EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000019011 (Gene tree)
Gene ID: 109519581
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5465 bases
Position: chrKV879663.1:32099-37563
Accession: 109519581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015417	RRM_1	PF00076.22	8.7e-11	1	1
ENSHCOP00000015417	RRM_3	PF08777.11	1.5e-26	1	1
ENSHCOP00000015417	La	PF05383.17	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023440	-	2154	XM_019876251	ENSHCOP00000015417	395 (aa)	XP_019731810	UPI00094E6D72

Gene Model

Click here to download ENSHCOG00000019011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019011's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019011	ssb	99	55.000	ENSG00000138385	SSB	98	61.864	Homo_sapiens
ENSHCOG00000019011	ssb	99	77.020	ENSAPOG00000003448	ssb	99	77.020	Acanthochromis_polyacanthus
ENSHCOG00000019011	ssb	99	52.427	ENSAMEG00000010507	SSB	98	52.427	Ailuropoda_melanoleuca
ENSHCOG00000019011	ssb	92	77.534	ENSACIG00000001738	ssb	94	77.008	Amphilophus_citrinellus
ENSHCOG00000019011	ssb	99	76.515	ENSAOCG00000020398	ssb	99	76.826	Amphiprion_ocellaris
ENSHCOG00000019011	ssb	99	76.515	ENSAPEG00000020395	ssb	99	76.826	Amphiprion_percula
ENSHCOG00000019011	ssb	99	80.303	ENSATEG00000016884	ssb	99	80.051	Anabas_testudineus
ENSHCOG00000019011	ssb	99	52.404	ENSAPLG00000006109	SSB	98	52.048	Anas_platyrhynchos
ENSHCOG00000019011	ssb	99	53.616	ENSACAG00000017008	SSB	97	52.369	Anolis_carolinensis
ENSHCOG00000019011	ssb	99	50.505	ENSANAG00000027195	-	97	49.495	Aotus_nancymaae
ENSHCOG00000019011	ssb	99	75.127	ENSACLG00000010798	ssb	99	74.121	Astatotilapia_calliptera
ENSHCOG00000019011	ssb	99	57.531	ENSAMXG00000012606	ssb	99	57.037	Astyanax_mexicanus
ENSHCOG00000019011	ssb	99	55.808	ENSBTAG00000008716	SSB	98	55.556	Bos_taurus
ENSHCOG00000019011	ssb	75	35.161	WBGene00016653	C44E4.4	68	38.686	Caenorhabditis_elegans
ENSHCOG00000019011	ssb	99	56.423	ENSCJAG00000045073	SSB	98	56.171	Callithrix_jacchus
ENSHCOG00000019011	ssb	99	54.523	ENSCAFG00000012418	SSB	98	54.271	Canis_familiaris
ENSHCOG00000019011	ssb	99	54.523	ENSCAFG00020002900	SSB	98	54.271	Canis_lupus_dingo
ENSHCOG00000019011	ssb	99	55.416	ENSCHIG00000022624	-	98	55.164	Capra_hircus
ENSHCOG00000019011	ssb	99	51.385	ENSCHIG00000022196	-	97	50.370	Capra_hircus
ENSHCOG00000019011	ssb	99	56.061	ENSTSYG00000000097	SSB	97	55.808	Carlito_syrichta
ENSHCOG00000019011	ssb	99	56.171	ENSCPOG00000003338	SSB	98	55.919	Cavia_porcellus
ENSHCOG00000019011	ssb	99	56.423	ENSCCAG00000035147	SSB	98	56.171	Cebus_capucinus
ENSHCOG00000019011	ssb	99	42.065	ENSCATG00000042909	-	97	41.814	Cercocebus_atys
ENSHCOG00000019011	ssb	72	52.595	ENSCATG00000036701	SSB	83	52.249	Cercocebus_atys
ENSHCOG00000019011	ssb	99	55.668	ENSCLAG00000015617	-	98	55.416	Chinchilla_lanigera
ENSHCOG00000019011	ssb	97	50.515	ENSCSAG00000018390	-	91	51.791	Chlorocebus_sabaeus
ENSHCOG00000019011	ssb	99	56.171	ENSCSAG00000015200	SSB	87	55.919	Chlorocebus_sabaeus
ENSHCOG00000019011	ssb	99	56.423	ENSCHOG00000007763	SSB	98	56.171	Choloepus_hoffmanni
ENSHCOG00000019011	ssb	99	57.357	ENSCPBG00000006519	SSB	98	57.357	Chrysemys_picta_bellii
ENSHCOG00000019011	ssb	99	56.171	ENSCANG00000027695	SSB	98	55.919	Colobus_angolensis_palliatus
ENSHCOG00000019011	ssb	96	43.717	ENSCANG00000028838	-	90	43.455	Colobus_angolensis_palliatus
ENSHCOG00000019011	ssb	99	47.727	ENSCANG00000033240	-	97	46.970	Colobus_angolensis_palliatus
ENSHCOG00000019011	ssb	99	50.750	ENSCGRG00001024831	Ssb	98	50.750	Cricetulus_griseus_chok1gshd
ENSHCOG00000019011	ssb	99	50.750	ENSCGRG00000005387	Ssb	98	50.750	Cricetulus_griseus_crigri
ENSHCOG00000019011	ssb	99	76.515	ENSCSEG00000011599	ssb	99	76.574	Cynoglossus_semilaevis
ENSHCOG00000019011	ssb	99	75.063	ENSCVAG00000021558	ssb	99	75.315	Cyprinodon_variegatus
ENSHCOG00000019011	ssb	99	59.398	ENSDARG00000029252	ssb	99	59.148	Danio_rerio
ENSHCOG00000019011	ssb	99	55.919	ENSDNOG00000013450	SSB	98	55.668	Dasypus_novemcinctus
ENSHCOG00000019011	ssb	99	51.870	ENSDORG00000005543	Ssb	97	52.120	Dipodomys_ordii
ENSHCOG00000019011	ssb	85	34.682	FBgn0011638	La	72	35.354	Drosophila_melanogaster
ENSHCOG00000019011	ssb	51	59.406	ENSETEG00000004614	-	52	59.406	Echinops_telfairi
ENSHCOG00000019011	ssb	98	43.702	ENSEBUG00000001237	ssb	92	45.125	Eptatretus_burgeri
ENSHCOG00000019011	ssb	99	55.668	ENSEASG00005022835	SSB	98	55.416	Equus_asinus_asinus
ENSHCOG00000019011	ssb	99	55.668	ENSECAG00000018495	SSB	98	55.416	Equus_caballus
ENSHCOG00000019011	ssb	76	47.176	ENSEEUG00000008077	SSB	75	47.651	Erinaceus_europaeus
ENSHCOG00000019011	ssb	99	63.910	ENSELUG00000020929	ssb	99	64.160	Esox_lucius
ENSHCOG00000019011	ssb	99	55.276	ENSFCAG00000011601	SSB	98	55.025	Felis_catus
ENSHCOG00000019011	ssb	99	56.171	ENSFALG00000000930	SSB	97	55.164	Ficedula_albicollis
ENSHCOG00000019011	ssb	99	55.919	ENSFDAG00000000598	SSB	98	55.668	Fukomys_damarensis
ENSHCOG00000019011	ssb	74	72.757	ENSFHEG00000003268	ssb	93	72.607	Fundulus_heteroclitus
ENSHCOG00000019011	ssb	99	68.734	ENSGMOG00000002664	ssb	100	68.828	Gadus_morhua
ENSHCOG00000019011	ssb	99	56.030	ENSGALG00000009677	SSB	97	53.865	Gallus_gallus
ENSHCOG00000019011	ssb	99	74.811	ENSGAFG00000002749	ssb	99	75.063	Gambusia_affinis
ENSHCOG00000019011	ssb	99	71.393	ENSGACG00000005107	ssb	99	71.891	Gasterosteus_aculeatus
ENSHCOG00000019011	ssb	99	57.107	ENSGAGG00000007807	SSB	98	57.606	Gopherus_agassizii
ENSHCOG00000019011	ssb	99	46.599	ENSGGOG00000024891	-	97	46.348	Gorilla_gorilla
ENSHCOG00000019011	ssb	54	52.055	ENSGGOG00000023471	-	89	52.511	Gorilla_gorilla
ENSHCOG00000019011	ssb	99	74.619	ENSHBUG00000006584	ssb	99	73.618	Haplochromis_burtoni
ENSHCOG00000019011	ssb	99	54.703	ENSHGLG00000017580	-	98	54.208	Heterocephalus_glaber_female
ENSHCOG00000019011	ssb	100	50.000	ENSHGLG00000004478	-	99	48.916	Heterocephalus_glaber_female
ENSHCOG00000019011	ssb	99	49.114	ENSHGLG00000005832	-	97	48.861	Heterocephalus_glaber_female
ENSHCOG00000019011	ssb	99	50.380	ENSHGLG00100008767	-	97	48.731	Heterocephalus_glaber_male
ENSHCOG00000019011	ssb	99	54.703	ENSHGLG00100003084	-	98	54.208	Heterocephalus_glaber_male
ENSHCOG00000019011	ssb	99	58.313	ENSIPUG00000003681	SSB	99	58.561	Ictalurus_punctatus
ENSHCOG00000019011	ssb	99	55.668	ENSSTOG00000008416	SSB	98	54.798	Ictidomys_tridecemlineatus
ENSHCOG00000019011	ssb	90	42.897	ENSJJAG00000016250	-	94	41.504	Jaculus_jaculus
ENSHCOG00000019011	ssb	99	48.792	ENSJJAG00000023158	-	98	48.309	Jaculus_jaculus
ENSHCOG00000019011	ssb	99	76.768	ENSKMAG00000017317	ssb	99	76.263	Kryptolebias_marmoratus
ENSHCOG00000019011	ssb	99	76.709	ENSLBEG00000017345	ssb	99	76.456	Labrus_bergylta
ENSHCOG00000019011	ssb	100	53.333	ENSLACG00000014056	SSB	98	53.580	Latimeria_chalumnae
ENSHCOG00000019011	ssb	99	63.591	ENSLOCG00000007933	ssb	98	63.092	Lepisosteus_oculatus
ENSHCOG00000019011	ssb	99	48.354	ENSLAFG00000028909	-	97	48.101	Loxodonta_africana
ENSHCOG00000019011	ssb	75	42.953	ENSLAFG00000026721	-	97	42.761	Loxodonta_africana
ENSHCOG00000019011	ssb	99	52.415	ENSLAFG00000000867	-	98	52.415	Loxodonta_africana
ENSHCOG00000019011	ssb	99	56.171	ENSMFAG00000039066	SSB	98	55.919	Macaca_fascicularis
ENSHCOG00000019011	ssb	89	48.011	ENSMFAG00000041478	-	88	50.625	Macaca_fascicularis
ENSHCOG00000019011	ssb	99	47.475	ENSMMUG00000011724	-	76	51.562	Macaca_mulatta
ENSHCOG00000019011	ssb	99	56.171	ENSMMUG00000023051	SSB	98	55.919	Macaca_mulatta
ENSHCOG00000019011	ssb	99	41.562	ENSMMUG00000039889	-	98	41.562	Macaca_mulatta
ENSHCOG00000019011	ssb	99	47.631	ENSMNEG00000028321	SSB	97	48.379	Macaca_nemestrina
ENSHCOG00000019011	ssb	89	48.011	ENSMNEG00000034698	-	88	50.625	Macaca_nemestrina
ENSHCOG00000019011	ssb	99	56.171	ENSMLEG00000035717	SSB	98	55.919	Mandrillus_leucophaeus
ENSHCOG00000019011	ssb	99	38.791	ENSMLEG00000042644	-	97	37.879	Mandrillus_leucophaeus
ENSHCOG00000019011	ssb	99	77.525	ENSMAMG00000004800	ssb	99	76.768	Mastacembelus_armatus
ENSHCOG00000019011	ssb	99	75.127	ENSMZEG00005005749	ssb	99	74.121	Maylandia_zebra
ENSHCOG00000019011	ssb	99	56.281	ENSMGAG00000010328	SSB	97	61.000	Meleagris_gallopavo
ENSHCOG00000019011	ssb	99	56.423	ENSMICG00000028252	-	97	56.171	Microcebus_murinus
ENSHCOG00000019011	ssb	97	49.871	ENSMICG00000033304	-	92	52.617	Microcebus_murinus
ENSHCOG00000019011	ssb	99	54.321	ENSMODG00000008227	-	98	54.321	Monodelphis_domestica
ENSHCOG00000019011	ssb	99	47.727	ENSMODG00000019271	-	97	47.475	Monodelphis_domestica
ENSHCOG00000019011	ssb	99	37.028	ENSMODG00000007027	-	97	45.844	Monodelphis_domestica
ENSHCOG00000019011	ssb	90	72.099	ENSMALG00000008045	ssb	88	75.758	Monopterus_albus
ENSHCOG00000019011	ssb	99	50.122	MGP_CAROLIEiJ_G0023629	-	94	61.333	Mus_caroli
ENSHCOG00000019011	ssb	99	50.122	ENSMUSG00000068882	Ssb	94	61.333	Mus_musculus
ENSHCOG00000019011	ssb	99	49.878	MGP_PahariEiJ_G0025081	-	96	58.757	Mus_pahari
ENSHCOG00000019011	ssb	99	50.122	MGP_SPRETEiJ_G0024551	Ssb	94	61.333	Mus_spretus
ENSHCOG00000019011	ssb	99	55.164	ENSMPUG00000000785	SSB	98	54.912	Mustela_putorius_furo
ENSHCOG00000019011	ssb	99	53.415	ENSMLUG00000016316	SSB	98	53.398	Myotis_lucifugus
ENSHCOG00000019011	ssb	99	74.112	ENSNBRG00000012661	ssb	99	73.367	Neolamprologus_brichardi
ENSHCOG00000019011	ssb	90	42.978	ENSNLEG00000028754	-	76	45.820	Nomascus_leucogenys
ENSHCOG00000019011	ssb	99	55.919	ENSNLEG00000004958	SSB	98	55.668	Nomascus_leucogenys
ENSHCOG00000019011	ssb	63	58.800	ENSMEUG00000001650	-	100	58.800	Notamacropus_eugenii
ENSHCOG00000019011	ssb	94	53.209	ENSODEG00000004202	-	99	52.533	Octodon_degus
ENSHCOG00000019011	ssb	99	75.127	ENSONIG00000008776	ssb	99	74.372	Oreochromis_niloticus
ENSHCOG00000019011	ssb	98	55.867	ENSOANG00000008543	SSB	96	55.867	Ornithorhynchus_anatinus
ENSHCOG00000019011	ssb	99	55.164	ENSOCUG00000010396	SSB	98	54.912	Oryctolagus_cuniculus
ENSHCOG00000019011	ssb	99	74.747	ENSORLG00000017208	ssb	99	73.737	Oryzias_latipes
ENSHCOG00000019011	ssb	99	74.747	ENSORLG00020022574	ssb	99	73.990	Oryzias_latipes_hni
ENSHCOG00000019011	ssb	99	75.253	ENSORLG00015016592	ssb	99	74.242	Oryzias_latipes_hsok
ENSHCOG00000019011	ssb	99	77.975	ENSOMEG00000003193	ssb	99	77.975	Oryzias_melastigma
ENSHCOG00000019011	ssb	99	51.932	ENSOGAG00000029768	SSB	98	51.932	Otolemur_garnettii
ENSHCOG00000019011	ssb	99	55.416	ENSOARG00000002906	SSB	98	55.164	Ovis_aries
ENSHCOG00000019011	ssb	98	45.013	ENSPPAG00000006189	-	96	43.990	Pan_paniscus
ENSHCOG00000019011	ssb	99	55.000	ENSPPAG00000042673	SSB	98	55.250	Pan_paniscus
ENSHCOG00000019011	ssb	99	47.103	ENSPPAG00000032427	-	94	55.738	Pan_paniscus
ENSHCOG00000019011	ssb	99	55.276	ENSPPRG00000006599	SSB	98	55.025	Panthera_pardus
ENSHCOG00000019011	ssb	99	55.276	ENSPTIG00000011021	SSB	95	55.025	Panthera_tigris_altaica
ENSHCOG00000019011	ssb	99	55.000	ENSPTRG00000012620	SSB	98	55.250	Pan_troglodytes
ENSHCOG00000019011	ssb	99	45.592	ENSPTRG00000042880	-	97	45.340	Pan_troglodytes
ENSHCOG00000019011	ssb	99	56.171	ENSPANG00000007440	SSB	98	55.919	Papio_anubis
ENSHCOG00000019011	ssb	99	41.058	ENSPANG00000034126	-	97	40.657	Papio_anubis
ENSHCOG00000019011	ssb	96	38.058	ENSPANG00000031877	-	84	37.569	Papio_anubis
ENSHCOG00000019011	ssb	99	64.322	ENSPKIG00000019325	ssb	99	64.160	Paramormyrops_kingsleyae
ENSHCOG00000019011	ssb	99	58.354	ENSPSIG00000002265	SSB	91	56.858	Pelodiscus_sinensis
ENSHCOG00000019011	ssb	88	67.714	ENSPMGG00000020075	ssb	91	68.481	Periophthalmus_magnuspinnatus
ENSHCOG00000019011	ssb	82	45.846	ENSPMAG00000002982	ssb	86	45.405	Petromyzon_marinus
ENSHCOG00000019011	ssb	95	55.703	ENSPCIG00000028591	-	98	55.528	Phascolarctos_cinereus
ENSHCOG00000019011	ssb	99	75.696	ENSPFOG00000009650	ssb	99	75.443	Poecilia_formosa
ENSHCOG00000019011	ssb	99	75.443	ENSPLAG00000020498	ssb	99	75.443	Poecilia_latipinna
ENSHCOG00000019011	ssb	99	75.949	ENSPMEG00000001051	ssb	99	75.696	Poecilia_mexicana
ENSHCOG00000019011	ssb	92	75.410	ENSPREG00000003708	ssb	95	75.758	Poecilia_reticulata
ENSHCOG00000019011	ssb	99	55.919	ENSPPYG00000012919	SSB	98	55.668	Pongo_abelii
ENSHCOG00000019011	ssb	96	53.927	ENSPCAG00000010276	SSB	99	53.927	Procavia_capensis
ENSHCOG00000019011	ssb	99	52.393	ENSPCOG00000015741	-	98	53.652	Propithecus_coquereli
ENSHCOG00000019011	ssb	99	50.126	ENSPCOG00000023189	-	97	49.874	Propithecus_coquereli
ENSHCOG00000019011	ssb	89	56.056	ENSPVAG00000006615	SSB	98	55.620	Pteropus_vampyrus
ENSHCOG00000019011	ssb	99	74.619	ENSPNYG00000006444	ssb	99	73.618	Pundamilia_nyererei
ENSHCOG00000019011	ssb	99	56.824	ENSPNAG00000011708	ssb	99	56.824	Pygocentrus_nattereri
ENSHCOG00000019011	ssb	99	50.251	ENSRNOG00000011606	AABR07061825.1	98	50.251	Rattus_norvegicus
ENSHCOG00000019011	ssb	99	49.635	ENSRNOG00000007998	Ssb	98	49.148	Rattus_norvegicus
ENSHCOG00000019011	ssb	99	49.127	ENSRBIG00000041972	SSB	82	65.741	Rhinopithecus_bieti
ENSHCOG00000019011	ssb	95	46.950	ENSRBIG00000041232	-	98	46.154	Rhinopithecus_bieti
ENSHCOG00000019011	ssb	87	52.161	ENSRBIG00000041608	-	94	50.144	Rhinopithecus_bieti
ENSHCOG00000019011	ssb	99	40.704	ENSRBIG00000029918	-	97	40.452	Rhinopithecus_bieti
ENSHCOG00000019011	ssb	99	47.462	ENSRROG00000031684	-	99	47.342	Rhinopithecus_roxellana
ENSHCOG00000019011	ssb	99	56.171	ENSRROG00000040346	SSB	98	55.919	Rhinopithecus_roxellana
ENSHCOG00000019011	ssb	87	54.598	ENSRROG00000034102	-	95	50.515	Rhinopithecus_roxellana
ENSHCOG00000019011	ssb	99	45.729	ENSRROG00000007149	-	97	45.477	Rhinopithecus_roxellana
ENSHCOG00000019011	ssb	99	56.171	ENSSBOG00000027204	SSB	98	55.919	Saimiri_boliviensis_boliviensis
ENSHCOG00000019011	ssb	99	55.779	ENSSHAG00000018062	SSB	98	56.030	Sarcophilus_harrisii
ENSHCOG00000019011	ssb	99	63.728	ENSSFOG00015000550	ssb	98	64.160	Scleropages_formosus
ENSHCOG00000019011	ssb	99	73.791	ENSSMAG00000013885	ssb	98	75.890	Scophthalmus_maximus
ENSHCOG00000019011	ssb	99	79.545	ENSSDUG00000020117	ssb	99	79.849	Seriola_dumerili
ENSHCOG00000019011	ssb	99	76.396	ENSSLDG00000002525	ssb	99	76.396	Seriola_lalandi_dorsalis
ENSHCOG00000019011	ssb	96	50.262	ENSSARG00000007747	SSB	99	49.344	Sorex_araneus
ENSHCOG00000019011	ssb	99	56.784	ENSSPUG00000012112	SSB	98	55.779	Sphenodon_punctatus
ENSHCOG00000019011	ssb	99	76.263	ENSSPAG00000005696	ssb	99	76.263	Stegastes_partitus
ENSHCOG00000019011	ssb	97	50.386	ENSSSCG00000015938	SSB	89	51.801	Sus_scrofa
ENSHCOG00000019011	ssb	95	55.556	ENSTGUG00000007942	SSB	97	54.135	Taeniopygia_guttata
ENSHCOG00000019011	ssb	99	76.396	ENSTRUG00000017839	ssb	99	76.142	Takifugu_rubripes
ENSHCOG00000019011	ssb	91	74.238	ENSTNIG00000000915	ssb	99	72.253	Tetraodon_nigroviridis
ENSHCOG00000019011	ssb	81	65.741	ENSTBEG00000009056	SSB	80	65.741	Tupaia_belangeri
ENSHCOG00000019011	ssb	99	56.030	ENSTTRG00000002152	SSB	98	55.779	Tursiops_truncatus
ENSHCOG00000019011	ssb	93	55.405	ENSUAMG00000027833	SSB	95	55.647	Ursus_americanus
ENSHCOG00000019011	ssb	99	54.523	ENSUMAG00000013907	SSB	98	54.271	Ursus_maritimus
ENSHCOG00000019011	ssb	99	55.443	ENSVPAG00000007183	SSB	98	55.190	Vicugna_pacos
ENSHCOG00000019011	ssb	99	54.523	ENSVVUG00000016573	SSB	76	54.271	Vulpes_vulpes
ENSHCOG00000019011	ssb	98	50.483	ENSXETG00000025402	ssb	97	49.034	Xenopus_tropicalis
ENSHCOG00000019011	ssb	92	72.404	ENSXCOG00000019109	ssb	95	72.727	Xiphophorus_couchianus
ENSHCOG00000019011	ssb	99	74.055	ENSXMAG00000004888	ssb	99	74.055	Xiphophorus_maculatus