EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000018918 (Gene tree)
Gene ID
109510803
Gene Symbol
srsf1a
Alias
sfrs1a|sfrs1l|wu:fb52g10|wu:fb97g12|zgc:66146
Full Name
serine and arginine rich splicing factor 1
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Plus strand
Length
3658 bases
Position
chrKV880533.1:689311-692968
Accession
109510803
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000015332RRM_1PF00076.222.6e-3112
ENSHCOP00000015332RRM_1PF00076.222.6e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000023226-1147XM_019861395ENSHCOP00000015332256 (aa)XP_019716954UPI00094E285A
Gene Model
Click here to download ENSHCOG00000018918's gene model file
Pathways
Pathway IDPathway NameSource
hcq03040SpliceosomeKEGG
hcq05168Herpes simplex virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018918's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000018918srsf1a6643.529ENSHCOG00000002740srsf6a5144.578
ENSHCOG00000018918srsf1a7779.397ENSHCOG00000008016-7777.889
ENSHCOG00000018918srsf1a6642.135ENSHCOG00000017557srsf5a8533.460
ENSHCOG00000018918srsf1a7149.189ENSHCOG00000017311srsf97647.340
ENSHCOG00000018918srsf1a6446.857ENSHCOG00000005592srsf5b5844.318
ENSHCOG00000018918srsf1a6645.614ENSHCOG00000012540srsf46244.253
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000018918srsf1a9781.928ENSG00000136450SRSF19590.323Homo_sapiens
ENSHCOG00000018918srsf1a7891.457ENSAPOG00000002748-7988.945Acanthochromis_polyacanthus
ENSHCOG00000018918srsf1a7787.940ENSAPOG00000008542-8087.940Acanthochromis_polyacanthus
ENSHCOG00000018918srsf1a7784.264ENSAMEG00000002635SRSF17785.279Ailuropoda_melanoleuca
ENSHCOG00000018918srsf1a8886.161ENSACIG00000008091srsf1a8389.950Amphilophus_citrinellus
ENSHCOG00000018918srsf1a8886.607ENSAOCG00000010671-8490.452Amphiprion_ocellaris
ENSHCOG00000018918srsf1a7787.940ENSAOCG00000000337-8087.940Amphiprion_ocellaris
ENSHCOG00000018918srsf1a8886.607ENSAPEG00000009915-8490.452Amphiprion_percula
ENSHCOG00000018918srsf1a7787.940ENSAPEG00000023352-7987.940Amphiprion_percula
ENSHCOG00000018918srsf1a7891.960ENSATEG00000022403-7890.452Anabas_testudineus
ENSHCOG00000018918srsf1a8081.863ENSATEG00000021567-8081.818Anabas_testudineus
ENSHCOG00000018918srsf1a7786.802ENSACAG00000005542-7886.294Anolis_carolinensis
ENSHCOG00000018918srsf1a9781.928ENSANAG00000020583-9588.406Aotus_nancymaae
ENSHCOG00000018918srsf1a7865.500ENSANAG00000025417-7365.482Aotus_nancymaae
ENSHCOG00000018918srsf1a7886.070ENSAMXG00000035996srsf1a8087.065Astyanax_mexicanus
ENSHCOG00000018918srsf1a5476.129ENSAMXG00000024373-7278.065Astyanax_mexicanus
ENSHCOG00000018918srsf1a9781.928ENSBTAG00000014766SRSF17887.310Bos_taurus
ENSHCOG00000018918srsf1a7780.711ENSCJAG00000008111-8677.665Callithrix_jacchus
ENSHCOG00000018918srsf1a9781.928ENSCJAG00000041713-9588.406Callithrix_jacchus
ENSHCOG00000018918srsf1a9781.928ENSCAFG00000017430SRSF17687.310Canis_familiaris
ENSHCOG00000018918srsf1a9781.928ENSCAFG00020025632-7687.310Canis_lupus_dingo
ENSHCOG00000018918srsf1a7787.817ENSCHIG00000010787SRSF17887.310Capra_hircus
ENSHCOG00000018918srsf1a9781.928ENSTSYG00000013899-9588.406Carlito_syrichta
ENSHCOG00000018918srsf1a9781.928ENSCPOG00000032681-7887.310Cavia_porcellus
ENSHCOG00000018918srsf1a9781.928ENSCCAG00000029484-9588.406Cebus_capucinus
ENSHCOG00000018918srsf1a9781.928ENSCATG00000042294-9588.406Cercocebus_atys
ENSHCOG00000018918srsf1a9781.928ENSCLAG00000014707-7887.310Chinchilla_lanigera
ENSHCOG00000018918srsf1a9880.800ENSCSAG00000005642-7686.294Chlorocebus_sabaeus
ENSHCOG00000018918srsf1a7787.817ENSCHOG00000001899SRSF17887.310Choloepus_hoffmanni
ENSHCOG00000018918srsf1a9781.526ENSCPBG00000009851-7886.802Chrysemys_picta_bellii
ENSHCOG00000018918srsf1a9781.928ENSCANG00000029726-9588.406Colobus_angolensis_palliatus
ENSHCOG00000018918srsf1a9781.928ENSCGRG00001000670Srsf17687.310Cricetulus_griseus_chok1gshd
ENSHCOG00000018918srsf1a9781.928ENSCGRG00000005590Srsf17887.310Cricetulus_griseus_crigri
ENSHCOG00000018918srsf1a7893.467ENSCSEG00000014272-7990.955Cynoglossus_semilaevis
ENSHCOG00000018918srsf1a7781.731ENSCSEG00000009973-7980.769Cynoglossus_semilaevis
ENSHCOG00000018918srsf1a7884.925ENSCVAG00000005458-9283.422Cyprinodon_variegatus
ENSHCOG00000018918srsf1a7891.960ENSCVAG00000018617-7990.452Cyprinodon_variegatus
ENSHCOG00000018918srsf1a7885.500ENSDARG00000017843srsf1b8084.500Danio_rerio
ENSHCOG00000018918srsf1a7884.951ENSDARG00000057691srsf1a10083.420Danio_rerio
ENSHCOG00000018918srsf1a9781.928ENSDNOG00000011737-7687.310Dasypus_novemcinctus
ENSHCOG00000018918srsf1a9781.928ENSDORG00000015082Srsf17887.310Dipodomys_ordii
ENSHCOG00000018918srsf1a7284.783ENSETEG00000005349-6287.500Echinops_telfairi
ENSHCOG00000018918srsf1a9781.928ENSEASG00005002922-7687.310Equus_asinus_asinus
ENSHCOG00000018918srsf1a7787.817ENSECAG00000016654SRSF17887.310Equus_caballus
ENSHCOG00000018918srsf1a7285.870ENSEEUG00000009255-6288.587Erinaceus_europaeus
ENSHCOG00000018918srsf1a7889.000ENSELUG00000021646srsf1a7886.000Esox_lucius
ENSHCOG00000018918srsf1a9781.928ENSFCAG00000002250-9088.108Felis_catus
ENSHCOG00000018918srsf1a7592.453ENSFALG00000005062-7671.574Ficedula_albicollis
ENSHCOG00000018918srsf1a9781.928ENSFDAG00000010646-7887.310Fukomys_damarensis
ENSHCOG00000018918srsf1a8886.607ENSFHEG00000003174srsf1a8490.452Fundulus_heteroclitus
ENSHCOG00000018918srsf1a7985.644ENSGMOG00000014787-8082.234Gadus_morhua
ENSHCOG00000018918srsf1a7788.325ENSGALG00000005525SRSF17886.802Gallus_gallus
ENSHCOG00000018918srsf1a7782.741ENSGACG00000020621srsf1b7880.203Gasterosteus_aculeatus
ENSHCOG00000018918srsf1a9781.526ENSGAGG00000022965-7686.802Gopherus_agassizii
ENSHCOG00000018918srsf1a9781.928ENSGGOG00000004386SRSF19588.406Gorilla_gorilla
ENSHCOG00000018918srsf1a8886.161ENSHBUG00000016788srsf1a8189.950Haplochromis_burtoni
ENSHCOG00000018918srsf1a6686.905ENSHGLG00000000669-7686.310Heterocephalus_glaber_female
ENSHCOG00000018918srsf1a6686.905ENSHGLG00000000600-7686.310Heterocephalus_glaber_female
ENSHCOG00000018918srsf1a9781.928ENSHGLG00100016906-7887.310Heterocephalus_glaber_male
ENSHCOG00000018918srsf1a7787.817ENSIPUG00000008750srsf1b7884.772Ictalurus_punctatus
ENSHCOG00000018918srsf1a7887.065ENSIPUG00000017039srsf1a8089.055Ictalurus_punctatus
ENSHCOG00000018918srsf1a9781.928ENSSTOG00000000243-9684.264Ictidomys_tridecemlineatus
ENSHCOG00000018918srsf1a5077.953ENSJJAG00000014464-9279.688Jaculus_jaculus
ENSHCOG00000018918srsf1a9781.928ENSJJAG00000000102-7887.310Jaculus_jaculus
ENSHCOG00000018918srsf1a7892.462ENSKMAG00000019232srsf1a7989.447Kryptolebias_marmoratus
ENSHCOG00000018918srsf1a8885.714ENSLBEG00000020864-8489.447Labrus_bergylta
ENSHCOG00000018918srsf1a7779.695ENSLBEG00000015294-7977.665Labrus_bergylta
ENSHCOG00000018918srsf1a7784.772ENSLACG00000014160srsf1a7283.249Latimeria_chalumnae
ENSHCOG00000018918srsf1a7787.310ENSLOCG00000005994srsf1a7884.264Lepisosteus_oculatus
ENSHCOG00000018918srsf1a7787.817ENSLAFG00000025743SRSF17887.310Loxodonta_africana
ENSHCOG00000018918srsf1a9781.928ENSMFAG00000040003-9588.406Macaca_fascicularis
ENSHCOG00000018918srsf1a9879.200ENSMMUG00000003260-9384.264Macaca_mulatta
ENSHCOG00000018918srsf1a9781.928ENSMMUG00000004725SRSF19588.406Macaca_mulatta
ENSHCOG00000018918srsf1a9879.600ENSMNEG00000015983-7685.279Macaca_nemestrina
ENSHCOG00000018918srsf1a9781.928ENSMNEG00000027680-9588.406Macaca_nemestrina
ENSHCOG00000018918srsf1a9876.400ENSMLEG00000015243-7682.234Mandrillus_leucophaeus
ENSHCOG00000018918srsf1a7787.817ENSMLEG00000040509SRSF17887.310Mandrillus_leucophaeus
ENSHCOG00000018918srsf1a7784.264ENSMAMG00000019687-7883.249Mastacembelus_armatus
ENSHCOG00000018918srsf1a7891.960ENSMAMG00000018454-7990.452Mastacembelus_armatus
ENSHCOG00000018918srsf1a7788.325ENSMAMG00000019691-8085.787Mastacembelus_armatus
ENSHCOG00000018918srsf1a9781.928ENSMAUG00000021845Srsf17887.310Mesocricetus_auratus
ENSHCOG00000018918srsf1a9781.928ENSMICG00000013639-9588.406Microcebus_murinus
ENSHCOG00000018918srsf1a9781.928ENSMOCG00000001996Srsf17887.310Microtus_ochrogaster
ENSHCOG00000018918srsf1a8886.161ENSMMOG00000014354srsf1a8489.447Mola_mola
ENSHCOG00000018918srsf1a7290.761ENSMODG00000014781-6290.761Monodelphis_domestica
ENSHCOG00000018918srsf1a8075.490ENSMALG00000007763-7776.650Monopterus_albus
ENSHCOG00000018918srsf1a7891.960ENSMALG00000017129-7688.945Monopterus_albus
ENSHCOG00000018918srsf1a9781.928MGP_CAROLIEiJ_G0016943Srsf19088.108Mus_caroli
ENSHCOG00000018918srsf1a9781.928ENSMUSG00000018379Srsf19088.108Mus_musculus
ENSHCOG00000018918srsf1a9781.928MGP_PahariEiJ_G0018074Srsf17095.946Mus_pahari
ENSHCOG00000018918srsf1a9781.928MGP_SPRETEiJ_G0017790Srsf19088.108Mus_spretus
ENSHCOG00000018918srsf1a7787.817ENSMPUG00000015369SRSF17887.310Mustela_putorius_furo
ENSHCOG00000018918srsf1a7787.817ENSMLUG00000011040SRSF17887.310Myotis_lucifugus
ENSHCOG00000018918srsf1a7980.788ENSMLUG00000023995-7780.711Myotis_lucifugus
ENSHCOG00000018918srsf1a7787.817ENSNGAG00000011395Srsf17887.310Nannospalax_galili
ENSHCOG00000018918srsf1a9970.356ENSNBRG00000008041srsf1b7876.142Neolamprologus_brichardi
ENSHCOG00000018918srsf1a9781.928ENSNLEG00000008088-9588.406Nomascus_leucogenys
ENSHCOG00000018918srsf1a5386.029ENSOPRG00000001234-7285.294Ochotona_princeps
ENSHCOG00000018918srsf1a9781.928ENSODEG00000011481-7887.310Octodon_degus
ENSHCOG00000018918srsf1a7891.457ENSONIG00000013160-7889.500Oreochromis_niloticus
ENSHCOG00000018918srsf1a7887.500ENSONIG00000004860-7984.772Oreochromis_niloticus
ENSHCOG00000018918srsf1a9463.223ENSOCUG00000010894-7567.692Oryctolagus_cuniculus
ENSHCOG00000018918srsf1a7891.960ENSORLG00000004580srsf1a7990.452Oryzias_latipes
ENSHCOG00000018918srsf1a8886.607ENSORLG00020009456srsf1a8490.452Oryzias_latipes_hni
ENSHCOG00000018918srsf1a8886.607ENSORLG00015014384srsf1a8490.452Oryzias_latipes_hsok
ENSHCOG00000018918srsf1a7089.444ENSOMEG00000004106srsf1a7187.778Oryzias_melastigma
ENSHCOG00000018918srsf1a8188.462ENSOGAG00000025950-7887.310Otolemur_garnettii
ENSHCOG00000018918srsf1a7782.741ENSOARG00000008323SRSF17782.741Ovis_aries
ENSHCOG00000018918srsf1a9781.928ENSPPAG00000043403-9588.406Pan_paniscus
ENSHCOG00000018918srsf1a9781.928ENSPPRG00000004238-9088.108Panthera_pardus
ENSHCOG00000018918srsf1a9781.928ENSPTRG00000049077SRSF19588.406Pan_troglodytes
ENSHCOG00000018918srsf1a9781.928ENSPANG00000022305-9588.406Papio_anubis
ENSHCOG00000018918srsf1a9864.032ENSPANG00000030275-7564.500Papio_anubis
ENSHCOG00000018918srsf1a7787.817ENSPKIG00000012857srsf1b7884.772Paramormyrops_kingsleyae
ENSHCOG00000018918srsf1a8882.743ENSPKIG00000007204srsf1a8484.500Paramormyrops_kingsleyae
ENSHCOG00000018918srsf1a7780.905ENSPSIG00000009000-7879.695Pelodiscus_sinensis
ENSHCOG00000018918srsf1a9478.512ENSPMGG00000013112-8093.048Periophthalmus_magnuspinnatus
ENSHCOG00000018918srsf1a7982.673ENSPMGG00000005467-7982.412Periophthalmus_magnuspinnatus
ENSHCOG00000018918srsf1a9781.928ENSPEMG00000021416Srsf17887.310Peromyscus_maniculatus_bairdii
ENSHCOG00000018918srsf1a7787.817ENSPCIG00000006076-7887.817Phascolarctos_cinereus
ENSHCOG00000018918srsf1a7984.236ENSPFOG00000018325-7082.412Poecilia_formosa
ENSHCOG00000018918srsf1a7984.236ENSPLAG00000008416srsf1b8082.412Poecilia_latipinna
ENSHCOG00000018918srsf1a5089.147ENSPMEG00000020607-9986.047Poecilia_mexicana
ENSHCOG00000018918srsf1a7984.236ENSPMEG00000002388-8082.412Poecilia_mexicana
ENSHCOG00000018918srsf1a5089.147ENSPMEG00000014312-9986.047Poecilia_mexicana
ENSHCOG00000018918srsf1a7891.960ENSPREG00000009667srsf1a7990.452Poecilia_reticulata
ENSHCOG00000018918srsf1a9781.928ENSPPYG00000008240SRSF17887.310Pongo_abelii
ENSHCOG00000018918srsf1a7787.817ENSPCAG00000005199SRSF17887.310Procavia_capensis
ENSHCOG00000018918srsf1a9781.928ENSPCOG00000023654-9588.406Propithecus_coquereli
ENSHCOG00000018918srsf1a8469.907ENSPCOG00000025736-9371.066Propithecus_coquereli
ENSHCOG00000018918srsf1a5194.286ENSPVAG00000000519-5394.286Pteropus_vampyrus
ENSHCOG00000018918srsf1a7785.787ENSPNAG00000014601srsf1b7884.264Pygocentrus_nattereri
ENSHCOG00000018918srsf1a7885.000ENSPNAG00000022241srsf1a7982.500Pygocentrus_nattereri
ENSHCOG00000018918srsf1a7787.817ENSRNOG00000050323Srsf17887.310Rattus_norvegicus
ENSHCOG00000018918srsf1a9781.928ENSRBIG00000034445-9588.406Rhinopithecus_bieti
ENSHCOG00000018918srsf1a9781.928ENSRROG00000041506-9588.406Rhinopithecus_roxellana
ENSHCOG00000018918srsf1a9781.928ENSSBOG00000025377-9588.406Saimiri_boliviensis_boliviensis
ENSHCOG00000018918srsf1a7787.817ENSSHAG00000002552-7887.817Sarcophilus_harrisii
ENSHCOG00000018918srsf1a7787.817ENSSFOG00015004800srsf1a7784.772Scleropages_formosus
ENSHCOG00000018918srsf1a7785.000ENSSMAG00000009719-7885.500Scophthalmus_maximus
ENSHCOG00000018918srsf1a7890.452ENSSMAG00000007018-7987.940Scophthalmus_maximus
ENSHCOG00000018918srsf1a9871.713ENSSDUG00000003929-8377.387Seriola_dumerili
ENSHCOG00000018918srsf1a8885.714ENSSDUG00000011303-8489.447Seriola_dumerili
ENSHCOG00000018918srsf1a7890.955ENSSLDG00000010543-7989.447Seriola_lalandi_dorsalis
ENSHCOG00000018918srsf1a8970.175ENSSLDG00000016895-7978.238Seriola_lalandi_dorsalis
ENSHCOG00000018918srsf1a7777.778ENSSLDG00000016868-7677.778Seriola_lalandi_dorsalis
ENSHCOG00000018918srsf1a7285.870ENSSARG00000010949-6288.587Sorex_araneus
ENSHCOG00000018918srsf1a9781.526ENSSPUG00000000804-9187.568Sphenodon_punctatus
ENSHCOG00000018918srsf1a7892.965ENSSPAG00000022562-7991.457Stegastes_partitus
ENSHCOG00000018918srsf1a7784.466ENSSPAG00000014152-8083.495Stegastes_partitus
ENSHCOG00000018918srsf1a9781.928ENSSSCG00000017626-7887.310Sus_scrofa
ENSHCOG00000018918srsf1a5485.401ENSTGUG00000008416-7284.672Taeniopygia_guttata
ENSHCOG00000018918srsf1a7890.955ENSTRUG00000003691srsf1a7989.447Takifugu_rubripes
ENSHCOG00000018918srsf1a7890.955ENSTNIG00000016223srsf1a7989.000Tetraodon_nigroviridis
ENSHCOG00000018918srsf1a7286.957ENSTBEG00000015378-6286.413Tupaia_belangeri
ENSHCOG00000018918srsf1a5386.029ENSTTRG00000007310SRSF17285.294Tursiops_truncatus
ENSHCOG00000018918srsf1a7787.817ENSUAMG00000009858SRSF17887.310Ursus_americanus
ENSHCOG00000018918srsf1a9781.928ENSUMAG00000000455-7687.310Ursus_maritimus
ENSHCOG00000018918srsf1a7788.325ENSVPAG00000010094SRSF17886.802Vicugna_pacos
ENSHCOG00000018918srsf1a9781.928ENSVVUG00000011882-7687.310Vulpes_vulpes
ENSHCOG00000018918srsf1a7785.279ENSXETG00000008954srsf17983.491Xenopus_tropicalis
ENSHCOG00000018918srsf1a7891.960ENSXMAG00000011766srsf1a7990.452Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us