EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000019040 (Gene tree)
Gene ID: 109528572
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 30432 bases
Position: chrKV880338.1:6147271-6177702
Accession: 109528572
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000027312	RRM_1	PF00076.22	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023334	-	693	XM_019891362	ENSHCOP00000027312	230 (aa)	XP_019746921	-

Gene Model

Click here to download ENSHCOG00000019040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000019040	rbm38	79	56.061	ENSHCOG00000005622	-	57	56.061
ENSHCOG00000019040	rbm38	57	68.657	ENSHCOG00000000137	rbm24b	54	70.229

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019040	rbm38	70	64.072	ENSG00000132819	RBM38	90	77.477	Homo_sapiens
ENSHCOG00000019040	rbm38	78	55.612	ENSAPOG00000009939	-	89	56.122	Acanthochromis_polyacanthus
ENSHCOG00000019040	rbm38	100	64.542	ENSAPOG00000003301	rbm38	100	64.542	Acanthochromis_polyacanthus
ENSHCOG00000019040	rbm38	100	64.257	ENSACIG00000000010	rbm38	100	64.257	Amphilophus_citrinellus
ENSHCOG00000019040	rbm38	78	56.633	ENSACIG00000012502	-	98	73.043	Amphilophus_citrinellus
ENSHCOG00000019040	rbm38	79	55.556	ENSAOCG00000012559	RBM38	93	51.709	Amphiprion_ocellaris
ENSHCOG00000019040	rbm38	100	64.542	ENSAOCG00000013497	-	100	64.542	Amphiprion_ocellaris
ENSHCOG00000019040	rbm38	100	64.542	ENSAPEG00000013137	rbm38	100	64.542	Amphiprion_percula
ENSHCOG00000019040	rbm38	78	55.612	ENSAPEG00000023581	-	91	51.709	Amphiprion_percula
ENSHCOG00000019040	rbm38	78	55.102	ENSATEG00000016710	-	91	51.282	Anabas_testudineus
ENSHCOG00000019040	rbm38	100	59.761	ENSATEG00000016366	rbm38	100	59.761	Anabas_testudineus
ENSHCOG00000019040	rbm38	55	71.318	ENSACAG00000016238	RBM38	54	71.318	Anolis_carolinensis
ENSHCOG00000019040	rbm38	82	57.653	ENSANAG00000031959	RBM38	74	85.556	Aotus_nancymaae
ENSHCOG00000019040	rbm38	78	56.122	ENSACLG00000019514	-	80	56.122	Astatotilapia_calliptera
ENSHCOG00000019040	rbm38	74	57.297	ENSAMXG00000015601	-	79	57.297	Astyanax_mexicanus
ENSHCOG00000019040	rbm38	80	52.261	ENSAMXG00000038120	rbm38	84	52.261	Astyanax_mexicanus
ENSHCOG00000019040	rbm38	65	66.887	ENSBTAG00000008105	RBM38	63	66.887	Bos_taurus
ENSHCOG00000019040	rbm38	70	64.671	ENSCJAG00000019139	RBM38	74	85.556	Callithrix_jacchus
ENSHCOG00000019040	rbm38	70	62.874	ENSCAFG00020021943	RBM38	69	62.874	Canis_lupus_dingo
ENSHCOG00000019040	rbm38	65	66.887	ENSCHIG00000002609	RBM38	63	66.887	Capra_hircus
ENSHCOG00000019040	rbm38	70	64.072	ENSCPOG00000012781	RBM38	69	64.072	Cavia_porcellus
ENSHCOG00000019040	rbm38	70	64.671	ENSCCAG00000036872	RBM38	74	85.556	Cebus_capucinus
ENSHCOG00000019040	rbm38	70	64.072	ENSCATG00000032133	RBM38	74	85.556	Cercocebus_atys
ENSHCOG00000019040	rbm38	71	63.905	ENSCLAG00000005906	RBM38	73	63.905	Chinchilla_lanigera
ENSHCOG00000019040	rbm38	70	64.072	ENSCSAG00000015503	RBM38	70	64.072	Chlorocebus_sabaeus
ENSHCOG00000019040	rbm38	81	54.592	ENSCPBG00000024059	RBM38	91	54.592	Chrysemys_picta_bellii
ENSHCOG00000019040	rbm38	75	45.699	ENSCANG00000030105	-	70	45.699	Colobus_angolensis_palliatus
ENSHCOG00000019040	rbm38	65	68.874	ENSCGRG00001012928	Rbm38	63	68.874	Cricetulus_griseus_chok1gshd
ENSHCOG00000019040	rbm38	74	62.051	ENSCSEG00000020943	rbm38	73	59.193	Cynoglossus_semilaevis
ENSHCOG00000019040	rbm38	78	54.082	ENSCSEG00000004701	-	97	48.583	Cynoglossus_semilaevis
ENSHCOG00000019040	rbm38	78	56.122	ENSCVAG00000005472	-	92	50.420	Cyprinodon_variegatus
ENSHCOG00000019040	rbm38	100	60.558	ENSCVAG00000015952	rbm38	100	60.558	Cyprinodon_variegatus
ENSHCOG00000019040	rbm38	97	52.941	ENSDARG00000058818	rbm38	98	52.941	Danio_rerio
ENSHCOG00000019040	rbm38	65	67.550	ENSDNOG00000032004	RBM38	72	67.550	Dasypus_novemcinctus
ENSHCOG00000019040	rbm38	70	63.473	ENSECAG00000007700	RBM38	69	63.473	Equus_caballus
ENSHCOG00000019040	rbm38	65	64.901	ENSEEUG00000013489	RBM38	63	64.901	Erinaceus_europaeus
ENSHCOG00000019040	rbm38	87	59.276	ENSELUG00000000585	-	97	59.276	Esox_lucius
ENSHCOG00000019040	rbm38	90	51.316	ENSELUG00000005849	-	90	51.316	Esox_lucius
ENSHCOG00000019040	rbm38	65	66.225	ENSFCAG00000042916	RBM38	74	84.444	Felis_catus
ENSHCOG00000019040	rbm38	65	65.385	ENSFALG00000010805	RBM38	82	65.385	Ficedula_albicollis
ENSHCOG00000019040	rbm38	92	52.838	ENSFHEG00000006160	-	96	52.838	Fundulus_heteroclitus
ENSHCOG00000019040	rbm38	100	61.508	ENSFHEG00000017748	rbm38	100	61.508	Fundulus_heteroclitus
ENSHCOG00000019040	rbm38	70	58.889	ENSGMOG00000016655	-	97	58.889	Gadus_morhua
ENSHCOG00000019040	rbm38	55	71.318	ENSGALG00000026081	RBM38	60	71.318	Gallus_gallus
ENSHCOG00000019040	rbm38	69	67.241	ENSGACG00000015224	rbm38	84	67.241	Gasterosteus_aculeatus
ENSHCOG00000019040	rbm38	72	55.191	ENSGACG00000009873	-	86	55.080	Gasterosteus_aculeatus
ENSHCOG00000019040	rbm38	55	72.868	ENSGAGG00000001187	RBM38	60	72.868	Gopherus_agassizii
ENSHCOG00000019040	rbm38	100	62.151	ENSHBUG00000012058	rbm38	100	62.151	Haplochromis_burtoni
ENSHCOG00000019040	rbm38	90	52.444	ENSHBUG00000011778	-	96	52.444	Haplochromis_burtoni
ENSHCOG00000019040	rbm38	70	63.473	ENSHGLG00000015077	RBM38	77	60.109	Heterocephalus_glaber_female
ENSHCOG00000019040	rbm38	83	55.072	ENSIPUG00000019349	-	87	55.072	Ictalurus_punctatus
ENSHCOG00000019040	rbm38	90	55.556	ENSKMAG00000012402	rbm38	99	55.556	Kryptolebias_marmoratus
ENSHCOG00000019040	rbm38	100	62.151	ENSLBEG00000018878	rbm38	100	62.151	Labrus_bergylta
ENSHCOG00000019040	rbm38	78	54.082	ENSLBEG00000016163	RBM38	90	50.893	Labrus_bergylta
ENSHCOG00000019040	rbm38	96	51.282	ENSLOCG00000003456	rbm38	98	51.282	Lepisosteus_oculatus
ENSHCOG00000019040	rbm38	70	64.072	ENSMFAG00000043808	RBM38	74	85.556	Macaca_fascicularis
ENSHCOG00000019040	rbm38	70	64.072	ENSMMUG00000031391	RBM38	74	85.556	Macaca_mulatta
ENSHCOG00000019040	rbm38	70	64.072	ENSMNEG00000034683	RBM38	74	85.556	Macaca_nemestrina
ENSHCOG00000019040	rbm38	100	64.400	ENSMAMG00000024135	rbm38	100	64.400	Mastacembelus_armatus
ENSHCOG00000019040	rbm38	78	56.122	ENSMAMG00000020499	RBM38	87	52.915	Mastacembelus_armatus
ENSHCOG00000019040	rbm38	90	52.444	ENSMZEG00005000849	-	96	52.444	Maylandia_zebra
ENSHCOG00000019040	rbm38	100	62.151	ENSMZEG00005026036	rbm38	100	62.151	Maylandia_zebra
ENSHCOG00000019040	rbm38	65	68.212	ENSMAUG00000021211	Rbm38	63	68.212	Mesocricetus_auratus
ENSHCOG00000019040	rbm38	82	57.653	ENSMICG00000038011	RBM38	89	57.653	Microcebus_murinus
ENSHCOG00000019040	rbm38	65	68.212	ENSMOCG00000008715	Rbm38	63	68.212	Microtus_ochrogaster
ENSHCOG00000019040	rbm38	78	56.633	ENSMMOG00000020051	-	83	58.824	Mola_mola
ENSHCOG00000019040	rbm38	55	72.868	ENSMODG00000016458	RBM38	84	55.102	Monodelphis_domestica
ENSHCOG00000019040	rbm38	73	58.919	ENSMALG00000004680	RBM38	71	58.919	Monopterus_albus
ENSHCOG00000019040	rbm38	100	57.265	ENSMALG00000022327	rbm38	100	57.265	Monopterus_albus
ENSHCOG00000019040	rbm38	65	68.212	MGP_CAROLIEiJ_G0024745	Rbm38	56	79.545	Mus_caroli
ENSHCOG00000019040	rbm38	65	68.212	ENSMUSG00000027510	Rbm38	56	79.545	Mus_musculus
ENSHCOG00000019040	rbm38	65	68.212	MGP_PahariEiJ_G0026186	Rbm38	56	79.545	Mus_pahari
ENSHCOG00000019040	rbm38	65	68.212	MGP_SPRETEiJ_G0025665	Rbm38	56	79.545	Mus_spretus
ENSHCOG00000019040	rbm38	65	66.225	ENSMPUG00000006518	RBM38	74	66.225	Mustela_putorius_furo
ENSHCOG00000019040	rbm38	65	65.563	ENSMLUG00000011140	RBM38	69	65.563	Myotis_lucifugus
ENSHCOG00000019040	rbm38	78	56.122	ENSNBRG00000022545	-	80	56.122	Neolamprologus_brichardi
ENSHCOG00000019040	rbm38	100	61.753	ENSNBRG00000022685	rbm38	100	61.753	Neolamprologus_brichardi
ENSHCOG00000019040	rbm38	70	63.473	ENSODEG00000007980	RBM38	69	63.473	Octodon_degus
ENSHCOG00000019040	rbm38	78	56.122	ENSONIG00000020324	-	81	56.122	Oreochromis_niloticus
ENSHCOG00000019040	rbm38	97	61.633	ENSONIG00000017073	rbm38	99	61.633	Oreochromis_niloticus
ENSHCOG00000019040	rbm38	87	50.971	ENSOANG00000009259	RBM38	81	50.971	Ornithorhynchus_anatinus
ENSHCOG00000019040	rbm38	77	54.359	ENSORLG00000027180	-	91	50.661	Oryzias_latipes
ENSHCOG00000019040	rbm38	100	59.127	ENSORLG00000012154	rbm38	100	59.127	Oryzias_latipes
ENSHCOG00000019040	rbm38	77	55.385	ENSORLG00020020751	-	91	50.661	Oryzias_latipes_hni
ENSHCOG00000019040	rbm38	100	59.921	ENSORLG00020017871	rbm38	100	59.921	Oryzias_latipes_hni
ENSHCOG00000019040	rbm38	100	59.524	ENSORLG00015012606	rbm38	100	59.524	Oryzias_latipes_hsok
ENSHCOG00000019040	rbm38	78	54.082	ENSORLG00015017040	-	91	50.220	Oryzias_latipes_hsok
ENSHCOG00000019040	rbm38	100	59.127	ENSOMEG00000006805	rbm38	100	59.127	Oryzias_melastigma
ENSHCOG00000019040	rbm38	78	53.061	ENSOMEG00000023912	-	91	49.145	Oryzias_melastigma
ENSHCOG00000019040	rbm38	65	66.887	ENSOGAG00000029136	RBM38	63	66.887	Otolemur_garnettii
ENSHCOG00000019040	rbm38	65	66.225	ENSPPRG00000009507	RBM38	74	84.444	Panthera_pardus
ENSHCOG00000019040	rbm38	79	58.511	ENSPTRG00000013661	RBM38	88	77.358	Pan_troglodytes
ENSHCOG00000019040	rbm38	53	74.797	ENSPTRG00000045845	-	68	74.797	Pan_troglodytes
ENSHCOG00000019040	rbm38	69	54.375	ENSPANG00000033127	-	65	54.375	Papio_anubis
ENSHCOG00000019040	rbm38	70	64.072	ENSPANG00000020919	-	74	85.556	Papio_anubis
ENSHCOG00000019040	rbm38	77	58.462	ENSPKIG00000018122	-	98	74.783	Paramormyrops_kingsleyae
ENSHCOG00000019040	rbm38	73	59.358	ENSPKIG00000025417	rbm38	79	59.259	Paramormyrops_kingsleyae
ENSHCOG00000019040	rbm38	55	72.093	ENSPSIG00000011649	RBM38	55	72.093	Pelodiscus_sinensis
ENSHCOG00000019040	rbm38	66	65.161	ENSPMGG00000017094	-	89	53.182	Periophthalmus_magnuspinnatus
ENSHCOG00000019040	rbm38	100	56.574	ENSPMGG00000011343	rbm38	100	58.167	Periophthalmus_magnuspinnatus
ENSHCOG00000019040	rbm38	79	56.021	ENSPCIG00000013648	RBM38	82	56.021	Phascolarctos_cinereus
ENSHCOG00000019040	rbm38	100	61.176	ENSPFOG00000011658	rbm38	100	61.176	Poecilia_formosa
ENSHCOG00000019040	rbm38	83	58.031	ENSPLAG00000002500	-	92	51.046	Poecilia_latipinna
ENSHCOG00000019040	rbm38	100	60.784	ENSPLAG00000005218	rbm38	100	60.784	Poecilia_latipinna
ENSHCOG00000019040	rbm38	100	60.784	ENSPMEG00000015770	rbm38	100	60.784	Poecilia_mexicana
ENSHCOG00000019040	rbm38	100	61.176	ENSPREG00000007398	rbm38	100	61.176	Poecilia_reticulata
ENSHCOG00000019040	rbm38	82	57.653	ENSPCOG00000026201	RBM38	74	85.556	Propithecus_coquereli
ENSHCOG00000019040	rbm38	86	54.419	ENSPNYG00000019727	-	98	73.913	Pundamilia_nyererei
ENSHCOG00000019040	rbm38	100	61.355	ENSPNYG00000021373	rbm38	100	61.753	Pundamilia_nyererei
ENSHCOG00000019040	rbm38	92	52.838	ENSPNAG00000010596	rbm38	97	52.838	Pygocentrus_nattereri
ENSHCOG00000019040	rbm38	80	54.040	ENSPNAG00000015123	-	87	73.214	Pygocentrus_nattereri
ENSHCOG00000019040	rbm38	65	68.212	ENSRNOG00000006420	Rbm38	63	68.212	Rattus_norvegicus
ENSHCOG00000019040	rbm38	71	55.422	ENSRROG00000036388	-	68	58.462	Rhinopithecus_roxellana
ENSHCOG00000019040	rbm38	65	68.212	ENSSBOG00000031053	RBM38	84	85.556	Saimiri_boliviensis_boliviensis
ENSHCOG00000019040	rbm38	79	59.314	ENSSFOG00015004453	rbm38	87	58.049	Scleropages_formosus
ENSHCOG00000019040	rbm38	78	56.122	ENSSDUG00000021082	RBM38	89	51.477	Seriola_dumerili
ENSHCOG00000019040	rbm38	100	63.745	ENSSDUG00000022611	rbm38	100	63.745	Seriola_dumerili
ENSHCOG00000019040	rbm38	100	63.745	ENSSLDG00000010845	rbm38	100	63.745	Seriola_lalandi_dorsalis
ENSHCOG00000019040	rbm38	78	56.122	ENSSLDG00000011778	RBM38	89	51.477	Seriola_lalandi_dorsalis
ENSHCOG00000019040	rbm38	100	64.542	ENSSPAG00000011113	rbm38	100	64.542	Stegastes_partitus
ENSHCOG00000019040	rbm38	78	55.102	ENSSPAG00000020989	RBM38	100	50.211	Stegastes_partitus
ENSHCOG00000019040	rbm38	88	55.189	ENSSSCG00000007504	RBM38	87	55.189	Sus_scrofa
ENSHCOG00000019040	rbm38	80	54.726	ENSTRUG00000019869	-	89	51.965	Takifugu_rubripes
ENSHCOG00000019040	rbm38	100	60.159	ENSTRUG00000024954	rbm38	100	60.558	Takifugu_rubripes
ENSHCOG00000019040	rbm38	72	59.563	ENSTNIG00000007093	-	83	60.109	Tetraodon_nigroviridis
ENSHCOG00000019040	rbm38	70	62.874	ENSUAMG00000019780	RBM38	69	62.874	Ursus_americanus
ENSHCOG00000019040	rbm38	70	62.874	ENSVVUG00000017246	RBM38	69	62.874	Vulpes_vulpes
ENSHCOG00000019040	rbm38	57	72.932	ENSXETG00000011268	rbm38	60	72.932	Xenopus_tropicalis
ENSHCOG00000019040	rbm38	56	65.942	ENSXCOG00000017324	-	63	65.942	Xiphophorus_couchianus
ENSHCOG00000019040	rbm38	100	61.355	ENSXMAG00000023662	rbm38	100	61.355	Xiphophorus_maculatus