EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000019130 (Gene tree)
Gene ID: 109514692
Gene Symbol: exosc2
Alias: fa97b01|wu:fa97b01|zgc:110117
Full Name: exosome component 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3435 bases
Position: chrKV879883.1:316571-320005
Accession: 109514692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000027358	ECR1_N	PF14382.6	9.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023417	-	1335	XM_019867994	ENSHCOP00000027358	293 (aa)	XP_019723553	UPI00094F306F

Gene Model

Click here to download ENSHCOG00000019130's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019130	exosc2	100	75.427	ENSG00000130713	EXOSC2	100	75.427	Homo_sapiens
ENSHCOG00000019130	exosc2	90	93.585	ENSAPOG00000008861	exosc2	97	93.585	Acanthochromis_polyacanthus
ENSHCOG00000019130	exosc2	100	74.744	ENSAMEG00000016239	EXOSC2	100	74.744	Ailuropoda_melanoleuca
ENSHCOG00000019130	exosc2	100	94.198	ENSACIG00000019054	exosc2	100	94.198	Amphilophus_citrinellus
ENSHCOG00000019130	exosc2	100	93.857	ENSAOCG00000008577	exosc2	100	93.857	Amphiprion_ocellaris
ENSHCOG00000019130	exosc2	100	93.857	ENSAOCG00000004983	exosc2	100	93.857	Amphiprion_ocellaris
ENSHCOG00000019130	exosc2	100	93.857	ENSAPEG00000014088	exosc2	100	93.857	Amphiprion_percula
ENSHCOG00000019130	exosc2	100	93.857	ENSATEG00000018680	exosc2	100	93.857	Anabas_testudineus
ENSHCOG00000019130	exosc2	96	77.580	ENSAPLG00000012516	EXOSC2	97	77.580	Anas_platyrhynchos
ENSHCOG00000019130	exosc2	99	75.427	ENSACAG00000002706	EXOSC2	99	75.427	Anolis_carolinensis
ENSHCOG00000019130	exosc2	100	93.515	ENSACLG00000013613	exosc2	100	93.515	Astatotilapia_calliptera
ENSHCOG00000019130	exosc2	100	86.102	ENSAMXG00000042605	exosc2	100	86.102	Astyanax_mexicanus
ENSHCOG00000019130	exosc2	100	75.427	ENSBTAG00000048071	EXOSC2	100	75.427	Bos_taurus
ENSHCOG00000019130	exosc2	97	40.690	WBGene00022232	exos-2	96	40.690	Caenorhabditis_elegans
ENSHCOG00000019130	exosc2	100	75.427	ENSCJAG00000020537	EXOSC2	100	75.427	Callithrix_jacchus
ENSHCOG00000019130	exosc2	99	74.658	ENSCAFG00000019941	EXOSC2	99	74.658	Canis_familiaris
ENSHCOG00000019130	exosc2	100	74.744	ENSCAFG00020024047	EXOSC2	100	74.744	Canis_lupus_dingo
ENSHCOG00000019130	exosc2	100	75.768	ENSCHIG00000021398	EXOSC2	100	75.768	Capra_hircus
ENSHCOG00000019130	exosc2	100	75.427	ENSTSYG00000001805	EXOSC2	100	75.427	Carlito_syrichta
ENSHCOG00000019130	exosc2	100	72.635	ENSCPOG00000005902	EXOSC2	100	72.635	Cavia_porcellus
ENSHCOG00000019130	exosc2	100	75.427	ENSCCAG00000019749	EXOSC2	100	75.427	Cebus_capucinus
ENSHCOG00000019130	exosc2	100	75.427	ENSCATG00000025389	-	100	75.427	Cercocebus_atys
ENSHCOG00000019130	exosc2	100	75.427	ENSCLAG00000006195	EXOSC2	100	75.427	Chinchilla_lanigera
ENSHCOG00000019130	exosc2	100	75.427	ENSCSAG00000014760	EXOSC2	100	75.427	Chlorocebus_sabaeus
ENSHCOG00000019130	exosc2	100	74.403	ENSCHOG00000000858	EXOSC2	100	74.403	Choloepus_hoffmanni
ENSHCOG00000019130	exosc2	99	76.027	ENSCPBG00000022626	EXOSC2	99	76.027	Chrysemys_picta_bellii
ENSHCOG00000019130	exosc2	96	61.754	ENSCING00000014934	-	94	61.754	Ciona_intestinalis
ENSHCOG00000019130	exosc2	91	65.934	ENSCSAVG00000003684	-	99	65.934	Ciona_savignyi
ENSHCOG00000019130	exosc2	100	75.427	ENSCANG00000039828	-	100	75.427	Colobus_angolensis_palliatus
ENSHCOG00000019130	exosc2	99	68.836	ENSCANG00000029298	-	99	68.836	Colobus_angolensis_palliatus
ENSHCOG00000019130	exosc2	100	75.427	ENSCGRG00001013981	Exosc2	100	75.427	Cricetulus_griseus_chok1gshd
ENSHCOG00000019130	exosc2	100	75.427	ENSCGRG00000017629	Exosc2	100	75.427	Cricetulus_griseus_crigri
ENSHCOG00000019130	exosc2	100	90.785	ENSCSEG00000016539	exosc2	100	90.785	Cynoglossus_semilaevis
ENSHCOG00000019130	exosc2	100	92.150	ENSCVAG00000022260	exosc2	100	92.150	Cyprinodon_variegatus
ENSHCOG00000019130	exosc2	100	80.339	ENSDARG00000028688	exosc2	100	80.339	Danio_rerio
ENSHCOG00000019130	exosc2	91	75.281	ENSDNOG00000025767	-	100	75.281	Dasypus_novemcinctus
ENSHCOG00000019130	exosc2	100	75.768	ENSDORG00000009238	Exosc2	100	75.768	Dipodomys_ordii
ENSHCOG00000019130	exosc2	94	57.840	FBgn0034879	Rrp4	96	58.885	Drosophila_melanogaster
ENSHCOG00000019130	exosc2	95	62.455	ENSETEG00000016130	-	100	62.455	Echinops_telfairi
ENSHCOG00000019130	exosc2	100	75.085	ENSEASG00005008475	EXOSC2	86	75.085	Equus_asinus_asinus
ENSHCOG00000019130	exosc2	100	75.085	ENSECAG00000007897	EXOSC2	86	75.085	Equus_caballus
ENSHCOG00000019130	exosc2	100	90.847	ENSELUG00000013641	exosc2	100	90.847	Esox_lucius
ENSHCOG00000019130	exosc2	100	75.427	ENSFCAG00000025936	EXOSC2	100	75.427	Felis_catus
ENSHCOG00000019130	exosc2	100	73.129	ENSFALG00000001446	EXOSC2	100	73.129	Ficedula_albicollis
ENSHCOG00000019130	exosc2	100	73.720	ENSFDAG00000017196	EXOSC2	100	73.720	Fukomys_damarensis
ENSHCOG00000019130	exosc2	100	92.833	ENSFHEG00000018571	exosc2	100	92.833	Fundulus_heteroclitus
ENSHCOG00000019130	exosc2	100	85.811	ENSGMOG00000011785	exosc2	99	85.811	Gadus_morhua
ENSHCOG00000019130	exosc2	99	79.110	ENSGALG00000040373	EXOSC2	99	79.110	Gallus_gallus
ENSHCOG00000019130	exosc2	99	91.781	ENSGAFG00000010283	exosc2	99	91.781	Gambusia_affinis
ENSHCOG00000019130	exosc2	100	90.102	ENSGACG00000016805	exosc2	99	90.361	Gasterosteus_aculeatus
ENSHCOG00000019130	exosc2	87	79.216	ENSGAGG00000021026	EXOSC2	96	79.216	Gopherus_agassizii
ENSHCOG00000019130	exosc2	100	74.744	ENSGGOG00000010578	EXOSC2	100	74.744	Gorilla_gorilla
ENSHCOG00000019130	exosc2	100	94.198	ENSHBUG00000022437	exosc2	100	94.198	Haplochromis_burtoni
ENSHCOG00000019130	exosc2	100	74.744	ENSHGLG00000012834	EXOSC2	100	74.744	Heterocephalus_glaber_female
ENSHCOG00000019130	exosc2	100	74.744	ENSHGLG00100007092	EXOSC2	100	74.744	Heterocephalus_glaber_male
ENSHCOG00000019130	exosc2	100	82.993	ENSIPUG00000015397	exosc2	100	82.993	Ictalurus_punctatus
ENSHCOG00000019130	exosc2	100	75.427	ENSSTOG00000005999	EXOSC2	100	75.427	Ictidomys_tridecemlineatus
ENSHCOG00000019130	exosc2	100	75.427	ENSJJAG00000003188	Exosc2	100	75.427	Jaculus_jaculus
ENSHCOG00000019130	exosc2	99	90.753	ENSKMAG00000017397	exosc2	99	90.753	Kryptolebias_marmoratus
ENSHCOG00000019130	exosc2	100	91.468	ENSLBEG00000019269	exosc2	100	91.468	Labrus_bergylta
ENSHCOG00000019130	exosc2	100	77.551	ENSLACG00000015530	EXOSC2	100	77.551	Latimeria_chalumnae
ENSHCOG00000019130	exosc2	100	75.170	ENSLAFG00000006984	EXOSC2	100	75.170	Loxodonta_africana
ENSHCOG00000019130	exosc2	100	64.846	ENSMFAG00000034160	-	84	64.846	Macaca_fascicularis
ENSHCOG00000019130	exosc2	100	75.427	ENSMFAG00000000597	-	100	75.427	Macaca_fascicularis
ENSHCOG00000019130	exosc2	100	72.355	ENSMMUG00000012498	EXOSC2	100	72.355	Macaca_mulatta
ENSHCOG00000019130	exosc2	100	75.427	ENSMNEG00000031861	-	100	75.427	Macaca_nemestrina
ENSHCOG00000019130	exosc2	100	65.529	ENSMNEG00000028704	-	91	65.529	Macaca_nemestrina
ENSHCOG00000019130	exosc2	100	65.529	ENSMLEG00000029891	-	91	65.529	Mandrillus_leucophaeus
ENSHCOG00000019130	exosc2	100	75.427	ENSMLEG00000042587	-	100	75.427	Mandrillus_leucophaeus
ENSHCOG00000019130	exosc2	100	93.515	ENSMAMG00000012466	exosc2	100	93.515	Mastacembelus_armatus
ENSHCOG00000019130	exosc2	100	92.833	ENSMZEG00005018737	exosc2	100	92.833	Maylandia_zebra
ENSHCOG00000019130	exosc2	99	79.110	ENSMGAG00000005450	EXOSC2	99	79.110	Meleagris_gallopavo
ENSHCOG00000019130	exosc2	100	75.427	ENSMAUG00000008299	Exosc2	100	75.427	Mesocricetus_auratus
ENSHCOG00000019130	exosc2	100	75.768	ENSMICG00000015495	EXOSC2	100	75.768	Microcebus_murinus
ENSHCOG00000019130	exosc2	100	75.768	ENSMOCG00000008262	Exosc2	100	75.768	Microtus_ochrogaster
ENSHCOG00000019130	exosc2	100	91.809	ENSMMOG00000009616	exosc2	100	91.809	Mola_mola
ENSHCOG00000019130	exosc2	100	76.109	ENSMODG00000012114	EXOSC2	100	76.109	Monodelphis_domestica
ENSHCOG00000019130	exosc2	100	94.198	ENSMALG00000022132	exosc2	100	94.198	Monopterus_albus
ENSHCOG00000019130	exosc2	100	75.768	MGP_CAROLIEiJ_G0023415	Exosc2	100	75.768	Mus_caroli
ENSHCOG00000019130	exosc2	100	75.768	ENSMUSG00000039356	Exosc2	100	75.768	Mus_musculus
ENSHCOG00000019130	exosc2	100	75.427	MGP_PahariEiJ_G0024872	Exosc2	100	75.427	Mus_pahari
ENSHCOG00000019130	exosc2	100	75.768	MGP_SPRETEiJ_G0024332	Exosc2	100	75.768	Mus_spretus
ENSHCOG00000019130	exosc2	100	75.085	ENSMPUG00000012686	EXOSC2	100	75.085	Mustela_putorius_furo
ENSHCOG00000019130	exosc2	100	75.254	ENSMLUG00000008776	EXOSC2	100	75.254	Myotis_lucifugus
ENSHCOG00000019130	exosc2	100	75.085	ENSNGAG00000019383	Exosc2	100	75.085	Nannospalax_galili
ENSHCOG00000019130	exosc2	100	93.857	ENSNBRG00000005453	exosc2	100	93.857	Neolamprologus_brichardi
ENSHCOG00000019130	exosc2	100	75.427	ENSNLEG00000012533	EXOSC2	100	75.427	Nomascus_leucogenys
ENSHCOG00000019130	exosc2	100	60.410	ENSMEUG00000000795	EXOSC2	100	60.410	Notamacropus_eugenii
ENSHCOG00000019130	exosc2	56	78.788	ENSOPRG00000008688	EXOSC2	56	78.788	Ochotona_princeps
ENSHCOG00000019130	exosc2	87	77.559	ENSODEG00000019513	-	100	77.559	Octodon_degus
ENSHCOG00000019130	exosc2	100	74.403	ENSODEG00000016880	-	100	74.403	Octodon_degus
ENSHCOG00000019130	exosc2	100	93.515	ENSONIG00000014086	exosc2	100	93.515	Oreochromis_niloticus
ENSHCOG00000019130	exosc2	100	73.720	ENSOANG00000001044	EXOSC2	100	73.720	Ornithorhynchus_anatinus
ENSHCOG00000019130	exosc2	100	75.768	ENSOCUG00000007138	EXOSC2	100	75.768	Oryctolagus_cuniculus
ENSHCOG00000019130	exosc2	100	92.833	ENSORLG00000007443	exosc2	100	92.833	Oryzias_latipes
ENSHCOG00000019130	exosc2	100	92.491	ENSORLG00020018902	exosc2	100	92.491	Oryzias_latipes_hni
ENSHCOG00000019130	exosc2	100	92.150	ENSORLG00015006767	exosc2	100	92.150	Oryzias_latipes_hsok
ENSHCOG00000019130	exosc2	100	92.491	ENSOMEG00000003533	exosc2	100	92.491	Oryzias_melastigma
ENSHCOG00000019130	exosc2	100	75.427	ENSOGAG00000007558	EXOSC2	100	75.427	Otolemur_garnettii
ENSHCOG00000019130	exosc2	100	74.915	ENSOARG00000007438	EXOSC2	100	74.915	Ovis_aries
ENSHCOG00000019130	exosc2	100	75.427	ENSPPAG00000034796	EXOSC2	100	75.427	Pan_paniscus
ENSHCOG00000019130	exosc2	100	75.768	ENSPPRG00000001089	EXOSC2	100	75.768	Panthera_pardus
ENSHCOG00000019130	exosc2	100	75.768	ENSPTIG00000021163	EXOSC2	100	75.768	Panthera_tigris_altaica
ENSHCOG00000019130	exosc2	100	75.427	ENSPTRG00000021476	EXOSC2	100	75.427	Pan_troglodytes
ENSHCOG00000019130	exosc2	100	75.427	ENSPTRG00000045766	-	100	75.427	Pan_troglodytes
ENSHCOG00000019130	exosc2	100	75.427	ENSPANG00000025966	EXOSC2	100	75.427	Papio_anubis
ENSHCOG00000019130	exosc2	100	82.653	ENSPKIG00000004271	exosc2	100	82.653	Paramormyrops_kingsleyae
ENSHCOG00000019130	exosc2	99	75.685	ENSPSIG00000006743	EXOSC2	99	75.685	Pelodiscus_sinensis
ENSHCOG00000019130	exosc2	86	93.676	ENSPMGG00000010980	exosc2	99	93.676	Periophthalmus_magnuspinnatus
ENSHCOG00000019130	exosc2	100	75.768	ENSPEMG00000006345	Exosc2	100	75.768	Peromyscus_maniculatus_bairdii
ENSHCOG00000019130	exosc2	94	77.737	ENSPMAG00000001280	exosc2	93	77.737	Petromyzon_marinus
ENSHCOG00000019130	exosc2	100	75.768	ENSPCIG00000024122	EXOSC2	97	75.768	Phascolarctos_cinereus
ENSHCOG00000019130	exosc2	99	92.491	ENSPFOG00000019819	exosc2	99	92.491	Poecilia_formosa
ENSHCOG00000019130	exosc2	99	92.808	ENSPLAG00000004605	exosc2	99	92.808	Poecilia_latipinna
ENSHCOG00000019130	exosc2	99	92.808	ENSPMEG00000010976	exosc2	99	92.808	Poecilia_mexicana
ENSHCOG00000019130	exosc2	99	92.123	ENSPREG00000014306	exosc2	99	92.123	Poecilia_reticulata
ENSHCOG00000019130	exosc2	100	75.427	ENSPPYG00000019695	EXOSC2	100	75.427	Pongo_abelii
ENSHCOG00000019130	exosc2	100	76.109	ENSPCAG00000013400	EXOSC2	100	76.109	Procavia_capensis
ENSHCOG00000019130	exosc2	100	75.427	ENSPCOG00000017639	EXOSC2	100	75.427	Propithecus_coquereli
ENSHCOG00000019130	exosc2	100	74.744	ENSPVAG00000001513	EXOSC2	100	74.744	Pteropus_vampyrus
ENSHCOG00000019130	exosc2	100	94.198	ENSPNYG00000007383	exosc2	100	94.198	Pundamilia_nyererei
ENSHCOG00000019130	exosc2	100	86.395	ENSPNAG00000014281	exosc2	100	86.395	Pygocentrus_nattereri
ENSHCOG00000019130	exosc2	100	75.768	ENSRNOG00000009245	Exosc2	100	75.768	Rattus_norvegicus
ENSHCOG00000019130	exosc2	100	75.427	ENSRBIG00000031203	-	100	75.427	Rhinopithecus_bieti
ENSHCOG00000019130	exosc2	99	69.178	ENSRBIG00000029791	-	99	69.178	Rhinopithecus_bieti
ENSHCOG00000019130	exosc2	100	75.427	ENSRROG00000010827	-	100	75.427	Rhinopithecus_roxellana
ENSHCOG00000019130	exosc2	99	68.151	ENSRROG00000043609	-	99	68.151	Rhinopithecus_roxellana
ENSHCOG00000019130	exosc2	94	40.705	YHR069C	-	87	40.705	Saccharomyces_cerevisiae
ENSHCOG00000019130	exosc2	100	75.085	ENSSBOG00000022712	EXOSC2	100	75.085	Saimiri_boliviensis_boliviensis
ENSHCOG00000019130	exosc2	100	76.109	ENSSHAG00000016050	EXOSC2	100	76.109	Sarcophilus_harrisii
ENSHCOG00000019130	exosc2	100	84.642	ENSSFOG00015011245	exosc2	100	84.642	Scleropages_formosus
ENSHCOG00000019130	exosc2	100	92.491	ENSSMAG00000003112	exosc2	100	92.491	Scophthalmus_maximus
ENSHCOG00000019130	exosc2	100	92.568	ENSSDUG00000004634	exosc2	100	92.568	Seriola_dumerili
ENSHCOG00000019130	exosc2	100	93.515	ENSSLDG00000010616	exosc2	100	93.515	Seriola_lalandi_dorsalis
ENSHCOG00000019130	exosc2	99	76.610	ENSSPUG00000013391	EXOSC2	99	76.610	Sphenodon_punctatus
ENSHCOG00000019130	exosc2	100	93.857	ENSSPAG00000022947	exosc2	100	93.857	Stegastes_partitus
ENSHCOG00000019130	exosc2	100	76.792	ENSSSCG00000005704	EXOSC2	100	76.792	Sus_scrofa
ENSHCOG00000019130	exosc2	99	73.288	ENSTGUG00000004697	EXOSC2	99	73.288	Taeniopygia_guttata
ENSHCOG00000019130	exosc2	100	83.618	ENSTRUG00000022436	exosc2	100	83.618	Takifugu_rubripes
ENSHCOG00000019130	exosc2	100	70.648	ENSTTRG00000015159	EXOSC2	100	70.648	Tursiops_truncatus
ENSHCOG00000019130	exosc2	95	73.646	ENSUAMG00000009651	EXOSC2	99	73.646	Ursus_americanus
ENSHCOG00000019130	exosc2	100	75.085	ENSUMAG00000018726	EXOSC2	100	75.085	Ursus_maritimus
ENSHCOG00000019130	exosc2	100	74.744	ENSVVUG00000027665	EXOSC2	100	74.744	Vulpes_vulpes
ENSHCOG00000019130	exosc2	100	74.403	ENSXETG00000001340	exosc2	100	74.403	Xenopus_tropicalis
ENSHCOG00000019130	exosc2	99	91.781	ENSXMAG00000005265	exosc2	99	91.781	Xiphophorus_maculatus