EuRBPDB

Description

Ensembl ID: ENSHCOG00000019171 (Gene tree)
Gene ID: 109512678
Gene Symbol: pprc1
Alias: cb478|sb:cb478|wu:fb72d09|wu:fj86g08
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator-related 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8843 bases
Position: chrKV879831.1:344291-353133
Accession: 109512678
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000027394	RRM_1	PF00076.22	5.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023500	-	4077	XM_019864579	ENSHCOP00000027394	1232 (aa)	XP_019720138	UPI00094E5B6A

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019171	pprc1	78	50.930	ENSACIG00000022532	pprc1	76	51.157	Amphilophus_citrinellus
ENSHCOG00000019171	pprc1	100	52.729	ENSAOCG00000009477	pprc1	80	54.167	Amphiprion_ocellaris
ENSHCOG00000019171	pprc1	80	50.137	ENSATEG00000022844	pprc1	100	53.948	Anabas_testudineus
ENSHCOG00000019171	pprc1	100	48.015	ENSFHEG00000003893	pprc1	93	53.280	Fundulus_heteroclitus
ENSHCOG00000019171	pprc1	100	48.561	ENSHBUG00000001258	pprc1	100	49.375	Haplochromis_burtoni
ENSHCOG00000019171	pprc1	84	69.565	ENSLBEG00000015862	pprc1	94	69.872	Labrus_bergylta
ENSHCOG00000019171	pprc1	61	74.214	ENSONIG00000009509	pprc1	94	58.648	Oreochromis_niloticus
ENSHCOG00000019171	pprc1	97	49.303	ENSORLG00000008410	pprc1	99	49.884	Oryzias_latipes
ENSHCOG00000019171	pprc1	100	49.399	ENSOMEG00000002727	pprc1	100	49.887	Oryzias_melastigma
ENSHCOG00000019171	pprc1	100	48.804	ENSPFOG00000014566	pprc1	100	49.433	Poecilia_formosa
ENSHCOG00000019171	pprc1	100	48.353	ENSPMEG00000008399	pprc1	100	48.054	Poecilia_mexicana
ENSHCOG00000019171	pprc1	62	69.375	ENSPREG00000020657	pprc1	94	67.470	Poecilia_reticulata
ENSHCOG00000019171	pprc1	61	72.956	ENSSMAG00000003824	pprc1	58	72.956	Scophthalmus_maximus
ENSHCOG00000019171	pprc1	51	58.768	ENSSLDG00000002659	-	65	67.308	Seriola_lalandi_dorsalis
ENSHCOG00000019171	pprc1	80	46.485	ENSTRUG00000011524	pprc1	100	50.574	Takifugu_rubripes
ENSHCOG00000019171	pprc1	100	48.990	ENSXMAG00000013470	pprc1	100	48.724	Xiphophorus_maculatus