EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000019245 (Gene tree)
Gene ID: -
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 2771 bases
Position: chrKV880190.1:1612956-1615726
Accession: 109523327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000027416	MMR_HSR1	PF01926.23	4.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023548	-	1201	XM_019882402	ENSHCOP00000015595	219 (aa)	XP_019737961	-
ENSHCOT00000023541	-	591	-	ENSHCOP00000027416	196 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000019245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000019245	rabl3	63	30.645	ENSHCOG00000006538	si:dkey-16l2.16	55	30.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019245	rabl3	100	80.660	ENSG00000144840	RABL3	100	93.023	Homo_sapiens
ENSHCOG00000019245	rabl3	100	97.959	ENSAPOG00000024479	rabl3	100	97.959	Acanthochromis_polyacanthus
ENSHCOG00000019245	rabl3	100	74.153	ENSAMEG00000004809	RABL3	100	74.153	Ailuropoda_melanoleuca
ENSHCOG00000019245	rabl3	100	83.772	ENSACIG00000014343	rabl3	100	83.772	Amphilophus_citrinellus
ENSHCOG00000019245	rabl3	100	97.959	ENSAOCG00000011851	rabl3	100	97.959	Amphiprion_ocellaris
ENSHCOG00000019245	rabl3	91	97.207	ENSAPEG00000011214	rabl3	100	82.051	Amphiprion_percula
ENSHCOG00000019245	rabl3	91	98.876	ENSATEG00000003503	rabl3	100	85.778	Anabas_testudineus
ENSHCOG00000019245	rabl3	91	85.393	ENSACAG00000011313	-	75	85.393	Anolis_carolinensis
ENSHCOG00000019245	rabl3	100	83.019	ENSANAG00000027278	RABL3	100	83.019	Aotus_nancymaae
ENSHCOG00000019245	rabl3	100	93.659	ENSACLG00000009820	rabl3	100	93.659	Astatotilapia_calliptera
ENSHCOG00000019245	rabl3	100	80.258	ENSAMXG00000038716	rabl3	100	80.258	Astyanax_mexicanus
ENSHCOG00000019245	rabl3	100	74.576	ENSBTAG00000015898	RABL3	100	74.576	Bos_taurus
ENSHCOG00000019245	rabl3	100	83.019	ENSCJAG00000008611	RABL3	100	83.019	Callithrix_jacchus
ENSHCOG00000019245	rabl3	100	74.153	ENSCAFG00000011292	RABL3	89	74.153	Canis_familiaris
ENSHCOG00000019245	rabl3	100	74.153	ENSCAFG00020006397	RABL3	100	74.153	Canis_lupus_dingo
ENSHCOG00000019245	rabl3	100	74.576	ENSCHIG00000017365	RABL3	100	74.576	Capra_hircus
ENSHCOG00000019245	rabl3	100	72.881	ENSCPOG00000009645	RABL3	100	72.881	Cavia_porcellus
ENSHCOG00000019245	rabl3	100	81.132	ENSCATG00000032561	RABL3	100	81.132	Cercocebus_atys
ENSHCOG00000019245	rabl3	100	72.458	ENSCLAG00000010855	RABL3	100	72.458	Chinchilla_lanigera
ENSHCOG00000019245	rabl3	98	72.532	ENSCSAG00000007155	RABL3	100	72.532	Chlorocebus_sabaeus
ENSHCOG00000019245	rabl3	100	73.305	ENSCPBG00000001999	RABL3	100	73.305	Chrysemys_picta_bellii
ENSHCOG00000019245	rabl3	100	81.132	ENSCANG00000031684	RABL3	100	81.132	Colobus_angolensis_palliatus
ENSHCOG00000019245	rabl3	100	71.186	ENSCGRG00001021537	Rabl3	100	71.186	Cricetulus_griseus_chok1gshd
ENSHCOG00000019245	rabl3	100	71.186	ENSCGRG00000002114	Rabl3	100	71.186	Cricetulus_griseus_crigri
ENSHCOG00000019245	rabl3	100	89.524	ENSCSEG00000014982	rabl3	100	89.524	Cynoglossus_semilaevis
ENSHCOG00000019245	rabl3	100	95.408	ENSCVAG00000009904	rabl3	100	95.408	Cyprinodon_variegatus
ENSHCOG00000019245	rabl3	100	78.112	ENSDARG00000040959	rabl3	93	94.531	Danio_rerio
ENSHCOG00000019245	rabl3	100	72.034	ENSDNOG00000008174	RABL3	100	72.034	Dasypus_novemcinctus
ENSHCOG00000019245	rabl3	100	72.458	ENSETEG00000010206	RABL3	100	72.458	Echinops_telfairi
ENSHCOG00000019245	rabl3	91	91.011	ENSECAG00000023059	RABL3	100	74.153	Equus_caballus
ENSHCOG00000019245	rabl3	100	68.644	ENSEEUG00000002897	RABL3	100	68.644	Erinaceus_europaeus
ENSHCOG00000019245	rabl3	100	93.367	ENSELUG00000014758	rabl3	100	93.367	Esox_lucius
ENSHCOG00000019245	rabl3	100	82.547	ENSFCAG00000031879	RABL3	100	82.547	Felis_catus
ENSHCOG00000019245	rabl3	100	71.186	ENSFALG00000005296	RABL3	100	71.186	Ficedula_albicollis
ENSHCOG00000019245	rabl3	100	73.617	ENSFDAG00000000307	RABL3	100	73.617	Fukomys_damarensis
ENSHCOG00000019245	rabl3	91	96.067	ENSFHEG00000011273	rabl3	100	80.258	Fundulus_heteroclitus
ENSHCOG00000019245	rabl3	100	80.258	ENSGMOG00000007845	rabl3	100	80.258	Gadus_morhua
ENSHCOG00000019245	rabl3	100	72.034	ENSGALG00000014949	RABL3	100	72.034	Gallus_gallus
ENSHCOG00000019245	rabl3	100	93.367	ENSGAFG00000015953	rabl3	100	93.367	Gambusia_affinis
ENSHCOG00000019245	rabl3	100	79.828	ENSGACG00000007387	rabl3	100	96.899	Gasterosteus_aculeatus
ENSHCOG00000019245	rabl3	100	73.729	ENSGAGG00000003677	RABL3	100	73.729	Gopherus_agassizii
ENSHCOG00000019245	rabl3	100	80.660	ENSGGOG00000006059	RABL3	100	80.660	Gorilla_gorilla
ENSHCOG00000019245	rabl3	91	98.315	ENSHBUG00000019478	rabl3	93	82.833	Haplochromis_burtoni
ENSHCOG00000019245	rabl3	100	73.191	ENSHGLG00000014491	RABL3	100	73.191	Heterocephalus_glaber_female
ENSHCOG00000019245	rabl3	100	73.191	ENSHGLG00100004866	RABL3	100	73.191	Heterocephalus_glaber_male
ENSHCOG00000019245	rabl3	91	93.258	ENSIPUG00000012657	rabl3	100	78.541	Ictalurus_punctatus
ENSHCOG00000019245	rabl3	100	73.305	ENSSTOG00000019452	RABL3	100	73.305	Ictidomys_tridecemlineatus
ENSHCOG00000019245	rabl3	100	81.132	ENSJJAG00000023553	Rabl3	100	81.132	Jaculus_jaculus
ENSHCOG00000019245	rabl3	100	90.000	ENSKMAG00000015464	rabl3	100	90.000	Kryptolebias_marmoratus
ENSHCOG00000019245	rabl3	100	86.818	ENSLBEG00000010627	-	100	86.818	Labrus_bergylta
ENSHCOG00000019245	rabl3	100	86.818	ENSLBEG00000020595	rabl3	100	86.818	Labrus_bergylta
ENSHCOG00000019245	rabl3	100	74.576	ENSLOCG00000006265	rabl3	100	74.576	Lepisosteus_oculatus
ENSHCOG00000019245	rabl3	100	74.153	ENSLAFG00000003711	RABL3	100	74.153	Loxodonta_africana
ENSHCOG00000019245	rabl3	100	81.132	ENSMFAG00000031923	RABL3	100	81.132	Macaca_fascicularis
ENSHCOG00000019245	rabl3	100	81.132	ENSMMUG00000001594	RABL3	100	81.132	Macaca_mulatta
ENSHCOG00000019245	rabl3	100	81.132	ENSMNEG00000043980	RABL3	100	81.132	Macaca_nemestrina
ENSHCOG00000019245	rabl3	100	81.132	ENSMLEG00000028177	RABL3	100	81.132	Mandrillus_leucophaeus
ENSHCOG00000019245	rabl3	100	82.403	ENSMAMG00000015155	rabl3	100	82.403	Mastacembelus_armatus
ENSHCOG00000019245	rabl3	100	93.659	ENSMZEG00005002607	rabl3	100	93.659	Maylandia_zebra
ENSHCOG00000019245	rabl3	100	71.186	ENSMAUG00000013022	Rabl3	100	71.186	Mesocricetus_auratus
ENSHCOG00000019245	rabl3	100	82.075	ENSMICG00000049288	RABL3	100	82.075	Microcebus_murinus
ENSHCOG00000019245	rabl3	100	71.186	ENSMOCG00000015237	Rabl3	100	71.186	Microtus_ochrogaster
ENSHCOG00000019245	rabl3	100	84.211	ENSMMOG00000005628	rabl3	100	84.211	Mola_mola
ENSHCOG00000019245	rabl3	100	72.034	ENSMODG00000018232	RABL3	100	72.034	Monodelphis_domestica
ENSHCOG00000019245	rabl3	100	78.814	ENSMALG00000018837	rabl3	100	78.814	Monopterus_albus
ENSHCOG00000019245	rabl3	91	88.764	MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	Mus_caroli
ENSHCOG00000019245	rabl3	91	88.764	ENSMUSG00000022827	Rabl3	100	92.248	Mus_musculus
ENSHCOG00000019245	rabl3	100	70.763	MGP_PahariEiJ_G0016429	Rabl3	100	92.248	Mus_pahari
ENSHCOG00000019245	rabl3	91	88.764	MGP_SPRETEiJ_G0021628	Rabl3	100	92.248	Mus_spretus
ENSHCOG00000019245	rabl3	100	74.153	ENSMPUG00000008257	RABL3	89	74.153	Mustela_putorius_furo
ENSHCOG00000019245	rabl3	100	72.881	ENSMLUG00000014113	RABL3	100	72.881	Myotis_lucifugus
ENSHCOG00000019245	rabl3	98	81.553	ENSNGAG00000001939	Rabl3	99	81.553	Nannospalax_galili
ENSHCOG00000019245	rabl3	91	98.876	ENSNBRG00000012423	rabl3	76	98.876	Neolamprologus_brichardi
ENSHCOG00000019245	rabl3	100	80.660	ENSNLEG00000031723	RABL3	100	80.660	Nomascus_leucogenys
ENSHCOG00000019245	rabl3	100	71.610	ENSMEUG00000006606	RABL3	100	71.610	Notamacropus_eugenii
ENSHCOG00000019245	rabl3	100	72.458	ENSODEG00000004758	-	100	72.458	Octodon_degus
ENSHCOG00000019245	rabl3	100	83.262	ENSONIG00000004281	rabl3	100	83.262	Oreochromis_niloticus
ENSHCOG00000019245	rabl3	99	72.222	ENSOANG00000003928	RABL3	99	72.222	Ornithorhynchus_anatinus
ENSHCOG00000019245	rabl3	91	96.067	ENSORLG00000020457	rabl3	100	80.258	Oryzias_latipes
ENSHCOG00000019245	rabl3	100	84.234	ENSORLG00020008991	rabl3	100	84.234	Oryzias_latipes_hni
ENSHCOG00000019245	rabl3	100	80.258	ENSORLG00015005649	rabl3	88	80.258	Oryzias_latipes_hsok
ENSHCOG00000019245	rabl3	100	85.135	ENSOMEG00000015066	rabl3	100	85.135	Oryzias_melastigma
ENSHCOG00000019245	rabl3	100	72.881	ENSOGAG00000005961	RABL3	100	72.881	Otolemur_garnettii
ENSHCOG00000019245	rabl3	100	74.576	ENSOARG00000019939	RABL3	100	74.576	Ovis_aries
ENSHCOG00000019245	rabl3	93	78.788	ENSPPAG00000036997	RABL3	86	78.788	Pan_paniscus
ENSHCOG00000019245	rabl3	100	82.547	ENSPPRG00000016325	RABL3	100	82.547	Panthera_pardus
ENSHCOG00000019245	rabl3	100	82.547	ENSPTIG00000018021	RABL3	100	82.547	Panthera_tigris_altaica
ENSHCOG00000019245	rabl3	100	80.660	ENSPTRG00000015272	RABL3	100	80.660	Pan_troglodytes
ENSHCOG00000019245	rabl3	100	81.132	ENSPANG00000001339	RABL3	100	81.132	Papio_anubis
ENSHCOG00000019245	rabl3	100	94.388	ENSPKIG00000007818	rabl3	100	94.388	Paramormyrops_kingsleyae
ENSHCOG00000019245	rabl3	100	72.881	ENSPSIG00000011358	RABL3	100	72.881	Pelodiscus_sinensis
ENSHCOG00000019245	rabl3	100	84.615	ENSPMGG00000015794	rabl3	100	84.615	Periophthalmus_magnuspinnatus
ENSHCOG00000019245	rabl3	100	71.186	ENSPEMG00000016913	Rabl3	100	71.186	Peromyscus_maniculatus_bairdii
ENSHCOG00000019245	rabl3	100	71.610	ENSPCIG00000018922	RABL3	100	71.610	Phascolarctos_cinereus
ENSHCOG00000019245	rabl3	100	81.116	ENSPFOG00000008586	rabl3	100	81.116	Poecilia_formosa
ENSHCOG00000019245	rabl3	100	96.429	ENSPLAG00000014482	rabl3	100	96.429	Poecilia_latipinna
ENSHCOG00000019245	rabl3	100	96.429	ENSPMEG00000002295	rabl3	100	96.429	Poecilia_mexicana
ENSHCOG00000019245	rabl3	100	95.918	ENSPREG00000014815	rabl3	100	95.918	Poecilia_reticulata
ENSHCOG00000019245	rabl3	100	72.881	ENSPPYG00000013501	RABL3	100	72.881	Pongo_abelii
ENSHCOG00000019245	rabl3	100	82.547	ENSPCOG00000022230	RABL3	100	82.547	Propithecus_coquereli
ENSHCOG00000019245	rabl3	100	72.034	ENSPVAG00000010013	RABL3	100	72.034	Pteropus_vampyrus
ENSHCOG00000019245	rabl3	100	94.146	ENSPNYG00000006659	rabl3	100	94.146	Pundamilia_nyererei
ENSHCOG00000019245	rabl3	100	96.939	ENSPNAG00000000748	rabl3	100	96.939	Pygocentrus_nattereri
ENSHCOG00000019245	rabl3	91	88.764	ENSRNOG00000026085	Rabl3	75	88.764	Rattus_norvegicus
ENSHCOG00000019245	rabl3	100	81.132	ENSRBIG00000040941	RABL3	100	81.132	Rhinopithecus_bieti
ENSHCOG00000019245	rabl3	100	81.132	ENSRROG00000043745	RABL3	100	81.132	Rhinopithecus_roxellana
ENSHCOG00000019245	rabl3	100	83.019	ENSSBOG00000004022	RABL3	100	83.019	Saimiri_boliviensis_boliviensis
ENSHCOG00000019245	rabl3	100	70.763	ENSSHAG00000012233	RABL3	100	70.763	Sarcophilus_harrisii
ENSHCOG00000019245	rabl3	100	80.687	ENSSFOG00015010171	rabl3	100	80.687	Scleropages_formosus
ENSHCOG00000019245	rabl3	100	90.995	ENSSMAG00000002403	rabl3	100	90.995	Scophthalmus_maximus
ENSHCOG00000019245	rabl3	100	95.122	ENSSDUG00000012078	rabl3	100	95.122	Seriola_dumerili
ENSHCOG00000019245	rabl3	100	94.634	ENSSLDG00000021899	rabl3	100	94.634	Seriola_lalandi_dorsalis
ENSHCOG00000019245	rabl3	100	73.729	ENSSARG00000008316	RABL3	100	73.729	Sorex_araneus
ENSHCOG00000019245	rabl3	100	72.034	ENSSPUG00000017490	RABL3	100	72.034	Sphenodon_punctatus
ENSHCOG00000019245	rabl3	91	97.753	ENSSPAG00000011642	rabl3	100	84.956	Stegastes_partitus
ENSHCOG00000019245	rabl3	100	82.547	ENSSSCG00000035258	RABL3	100	82.547	Sus_scrofa
ENSHCOG00000019245	rabl3	100	71.186	ENSTGUG00000013374	RABL3	100	71.186	Taeniopygia_guttata
ENSHCOG00000019245	rabl3	91	96.648	ENSTRUG00000007846	RABL3	100	97.656	Takifugu_rubripes
ENSHCOG00000019245	rabl3	72	92.254	ENSTBEG00000005153	RABL3	60	92.254	Tupaia_belangeri
ENSHCOG00000019245	rabl3	100	74.153	ENSUAMG00000005299	RABL3	100	74.153	Ursus_americanus
ENSHCOG00000019245	rabl3	100	73.729	ENSUMAG00000025256	RABL3	89	73.729	Ursus_maritimus
ENSHCOG00000019245	rabl3	100	74.153	ENSVPAG00000003776	RABL3	100	74.153	Vicugna_pacos
ENSHCOG00000019245	rabl3	100	74.153	ENSVVUG00000022300	RABL3	89	74.153	Vulpes_vulpes
ENSHCOG00000019245	rabl3	100	89.855	ENSXMAG00000003244	rabl3	100	89.855	Xiphophorus_maculatus