074	zgc:171971	98	53.985	Astatotilapia_calliptera
ENSHCOG00000018819	-	88	34.865	ENSAMXG00000010079	polr3d	90	36.729	Astyanax_mexicanus
ENSHCOG00000018819	-	88	46.686	ENSAMXG00000019418	zgc:171971	88	46.377	Astyanax_mexicanus
ENSHCOG00000018819	-	98	37.170	ENSBTAG00000010036	POLR3D	91	38.727	Bos_taurus
ENSHCOG00000018819	-	98	36.145	ENSCJAG00000020278	POLR3D	84	37.067	Callithrix_jacchus
ENSHCOG00000018819	-	98	36.627	ENSCAFG00000009455	POLR3D	91	37.867	Canis_familiaris
ENSHCOG00000018819	-	98	36.627	ENSCAFG00020013027	POLR3D	91	37.867	Canis_lupus_dingo
ENSHCOG00000018819	-	98	37.650	ENSCHIG00000012279	POLR3D	91	38.727	Capra_hircus
ENSHCOG00000018819	-	98	36.627	ENSTSYG00000009055	POLR3D	91	37.600	Carlito_syrichta
ENSHCOG00000018819	-	74	36.593	ENSCAPG00000010394	POLR3D	94	36.628	Cavia_aperea
ENSHCOG00000018819	-	98	37.019	ENSCPOG00000003679	POLR3D	91	37.566	Cavia_porcellus
ENSHCOG00000018819	-	98	35.817	ENSCCAG00000019817	POLR3D	91	36.702	Cebus_capucinus
ENSHCOG00000018819	-	98	35.663	ENSCATG00000025950	POLR3D	91	36.533	Cercocebus_atys
ENSHCOG00000018819	-	92	37.150	ENSCLAG00000014993	POLR3D	89	37.838	Chinchilla_lanigera
ENSHCOG00000018819	-	98	35.663	ENSCSAG00000016525	POLR3D	91	36.533	Chlorocebus_sabaeus
ENSHCOG00000018819	-	70	56.098	ENSCHOG00000000228	POLR3D	63	56.098	Choloepus_hoffmanni
ENSHCOG00000018819	-	95	37.470	ENSCPBG00000001313	POLR3D	91	37.467	Chrysemys_picta_bellii
ENSHCOG00000018819	-	85	30.409	ENSCSAVG00000007119	-	88	30.117	Ciona_savignyi
ENSHCOG00000018819	-	98	35.663	ENSCANG00000043589	POLR3D	91	36.533	Colobus_angolensis_palliatus
ENSHCOG00000018819	-	98	35.663	ENSCGRG00001010339	Polr3d	91	36.170	Cricetulus_griseus_chok1gshd
ENSHCOG00000018819	-	98	35.663	ENSCGRG00000003956	Polr3d	91	36.170	Cricetulus_griseus_crigri
ENSHCOG00000018819	-	98	51.813	ENSCSEG00000015509	zgc:171971	98	49.610	Cynoglossus_semilaevis
ENSHCOG00000018819	-	87	32.394	ENSCSEG00000008123	polr3d	91	33.521	Cynoglossus_semilaevis
ENSHCOG00000018819	-	87	44.543	ENSCVAG00000009078	-	91	44.543	Cyprinodon_variegatus
ENSHCOG00000018819	-	88	34.722	ENSCVAG00000020687	polr3d	92	35.342	Cyprinodon_variegatus
ENSHCOG00000018819	-	93	36.675	ENSDARG00000104516	polr3d	93	36.592	Danio_rerio
ENSHCOG00000018819	-	97	43.544	ENSDARG00000042054	zgc:171971	86	45.634	Danio_rerio
ENSHCOG00000018819	-	98	35.545	ENSDNOG00000013488	POLR3D	91	36.870	Dasypus_novemcinctus
ENSHCOG00000018819	-	90	37.692	ENSDORG00000011174	Polr3d	91	38.196	Dipodomys_ordii
ENSHCOG00000018819	-	98	36.211	ENSETEG00000016516	POLR3D	91	38.727	Echinops_telfairi
ENSHCOG00000018819	-	81	33.799	ENSEBUG00000014414	polr3d	99	33.143	Eptatretus_burgeri
ENSHCOG00000018819	-	98	34.856	ENSEASG00005018824	POLR3D	91	36.000	Equus_asinus_asinus
ENSHCOG00000018819	-	98	35.817	ENSECAG00000025090	-	91	37.067	Equus_caballus
ENSHCOG00000018819	-	92	37.121	ENSEEUG00000007632	POLR3D	91	37.566	Erinaceus_europaeus
ENSHCOG00000018819	-	96	45.596	ENSELUG00000017642	zgc:171971	94	45.855	Esox_lucius
ENSHCOG00000018819	-	88	35.519	ENSELUG00000016978	polr3d	92	36.164	Esox_lucius
ENSHCOG00000018819	-	98	36.386	ENSFCAG00000005346	POLR3D	91	37.333	Felis_catus
ENSHCOG00000018819	-	81	36.657	ENSFALG00000010907	POLR3D	96	36.364	Ficedula_albicollis
ENSHCOG00000018819	-	98	35.952	ENSFDAG00000010144	POLR3D	89	37.166	Fukomys_damarensis
ENSHCOG00000018819	-	98	47.301	ENSFHEG00000003803	-	98	47.044	Fundulus_heteroclitus
ENSHCOG00000018819	-	88	35.519	ENSFHEG00000000508	polr3d	93	38.017	Fundulus_heteroclitus
ENSHCOG00000018819	-	88	33.333	ENSGMOG00000006293	polr3d	98	35.310	Gadus_morhua
ENSHCOG00000018819	-	97	45.676	ENSGMOG00000015819	zgc:171971	98	45.405	Gadus_morhua
ENSHCOG00000018819	-	82	37.612	ENSGALG00000032501	-	66	36.527	Gallus_gallus
ENSHCOG00000018819	-	96	34.937	ENSGAFG00000010268	polr3d	99	35.606	Gambusia_affinis
ENSHCOG00000018819	-	87	50.716	ENSGAFG00000009259	zgc:171971	97	48.052	Gambusia_affinis
ENSHCOG00000018819	-	92	52.604	ENSGACG00000015436	zgc:171971	97	53.518	Gasterosteus_aculeatus
ENSHCOG00000018819	-	96	33.590	ENSGACG00000011126	polr3d	99	35.219	Gasterosteus_aculeatus
ENSHCOG00000018819	-	95	37.226	ENSGAGG00000023229	POLR3D	91	37.203	Gopherus_agassizii
ENSHCOG00000018819	-	98	36.386	ENSGGOG00000007302	POLR3D	91	37.333	Gorilla_gorilla
ENSHCOG00000018819	-	98	52.911	ENSHBUG00000020493	zgc:171971	98	56.495	Haplochromis_burtoni
ENSHCOG00000018819	-	94	33.770	ENSHBUG00000012288	polr3d	90	35.635	Haplochromis_burtoni
ENSHCOG00000018819	-	98	36.077	ENSHGLG00000015415	POLR3D	89	36.856	Heterocephalus_glaber_female
ENSHCOG00000018819	-	98	36.077	ENSHGLG00100014950	POLR3D	89	36.856	Heterocephalus_glaber_male
ENSHCOG00000018819	-	85	34.986	ENSIPUG00000003480	polr3d	92	35.989	Ictalurus_punctatus
ENSHCOG00000018819	-	97	43.467	ENSIPUG00000008608	zgc:171971	96	45.063	Ictalurus_punctatus
ENSHCOG00000018819	-	92	37.374	ENSSTOG00000016519	POLR3D	91	37.931	Ictidomys_tridecemlineatus
ENSHCOG00000018819	-	98	36.058	ENSJJAG00000006743	Polr3d	91	36.412	Jaculus_jaculus
ENSHCOG00000018819	-	95	33.161	ENSKMAG00000005145	polr3d	90	38.462	Kryptolebias_marmoratus
ENSHCOG00000018819	-	99	53.165	ENSLBEG00000009545	zgc:171971	99	55.949	Labrus_bergylta
ENSHCOG00000018819	-	90	32.075	ENSLBEG00000003430	polr3d	91	35.278	Labrus_bergylta
ENSHCOG00000018819	-	95	37.500	ENSLACG00000016654	POLR3D	92	37.895	Latimeria_chalumnae
ENSHCOG00000018819	-	86	44.828	ENSLOCG00000006467	zgc:171971	93	45.597	Lepisosteus_oculatus
ENSHCOG00000018819	-	88	36.585	ENSLOCG00000016080	polr3d	93	37.127	Lepisosteus_oculatus
ENSHCOG00000018819	-	98	36.930	ENSLAFG00000001562	POLR3D	91	38.158	Loxodonta_africana
ENSHCOG00000018819	-	98	35.663	ENSMFAG00000029141	POLR3D	91	36.533	Macaca_fascicularis
ENSHCOG00000018819	-	98	35.663	ENSMMUG00000023226	POLR3D	91	36.533	Macaca_mulatta
ENSHCOG00000018819	-	98	35.663	ENSMNEG00000039410	POLR3D	91	36.533	Macaca_nemestrina
ENSHCOG00000018819	-	98	35.663	ENSMLEG00000031413	POLR3D	91	36.533	Mandrillus_leucophaeus
ENSHCOG00000018819	-	98	55.243	ENSMAMG00000020617	zgc:171971	99	54.987	Mastacembelus_armatus
ENSHCOG00000018819	-	90	34.332	ENSMAMG00000008914	polr3d	93	34.807	Mastacembelus_armatus
ENSHCOG00000018819	-	94	33.770	ENSMZEG00005011442	polr3d	90	35.635	Maylandia_zebra
ENSHCOG00000018819	-	98	54.242	ENSMZEG00005003175	zgc:171971	98	53.985	Maylandia_zebra
ENSHCOG00000018819	-	98	35.096	ENSMAUG00000006844	Polr3d	91	36.267	Mesocricetus_auratus
ENSHCOG00000018819	-	98	36.627	ENSMICG00000001049	POLR3D	91	37.867	Microcebus_murinus
ENSHCOG00000018819	-	98	35.181	ENSMOCG00000005195	Polr3d	91	36.000	Microtus_ochrogaster
ENSHCOG00000018819	-	88	37.006	ENSMMOG00000013845	polr3d	99	36.911	Mola_mola
ENSHCOG00000018819	-	94	35.661	ENSMODG00000009491	POLR3D	96	35.770	Monodelphis_domestica
ENSHCOG00000018819	-	99	55.190	ENSMALG00000005659	zgc:171971	98	56.171	Monopterus_albus
ENSHCOG00000018819	-	87	33.889	ENSMALG00000002928	polr3d	97	34.949	Monopterus_albus
ENSHCOG00000018819	-	98	35.663	MGP_CAROLIEiJ_G0019481	Polr3d	91	36.533	Mus_caroli
ENSHCOG00000018819	-	98	35.663	ENSMUSG00000000776	Polr3d	91	36.533	Mus_musculus
ENSHCOG00000018819	-	98	35.872	MGP_PahariEiJ_G0030498	Polr3d	90	36.785	Mus_pahari
ENSHCOG00000018819	-	98	35.904	MGP_SPRETEiJ_G0020373	Polr3d	91	36.800	Mus_spretus
ENSHCOG00000018819	-	98	37.170	ENSMPUG00000003653	POLR3D	91	38.196	Mustela_putorius_furo
ENSHCOG00000018819	-	92	37.879	ENSMLUG00000002109	POLR3D	91	38.095	Myotis_lucifugus
ENSHCOG00000018819	-	92	36.041	ENSNGAG00000013872	Polr3d	98	34.639	Nannospalax_galili
ENSHCOG00000018819	-	87	49.280	ENSNBRG00000022951	zgc:171971	91	49.713	Neolamprologus_brichardi
ENSHCOG00000018819	-	94	34.872	ENSNBRG00000019106	polr3d	90	36.389	Neolamprologus_brichardi
ENSHCOG00000018819	-	94	36.476	ENSMEUG00000000465	POLR3D	91	37.037	Notamacropus_eugenii
ENSHCOG00000018819	-	92	37.150	ENSOPRG00000013146	POLR3D	91	37.867	Ochotona_princeps
ENSHCOG00000018819	-	92	37.215	ENSODEG00000005884	POLR3D	91	37.037	Octodon_degus
ENSHCOG00000018819	-	98	51.026	ENSONIG00000007280	zgc:171971	90	56.461	Oreochromis_niloticus
ENSHCOG00000018819	-	91	34.409	ENSONIG00000010634	polr3d	90	35.635	Oreochromis_niloticus
ENSHCOG00000018819	-	63	58.442	ENSOANG00000010776	POLR3D	83	35.838	Ornithorhynchus_anatinus
ENSHCOG00000018819	-	92	36.776	ENSOCUG00000017410	POLR3D	91	38.196	Oryctolagus_cuniculus
ENSHCOG00000018819	-	91	34.946	ENSORLG00000011583	polr3d	93	35.311	Oryzias_latipes
ENSHCOG00000018819	-	91	34.771	ENSORLG00020005668	polr3d	91	35.574	Oryzias_latipes_hni
ENSHCOG00000018819	-	91	35.097	ENSORLG00015020291	polr3d	90	35.174	Oryzias_latipes_hsok
ENSHCOG00000018819	-	88	34.521	ENSOMEG00000010120	polr3d	98	33.249	Oryzias_melastigma
ENSHCOG00000018819	-	95	36.275	ENSOGAG00000004912	POLR3D	91	36.870	Otolemur_garnettii
ENSHCOG00000018819	-	99	37.116	ENSOARG00000010372	-	73	38.642	Ovis_aries
ENSHCOG00000018819	-	98	36.386	ENSPPAG00000029591	POLR3D	91	37.333	Pan_paniscus
ENSHCOG00000018819	-	98	36.386	ENSPPRG00000022827	POLR3D	91	37.333	Panthera_pardus
ENSHCOG00000018819	-	98	36.386	ENSPTIG00000018239	POLR3D	91	37.333	Panthera_tigris_altaica
ENSHCOG00000018819	-	98	36.386	ENSPTRG00000020056	POLR3D	91	37.333	Pan_troglodytes
ENSHCOG00000018819	-	98	35.663	ENSPANG00000009440	POLR3D	91	36.533	Papio_anubis
ENSHCOG00000018819	-	86	44.160	ENSPKIG00000025283	zgc:171971	86	44.160	Paramormyrops_kingsleyae
ENSHCOG00000018819	-	92	32.391	ENSPKIG00000006727	polr3d	90	34.973	Paramormyrops_kingsleyae
ENSHCOG00000018819	-	95	35.731	ENSPSIG00000006113	POLR3D	91	35.844	Pelodiscus_sinensis
ENSHCOG00000018819	-	95	33.506	ENSPMGG00000021658	polr3d	99	36.412	Periophthalmus_magnuspinnatus
ENSHCOG00000018819	-	98	34.940	ENSPEMG00000023314	Polr3d	91	36.533	Peromyscus_maniculatus_bairdii
ENSHCOG00000018819	-	95	31.294	ENSPMAG00000001455	polr3d	90	32.746	Petromyzon_marinus
ENSHCOG00000018819	-	94	36.228	ENSPCIG00000012699	POLR3D	91	36.772	Phascolarctos_cinereus
ENSHCOG00000018819	-	98	49.357	ENSPFOG00000011089	zgc:171971	98	49.100	Poecilia_formosa
ENSHCOG00000018819	-	96	34.184	ENSPFOG00000012698	polr3d	99	34.860	Poecilia_formosa
ENSHCOG00000018819	-	96	33.929	ENSPLAG00000008149	polr3d	99	34.860	Poecilia_latipinna
ENSHCOG00000018819	-	87	48.348	ENSPLAG00000003645	zgc:171971	97	45.576	Poecilia_latipinna
ENSHCOG00000018819	-	98	48.843	ENSPMEG00000016953	zgc:171971	98	48.586	Poecilia_mexicana
ENSHCOG00000018819	-	96	34.177	ENSPMEG00000002702	polr3d	99	34.848	Poecilia_mexicana
ENSHCOG00000018819	-	98	48.329	ENSPREG00000003755	-	98	48.072	Poecilia_reticulata
ENSHCOG00000018819	-	96	33.838	ENSPREG00000007593	polr3d	90	35.000	Poecilia_reticulata
ENSHCOG00000018819	-	98	36.058	ENSPPYG00000018419	POLR3D	91	36.968	Pongo_abelii
ENSHCOG00000018819	-	94	36.524	ENSPCAG00000001971	POLR3D	91	37.568	Procavia_capensis
ENSHCOG00000018819	-	98	36.627	ENSPCOG00000028134	POLR3D	91	37.600	Propithecus_coquereli
ENSHCOG00000018819	-	98	36.386	ENSPVAG00000009873	POLR3D	91	37.067	Pteropus_vampyrus
ENSHCOG00000018819	-	87	51.136	ENSPNYG00000008902	zgc:171971	88	51.136	Pundamilia_nyererei
ENSHCOG00000018819	-	94	33.508	ENSPNYG00000016306	polr3d	90	35.359	Pundamilia_nyererei
ENSHCOG00000018819	-	90	45.810	ENSPNAG00000018934	zgc:171971	89	44.986	Pygocentrus_nattereri
ENSHCOG00000018819	-	88	32.432	ENSPNAG00000022324	polr3d	92	36.314	Pygocentrus_nattereri
ENSHCOG00000018819	-	98	35.422	ENSRNOG00000010028	Polr3d	91	36.267	Rattus_norvegicus
ENSHCOG00000018819	-	98	35.663	ENSRBIG00000035406	POLR3D	91	36.533	Rhinopithecus_bieti
ENSHCOG00000018819	-	98	35.663	ENSRROG00000037278	POLR3D	91	36.533	Rhinopithecus_roxellana
ENSHCOG00000018819	-	98	35.817	ENSSBOG00000024956	POLR3D	91	36.702	Saimiri_boliviensis_boliviensis
ENSHCOG00000018819	-	72	36.808	ENSSHAG00000018257	POLR3D	96	35.965	Sarcophilus_harrisii
ENSHCOG00000018819	-	88	33.062	ENSSFOG00015010611	polr3d	90	35.870	Scleropages_formosus
ENSHCOG00000018819	-	90	44.868	ENSSFOG00015011547	zgc:171971	86	46.984	Scleropages_formosus
ENSHCOG00000018819	-	89	34.943	ENSSMAG00000006271	polr3d	93	36.464	Scophthalmus_maximus
ENSHCOG00000018819	-	98	56.923	ENSSMAG00000001465	zgc:171971	98	56.266	Scophthalmus_maximus
ENSHCOG00000018819	-	96	32.564	ENSSDUG00000020718	polr3d	91	36.389	Seriola_dumerili
ENSHCOG00000018819	-	99	54.750	ENSSDUG00000016019	zgc:171971	99	56.000	Seriola_dumerili
ENSHCOG00000018819	-	96	32.821	ENSSLDG00000009643	polr3d	91	36.011	Seriola_lalandi_dorsalis
ENSHCOG00000018819	-	99	54.750	ENSSLDG00000015968	zgc:171971	99	56.000	Seriola_lalandi_dorsalis
ENSHCOG00000018819	-	98	35.980	ENSSARG00000012844	POLR3D	91	36.074	Sorex_araneus
ENSHCOG00000018819	-	95	37.108	ENSSPUG00000000719	POLR3D	91	37.047	Sphenodon_punctatus
ENSHCOG00000018819	-	88	33.795	ENSSPAG00000023326	polr3d	92	35.989	Stegastes_partitus
ENSHCOG00000018819	-	99	54.692	ENSSPAG00000010384	zgc:171971	98	53.175	Stegastes_partitus
ENSHCOG00000018819	-	98	37.410	ENSSSCG00000009622	POLR3D	91	38.684	Sus_scrofa
ENSHCOG00000018819	-	95	35.219	ENSTRUG00000003555	polr3d	99	35.917	Takifugu_rubripes
ENSHCOG00000018819	-	96	34.536	ENSTNIG00000006282	polr3d	96	36.387	Tetraodon_nigroviridis
ENSHCOG00000018819	-	98	37.108	ENSTTRG00000012745	POLR3D	91	38.095	Tursiops_truncatus
ENSHCOG00000018819	-	88	34.037	ENSUAMG00000026868	POLR3D	89	35.398	Ursus_americanus
ENSHCOG00000018819	-	98	36.867	ENSUMAG00000005099	POLR3D	91	38.133	Ursus_maritimus
ENSHCOG00000018819	-	98	36.627	ENSVVUG00000005290	POLR3D	91	37.867	Vulpes_vulpes
ENSHCOG00000018819	-	93	35.990	ENSXETG00000010534	polr3d	92	37.330	Xenopus_tropicalis
ENSHCOG00000018819	-	86	34.884	ENSXCOG00000015872	polr3d	90	35.897	Xiphophorus_couchianus
ENSHCOG00000018819	-	87	49.857	ENSXMAG00000014555	-	97	47.273	Xiphophorus_maculatus
ENSHCOG00000018819	-	96	32.741	ENSXMAG00000001872	polr3d	91	36.011	Xiphophorus_maculatus