EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000018847 (Gene tree)
Gene ID: -
Gene Symbol: sharpin
Alias: sipl1
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 15549 bases
Position: chrKV880105.1:4250597-4266145
Accession: 109521350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015239	zf-RanBP	PF00641.18	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027971	-	1083	-	ENSHCOP00000027165	360 (aa)	-	-
ENSHCOT00000023068	-	858	-	ENSHCOP00000015207	285 (aa)	-	-
ENSHCOT00000027993	-	1473	XM_019879179	ENSHCOP00000015239	490 (aa)	XP_019734738	-

Gene Model

Click here to download ENSHCOG00000018847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018847	sharpin	80	72.494	ENSAPOG00000023352	sharpin	95	73.206	Acanthochromis_polyacanthus
ENSHCOG00000018847	sharpin	80	55.399	ENSAPOG00000022737	shrprbck1r	60	55.399	Acanthochromis_polyacanthus
ENSHCOG00000018847	sharpin	84	51.570	ENSACIG00000002184	shrprbck1r	92	49.660	Amphilophus_citrinellus
ENSHCOG00000018847	sharpin	80	72.727	ENSAOCG00000017464	sharpin	95	73.445	Amphiprion_ocellaris
ENSHCOG00000018847	sharpin	80	54.801	ENSAOCG00000002890	shrprbck1r	60	54.333	Amphiprion_ocellaris
ENSHCOG00000018847	sharpin	80	72.727	ENSAPEG00000004049	sharpin	95	73.445	Amphiprion_percula
ENSHCOG00000018847	sharpin	80	54.588	ENSAPEG00000023274	shrprbck1r	59	54.588	Amphiprion_percula
ENSHCOG00000018847	sharpin	80	54.286	ENSATEG00000014561	shrprbck1r	59	54.762	Anabas_testudineus
ENSHCOG00000018847	sharpin	81	72.558	ENSATEG00000007832	sharpin	88	73.381	Anabas_testudineus
ENSHCOG00000018847	sharpin	84	52.262	ENSACLG00000022609	shrprbck1r	62	51.794	Astatotilapia_calliptera
ENSHCOG00000018847	sharpin	63	50.804	ENSACLG00000020160	-	85	49.679	Astatotilapia_calliptera
ENSHCOG00000018847	sharpin	80	55.000	ENSAMXG00000021016	shrprbck1r	66	54.773	Astyanax_mexicanus
ENSHCOG00000018847	sharpin	76	55.065	ENSAMXG00000006229	sharpin	99	53.766	Astyanax_mexicanus
ENSHCOG00000018847	sharpin	80	50.827	ENSCSEG00000011306	shrprbck1r	59	51.790	Cynoglossus_semilaevis
ENSHCOG00000018847	sharpin	81	51.732	ENSCVAG00000007250	shrprbck1r	61	51.628	Cyprinodon_variegatus
ENSHCOG00000018847	sharpin	81	67.217	ENSCVAG00000006586	sharpin	96	66.903	Cyprinodon_variegatus
ENSHCOG00000018847	sharpin	80	56.351	ENSDARG00000059871	shrprbck1r	90	54.965	Danio_rerio
ENSHCOG00000018847	sharpin	77	53.865	ENSDARG00000076995	sharpin	97	54.082	Danio_rerio
ENSHCOG00000018847	sharpin	80	56.731	ENSELUG00000016022	shrprbck1r	59	56.386	Esox_lucius
ENSHCOG00000018847	sharpin	80	66.745	ENSFHEG00000013564	sharpin	95	67.548	Fundulus_heteroclitus
ENSHCOG00000018847	sharpin	68	73.684	ENSGMOG00000010123	sharpin	91	73.684	Gadus_morhua
ENSHCOG00000018847	sharpin	79	55.860	ENSGAFG00000021405	sharpin	95	55.860	Gambusia_affinis
ENSHCOG00000018847	sharpin	81	53.991	ENSGAFG00000009309	shrprbck1r	62	51.936	Gambusia_affinis
ENSHCOG00000018847	sharpin	84	52.466	ENSHBUG00000021933	shrprbck1r	62	52.018	Haplochromis_burtoni
ENSHCOG00000018847	sharpin	74	55.228	ENSIPUG00000011951	sharpin	99	54.155	Ictalurus_punctatus
ENSHCOG00000018847	sharpin	81	53.810	ENSIPUG00000014247	shrprbck1r	58	52.278	Ictalurus_punctatus
ENSHCOG00000018847	sharpin	80	51.606	ENSKMAG00000015215	shrprbck1r	61	51.716	Kryptolebias_marmoratus
ENSHCOG00000018847	sharpin	89	64.795	ENSKMAG00000015204	sharpin	85	64.795	Kryptolebias_marmoratus
ENSHCOG00000018847	sharpin	80	72.093	ENSLBEG00000016624	sharpin	96	73.031	Labrus_bergylta
ENSHCOG00000018847	sharpin	80	52.304	ENSLBEG00000016876	shrprbck1r	60	53.521	Labrus_bergylta
ENSHCOG00000018847	sharpin	78	45.098	ENSLACG00000010948	-	60	44.608	Latimeria_chalumnae
ENSHCOG00000018847	sharpin	80	58.392	ENSLOCG00000008910	shrprbck1r	60	57.820	Lepisosteus_oculatus
ENSHCOG00000018847	sharpin	80	52.506	ENSMAMG00000022930	shrprbck1r	60	52.969	Mastacembelus_armatus
ENSHCOG00000018847	sharpin	80	50.495	ENSMAMG00000014645	sharpin	95	50.877	Mastacembelus_armatus
ENSHCOG00000018847	sharpin	84	52.018	ENSMZEG00005021257	shrprbck1r	62	51.794	Maylandia_zebra
ENSHCOG00000018847	sharpin	80	52.887	ENSMMOG00000003764	shrprbck1r	59	52.765	Mola_mola
ENSHCOG00000018847	sharpin	67	70.833	ENSMMOG00000016788	sharpin	92	70.833	Mola_mola
ENSHCOG00000018847	sharpin	75	54.476	ENSMALG00000008861	shrprbck1r	55	54.220	Monopterus_albus
ENSHCOG00000018847	sharpin	80	49.057	ENSMALG00000020528	sharpin	95	46.279	Monopterus_albus
ENSHCOG00000018847	sharpin	84	51.570	ENSNBRG00000002270	shrprbck1r	62	51.345	Neolamprologus_brichardi
ENSHCOG00000018847	sharpin	63	62.379	ENSNBRG00000012382	sharpin	92	62.379	Neolamprologus_brichardi
ENSHCOG00000018847	sharpin	84	52.477	ENSONIG00000014401	shrprbck1r	62	52.370	Oreochromis_niloticus
ENSHCOG00000018847	sharpin	75	69.975	ENSONIG00000009626	-	97	69.697	Oreochromis_niloticus
ENSHCOG00000018847	sharpin	80	70.944	ENSORLG00000017281	sharpin	95	70.702	Oryzias_latipes
ENSHCOG00000018847	sharpin	80	51.168	ENSORLG00000007392	shrprbck1r	60	51.059	Oryzias_latipes
ENSHCOG00000018847	sharpin	80	71.359	ENSORLG00020000801	sharpin	97	70.000	Oryzias_latipes_hni
ENSHCOG00000018847	sharpin	80	50.935	ENSORLG00020018619	shrprbck1r	60	50.824	Oryzias_latipes_hni
ENSHCOG00000018847	sharpin	80	51.163	ENSORLG00015018865	shrprbck1r	60	50.820	Oryzias_latipes_hsok
ENSHCOG00000018847	sharpin	80	71.359	ENSORLG00015009860	sharpin	95	71.117	Oryzias_latipes_hsok
ENSHCOG00000018847	sharpin	80	58.647	ENSOMEG00000005729	sharpin	89	58.647	Oryzias_melastigma
ENSHCOG00000018847	sharpin	80	52.582	ENSOMEG00000012749	shrprbck1r	60	51.765	Oryzias_melastigma
ENSHCOG00000018847	sharpin	79	62.019	ENSPKIG00000006933	shrprbck1r	59	61.707	Paramormyrops_kingsleyae
ENSHCOG00000018847	sharpin	80	59.524	ENSPKIG00000018308	-	88	60.095	Paramormyrops_kingsleyae
ENSHCOG00000018847	sharpin	80	50.602	ENSPMGG00000013254	shrprbck1r	59	50.976	Periophthalmus_magnuspinnatus
ENSHCOG00000018847	sharpin	62	73.684	ENSPMGG00000019318	sharpin	94	73.810	Periophthalmus_magnuspinnatus
ENSHCOG00000018847	sharpin	81	53.738	ENSPFOG00000004214	shrprbck1r	89	53.318	Poecilia_formosa
ENSHCOG00000018847	sharpin	81	67.281	ENSPFOG00000015253	sharpin	96	68.085	Poecilia_formosa
ENSHCOG00000018847	sharpin	81	67.051	ENSPLAG00000000423	sharpin	96	67.849	Poecilia_latipinna
ENSHCOG00000018847	sharpin	81	53.738	ENSPLAG00000020523	shrprbck1r	60	52.804	Poecilia_latipinna
ENSHCOG00000018847	sharpin	81	53.271	ENSPMEG00000006877	shrprbck1r	60	52.804	Poecilia_mexicana
ENSHCOG00000018847	sharpin	81	54.433	ENSPMEG00000023030	sharpin	91	51.106	Poecilia_mexicana
ENSHCOG00000018847	sharpin	81	66.897	ENSPREG00000009702	sharpin	96	67.689	Poecilia_reticulata
ENSHCOG00000018847	sharpin	81	53.630	ENSPREG00000014689	shrprbck1r	60	53.162	Poecilia_reticulata
ENSHCOG00000018847	sharpin	84	52.018	ENSPNYG00000022601	shrprbck1r	62	51.794	Pundamilia_nyererei
ENSHCOG00000018847	sharpin	80	55.000	ENSPNAG00000007847	shrprbck1r	60	54.338	Pygocentrus_nattereri
ENSHCOG00000018847	sharpin	74	54.960	ENSPNAG00000002911	sharpin	99	54.545	Pygocentrus_nattereri
ENSHCOG00000018847	sharpin	80	53.007	ENSSFOG00015004028	sharpin	93	52.784	Scleropages_formosus
ENSHCOG00000018847	sharpin	80	53.132	ENSSMAG00000018085	shrprbck1r	60	53.132	Scophthalmus_maximus
ENSHCOG00000018847	sharpin	80	58.981	ENSSDUG00000019039	sharpin	95	56.429	Seriola_dumerili
ENSHCOG00000018847	sharpin	80	54.225	ENSSDUG00000002959	shrprbck1r	60	54.481	Seriola_dumerili
ENSHCOG00000018847	sharpin	80	53.882	ENSSLDG00000009026	shrprbck1r	60	54.009	Seriola_lalandi_dorsalis
ENSHCOG00000018847	sharpin	80	54.483	ENSSPAG00000016097	shrprbck1r	61	54.651	Stegastes_partitus
ENSHCOG00000018847	sharpin	67	55.793	ENSSPAG00000021807	sharpin	96	55.793	Stegastes_partitus
ENSHCOG00000018847	sharpin	80	66.256	ENSTRUG00000011046	sharpin	96	65.517	Takifugu_rubripes
ENSHCOG00000018847	sharpin	80	52.009	ENSTRUG00000006949	shrprbck1r	58	52.009	Takifugu_rubripes
ENSHCOG00000018847	sharpin	77	70.051	ENSTNIG00000008521	sharpin	97	69.036	Tetraodon_nigroviridis
ENSHCOG00000018847	sharpin	81	53.995	ENSXCOG00000015019	sharpin	98	52.206	Xiphophorus_couchianus
ENSHCOG00000018847	sharpin	81	53.081	ENSXCOG00000006701	shrprbck1r	59	52.844	Xiphophorus_couchianus
ENSHCOG00000018847	sharpin	81	52.844	ENSXMAG00000018972	shrprbck1r	59	52.607	Xiphophorus_maculatus
ENSHCOG00000018847	sharpin	81	66.359	ENSXMAG00000022076	sharpin	96	67.139	Xiphophorus_maculatus