EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000019338 (Gene tree)
Gene ID: 109528547
Gene Symbol: ddx23
Alias: wu:fi39b12|zgc:63742
Full Name: DEAD-box helicase 23
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8099 bases
Position: chrKV880338.1:6056939-6065037
Accession: 109528547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015623	DEAD	PF00270.29	9.3e-53	1	1
ENSHCOP00000027458	DEAD	PF00270.29	1.1e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023617	-	2749	XM_019891313	ENSHCOP00000027458	803 (aa)	XP_019746872	UPI00094E464C
ENSHCOT00000023602	-	2289	-	ENSHCOP00000015623	762 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000019338's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000019338	ddx23	55	39.151	ENSHCOG00000019168	DDX5	61	39.474
ENSHCOG00000019338	ddx23	54	39.474	ENSHCOG00000017168	-	64	38.724
ENSHCOG00000019338	ddx23	54	38.263	ENSHCOG00000016890	-	57	40.511
ENSHCOG00000019338	ddx23	54	34.878	ENSHCOG00000005496	ddx47	78	34.878
ENSHCOG00000019338	ddx23	53	30.657	ENSHCOG00000020703	eif4a2	91	30.657
ENSHCOG00000019338	ddx23	55	40.330	ENSHCOG00000008800	ddx5	64	40.330
ENSHCOG00000019338	ddx23	55	38.028	ENSHCOG00000018337	ddx4	67	38.028
ENSHCOG00000019338	ddx23	56	39.773	ENSHCOG00000004725	DDX41	66	39.414
ENSHCOG00000019338	ddx23	54	30.896	ENSHCOG00000008184	ddx61	78	30.918
ENSHCOG00000019338	ddx23	54	30.896	ENSHCOG00000012238	-	76	30.896
ENSHCOG00000019338	ddx23	54	31.368	ENSHCOG00000012451	ddx6	76	31.368
ENSHCOG00000019338	ddx23	51	30.266	ENSHCOG00000020998	ddx31	61	30.266
ENSHCOG00000019338	ddx23	55	39.578	ENSHCOG00000003357	ddx42	57	39.578
ENSHCOG00000019338	ddx23	57	33.787	ENSHCOG00000009983	ddx59	65	33.787
ENSHCOG00000019338	ddx23	54	38.498	ENSHCOG00000006275	-	56	38.498
ENSHCOG00000019338	ddx23	53	42.233	ENSHCOG00000014704	ddx43	58	42.233
ENSHCOG00000019338	ddx23	55	38.479	ENSHCOG00000006456	-	63	37.694

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019338	ddx23	93	88.874	ENSG00000174243	DDX23	83	91.935	Homo_sapiens
ENSHCOG00000019338	ddx23	100	93.672	ENSAPOG00000003760	ddx23	100	94.293	Acanthochromis_polyacanthus
ENSHCOG00000019338	ddx23	100	84.019	ENSAMEG00000007123	DDX23	83	91.789	Ailuropoda_melanoleuca
ENSHCOG00000019338	ddx23	100	90.420	ENSACIG00000000022	ddx23	100	90.327	Amphilophus_citrinellus
ENSHCOG00000019338	ddx23	100	93.672	ENSAOCG00000017348	ddx23	100	94.293	Amphiprion_ocellaris
ENSHCOG00000019338	ddx23	100	93.781	ENSAPEG00000016857	ddx23	100	94.030	Amphiprion_percula
ENSHCOG00000019338	ddx23	100	93.300	ENSATEG00000016800	ddx23	100	93.548	Anabas_testudineus
ENSHCOG00000019338	ddx23	91	79.650	ENSAPLG00000002868	DDX23	83	84.503	Anas_platyrhynchos
ENSHCOG00000019338	ddx23	100	82.750	ENSACAG00000025589	DDX23	96	82.725	Anolis_carolinensis
ENSHCOG00000019338	ddx23	93	89.008	ENSANAG00000018663	DDX23	83	92.082	Aotus_nancymaae
ENSHCOG00000019338	ddx23	100	87.730	ENSAMXG00000017597	ddx23	100	88.575	Astyanax_mexicanus
ENSHCOG00000019338	ddx23	93	88.400	ENSBTAG00000021810	DDX23	83	91.935	Bos_taurus
ENSHCOG00000019338	ddx23	93	89.008	ENSCJAG00000020775	DDX23	83	92.082	Callithrix_jacchus
ENSHCOG00000019338	ddx23	93	88.740	ENSCAFG00000025422	DDX23	83	91.935	Canis_familiaris
ENSHCOG00000019338	ddx23	93	88.740	ENSCAFG00020013383	DDX23	83	91.935	Canis_lupus_dingo
ENSHCOG00000019338	ddx23	93	88.267	ENSCHIG00000018783	DDX23	83	91.789	Capra_hircus
ENSHCOG00000019338	ddx23	100	83.535	ENSTSYG00000005429	DDX23	83	91.789	Carlito_syrichta
ENSHCOG00000019338	ddx23	93	89.128	ENSCPOG00000003278	DDX23	86	90.510	Cavia_porcellus
ENSHCOG00000019338	ddx23	81	95.000	ENSCCAG00000029177	DDX23	80	95.000	Cebus_capucinus
ENSHCOG00000019338	ddx23	93	88.874	ENSCATG00000039797	DDX23	83	91.935	Cercocebus_atys
ENSHCOG00000019338	ddx23	100	71.640	ENSCATG00000032335	-	85	78.739	Cercocebus_atys
ENSHCOG00000019338	ddx23	100	83.879	ENSCLAG00000002986	DDX23	86	90.368	Chinchilla_lanigera
ENSHCOG00000019338	ddx23	93	88.874	ENSCSAG00000006240	DDX23	83	91.935	Chlorocebus_sabaeus
ENSHCOG00000019338	ddx23	75	87.459	ENSCHOG00000009027	DDX23	80	90.909	Choloepus_hoffmanni
ENSHCOG00000019338	ddx23	100	83.538	ENSCPBG00000019988	DDX23	84	92.082	Chrysemys_picta_bellii
ENSHCOG00000019338	ddx23	97	68.327	ENSCING00000001913	-	90	73.153	Ciona_intestinalis
ENSHCOG00000019338	ddx23	87	66.163	ENSCSAVG00000004158	-	100	66.716	Ciona_savignyi
ENSHCOG00000019338	ddx23	100	70.123	ENSCANG00000042510	-	100	67.259	Colobus_angolensis_palliatus
ENSHCOG00000019338	ddx23	89	89.902	ENSCANG00000040182	DDX23	96	91.935	Colobus_angolensis_palliatus
ENSHCOG00000019338	ddx23	93	88.740	ENSCGRG00001015090	Ddx23	83	92.082	Cricetulus_griseus_chok1gshd
ENSHCOG00000019338	ddx23	93	88.740	ENSCGRG00000016314	Ddx23	83	92.082	Cricetulus_griseus_crigri
ENSHCOG00000019338	ddx23	87	95.303	ENSCSEG00000020970	ddx23	100	89.026	Cynoglossus_semilaevis
ENSHCOG00000019338	ddx23	100	92.680	ENSCVAG00000015745	ddx23	100	90.943	Cyprinodon_variegatus
ENSHCOG00000019338	ddx23	87	94.554	ENSDARG00000021945	ddx23	100	88.054	Danio_rerio
ENSHCOG00000019338	ddx23	92	89.160	ENSDNOG00000043176	DDX23	83	92.082	Dasypus_novemcinctus
ENSHCOG00000019338	ddx23	100	84.140	ENSDORG00000012659	Ddx23	83	91.935	Dipodomys_ordii
ENSHCOG00000019338	ddx23	93	66.403	FBgn0032690	CG10333	72	76.174	Drosophila_melanogaster
ENSHCOG00000019338	ddx23	92	85.599	ENSETEG00000015816	DDX23	84	89.003	Echinops_telfairi
ENSHCOG00000019338	ddx23	87	80.896	ENSEBUG00000003319	ddx23	93	84.697	Eptatretus_burgeri
ENSHCOG00000019338	ddx23	94	88.507	ENSEASG00005000455	DDX23	83	91.935	Equus_asinus_asinus
ENSHCOG00000019338	ddx23	100	84.140	ENSECAG00000016681	DDX23	83	91.935	Equus_caballus
ENSHCOG00000019338	ddx23	100	75.966	ENSEEUG00000009658	DDX23	83	83.284	Erinaceus_europaeus
ENSHCOG00000019338	ddx23	100	88.916	ENSELUG00000015358	ddx23	100	88.684	Esox_lucius
ENSHCOG00000019338	ddx23	93	88.740	ENSFCAG00000000082	DDX23	83	91.935	Felis_catus
ENSHCOG00000019338	ddx23	94	84.768	ENSFALG00000000133	DDX23	100	80.732	Ficedula_albicollis
ENSHCOG00000019338	ddx23	93	88.993	ENSFDAG00000017059	DDX23	86	90.368	Fukomys_damarensis
ENSHCOG00000019338	ddx23	100	91.563	ENSFHEG00000017499	ddx23	100	89.950	Fundulus_heteroclitus
ENSHCOG00000019338	ddx23	99	88.161	ENSGMOG00000009592	ddx23	90	91.643	Gadus_morhua
ENSHCOG00000019338	ddx23	93	87.952	ENSGALG00000032307	DDX23	87	89.689	Gallus_gallus
ENSHCOG00000019338	ddx23	100	92.184	ENSGAFG00000012366	ddx23	100	91.811	Gambusia_affinis
ENSHCOG00000019338	ddx23	99	90.727	ENSGACG00000003024	ddx23	99	95.134	Gasterosteus_aculeatus
ENSHCOG00000019338	ddx23	100	83.538	ENSGAGG00000007790	DDX23	87	90.537	Gopherus_agassizii
ENSHCOG00000019338	ddx23	93	88.874	ENSGGOG00000015252	DDX23	100	93.750	Gorilla_gorilla
ENSHCOG00000019338	ddx23	100	93.921	ENSHBUG00000011876	ddx23	100	93.921	Haplochromis_burtoni
ENSHCOG00000019338	ddx23	93	88.993	ENSHGLG00000004292	DDX23	86	90.368	Heterocephalus_glaber_female
ENSHCOG00000019338	ddx23	93	88.993	ENSHGLG00100017585	DDX23	86	90.368	Heterocephalus_glaber_male
ENSHCOG00000019338	ddx23	100	89.136	ENSIPUG00000005247	DDX23	100	89.383	Ictalurus_punctatus
ENSHCOG00000019338	ddx23	93	88.740	ENSSTOG00000004219	DDX23	83	92.082	Ictidomys_tridecemlineatus
ENSHCOG00000019338	ddx23	92	89.024	ENSJJAG00000018994	Ddx23	83	91.935	Jaculus_jaculus
ENSHCOG00000019338	ddx23	100	92.054	ENSKMAG00000012060	ddx23	100	91.198	Kryptolebias_marmoratus
ENSHCOG00000019338	ddx23	100	92.184	ENSLBEG00000019475	ddx23	100	90.447	Labrus_bergylta
ENSHCOG00000019338	ddx23	94	88.212	ENSLACG00000016977	DDX23	94	90.793	Latimeria_chalumnae
ENSHCOG00000019338	ddx23	90	92.011	ENSLOCG00000007385	ddx23	100	87.042	Lepisosteus_oculatus
ENSHCOG00000019338	ddx23	93	88.606	ENSLAFG00000014227	DDX23	83	91.789	Loxodonta_africana
ENSHCOG00000019338	ddx23	93	88.874	ENSMFAG00000038666	DDX23	83	91.935	Macaca_fascicularis
ENSHCOG00000019338	ddx23	93	88.874	ENSMMUG00000008432	DDX23	100	93.750	Macaca_mulatta
ENSHCOG00000019338	ddx23	93	88.606	ENSMNEG00000040016	DDX23	83	91.642	Macaca_nemestrina
ENSHCOG00000019338	ddx23	100	71.429	ENSMNEG00000045260	-	84	77.859	Macaca_nemestrina
ENSHCOG00000019338	ddx23	100	70.705	ENSMLEG00000035096	-	87	77.713	Mandrillus_leucophaeus
ENSHCOG00000019338	ddx23	93	88.874	ENSMLEG00000042846	DDX23	83	91.935	Mandrillus_leucophaeus
ENSHCOG00000019338	ddx23	100	93.921	ENSMAMG00000024144	ddx23	100	93.052	Mastacembelus_armatus
ENSHCOG00000019338	ddx23	100	93.921	ENSMZEG00005026086	ddx23	100	93.921	Maylandia_zebra
ENSHCOG00000019338	ddx23	93	88.859	ENSMAUG00000012336	Ddx23	86	90.368	Mesocricetus_auratus
ENSHCOG00000019338	ddx23	92	89.024	ENSMICG00000017541	DDX23	83	91.935	Microcebus_murinus
ENSHCOG00000019338	ddx23	92	88.829	ENSMOCG00000018987	Ddx23	83	92.082	Microtus_ochrogaster
ENSHCOG00000019338	ddx23	100	86.839	ENSMMOG00000012406	ddx23	100	87.097	Mola_mola
ENSHCOG00000019338	ddx23	90	89.684	ENSMODG00000009975	DDX23	83	92.229	Monodelphis_domestica
ENSHCOG00000019338	ddx23	100	92.680	ENSMALG00000022366	ddx23	100	91.667	Monopterus_albus
ENSHCOG00000019338	ddx23	92	88.694	MGP_CAROLIEiJ_G0020240	Ddx23	83	92.229	Mus_caroli
ENSHCOG00000019338	ddx23	92	88.560	ENSMUSG00000003360	Ddx23	83	92.082	Mus_musculus
ENSHCOG00000019338	ddx23	91	88.633	MGP_PahariEiJ_G0020243	Ddx23	83	92.082	Mus_pahari
ENSHCOG00000019338	ddx23	92	88.560	MGP_SPRETEiJ_G0021137	Ddx23	83	92.082	Mus_spretus
ENSHCOG00000019338	ddx23	93	88.874	ENSMPUG00000014739	DDX23	83	91.935	Mustela_putorius_furo
ENSHCOG00000019338	ddx23	92	88.993	ENSMLUG00000011033	-	83	92.229	Myotis_lucifugus
ENSHCOG00000019338	ddx23	100	80.387	ENSMLUG00000003683	-	81	88.502	Myotis_lucifugus
ENSHCOG00000019338	ddx23	100	83.656	ENSNGAG00000019018	Ddx23	83	91.935	Nannospalax_galili
ENSHCOG00000019338	ddx23	100	90.408	ENSNBRG00000022928	ddx23	100	90.408	Neolamprologus_brichardi
ENSHCOG00000019338	ddx23	93	81.501	ENSNLEG00000017864	DDX23	82	83.871	Nomascus_leucogenys
ENSHCOG00000019338	ddx23	90	89.684	ENSMEUG00000009477	DDX23	83	92.229	Notamacropus_eugenii
ENSHCOG00000019338	ddx23	92	89.024	ENSOPRG00000007170	-	83	91.935	Ochotona_princeps
ENSHCOG00000019338	ddx23	93	89.128	ENSODEG00000003592	DDX23	86	90.510	Octodon_degus
ENSHCOG00000019338	ddx23	100	93.921	ENSONIG00000017048	ddx23	100	93.921	Oreochromis_niloticus
ENSHCOG00000019338	ddx23	93	88.740	ENSOCUG00000001414	DDX23	83	92.082	Oryctolagus_cuniculus
ENSHCOG00000019338	ddx23	100	91.191	ENSORLG00000012330	ddx23	100	90.447	Oryzias_latipes
ENSHCOG00000019338	ddx23	100	91.315	ENSORLG00020017586	ddx23	100	90.571	Oryzias_latipes_hni
ENSHCOG00000019338	ddx23	100	88.976	ENSORLG00015012361	ddx23	100	88.976	Oryzias_latipes_hsok
ENSHCOG00000019338	ddx23	100	92.079	ENSOMEG00000006453	ddx23	100	91.213	Oryzias_melastigma
ENSHCOG00000019338	ddx23	93	89.008	ENSOGAG00000016813	DDX23	83	92.082	Otolemur_garnettii
ENSHCOG00000019338	ddx23	93	88.267	ENSOARG00000019105	DDX23	75	91.789	Ovis_aries
ENSHCOG00000019338	ddx23	100	62.149	ENSPPAG00000038775	-	81	67.576	Pan_paniscus
ENSHCOG00000019338	ddx23	93	88.874	ENSPPAG00000037807	DDX23	100	93.750	Pan_paniscus
ENSHCOG00000019338	ddx23	93	88.740	ENSPPRG00000015345	DDX23	83	91.935	Panthera_pardus
ENSHCOG00000019338	ddx23	93	88.740	ENSPTIG00000018873	DDX23	83	91.935	Panthera_tigris_altaica
ENSHCOG00000019338	ddx23	100	65.640	ENSPTRG00000051972	-	80	70.152	Pan_troglodytes
ENSHCOG00000019338	ddx23	93	88.740	ENSPTRG00000004887	DDX23	100	93.750	Pan_troglodytes
ENSHCOG00000019338	ddx23	88	83.735	ENSPANG00000035074	-	99	83.735	Papio_anubis
ENSHCOG00000019338	ddx23	93	88.874	ENSPANG00000019459	DDX23	77	91.935	Papio_anubis
ENSHCOG00000019338	ddx23	100	85.244	ENSPKIG00000024110	ddx23	100	86.935	Paramormyrops_kingsleyae
ENSHCOG00000019338	ddx23	100	74.069	ENSPSIG00000002834	DDX23	100	70.839	Pelodiscus_sinensis
ENSHCOG00000019338	ddx23	100	87.871	ENSPMGG00000010243	ddx23	100	86.158	Periophthalmus_magnuspinnatus
ENSHCOG00000019338	ddx23	93	88.740	ENSPEMG00000011305	Ddx23	83	92.082	Peromyscus_maniculatus_bairdii
ENSHCOG00000019338	ddx23	87	85.628	ENSPMAG00000008625	ddx23	94	84.233	Petromyzon_marinus
ENSHCOG00000019338	ddx23	90	89.684	ENSPCIG00000027691	DDX23	83	92.229	Phascolarctos_cinereus
ENSHCOG00000019338	ddx23	100	92.336	ENSPFOG00000012159	ddx23	100	91.347	Poecilia_formosa
ENSHCOG00000019338	ddx23	100	92.556	ENSPLAG00000005052	ddx23	100	91.439	Poecilia_latipinna
ENSHCOG00000019338	ddx23	100	92.556	ENSPMEG00000015385	ddx23	100	91.439	Poecilia_mexicana
ENSHCOG00000019338	ddx23	100	92.308	ENSPREG00000007074	ddx23	100	92.680	Poecilia_reticulata
ENSHCOG00000019338	ddx23	93	88.874	ENSPPYG00000004468	DDX23	80	91.935	Pongo_abelii
ENSHCOG00000019338	ddx23	87	92.121	ENSPCAG00000002016	DDX23	83	92.229	Procavia_capensis
ENSHCOG00000019338	ddx23	93	88.874	ENSPCOG00000025915	DDX23	100	93.750	Propithecus_coquereli
ENSHCOG00000019338	ddx23	93	88.874	ENSPVAG00000009818	DDX23	83	91.935	Pteropus_vampyrus
ENSHCOG00000019338	ddx23	100	91.466	ENSPNYG00000021038	ddx23	100	91.466	Pundamilia_nyererei
ENSHCOG00000019338	ddx23	100	87.664	ENSPNAG00000019203	ddx23	99	87.533	Pygocentrus_nattereri
ENSHCOG00000019338	ddx23	92	88.560	ENSRNOG00000060154	Ddx23	83	92.082	Rattus_norvegicus
ENSHCOG00000019338	ddx23	100	70.528	ENSRBIG00000036337	-	88	78.886	Rhinopithecus_bieti
ENSHCOG00000019338	ddx23	93	75.570	ENSRBIG00000040362	DDX23	81	79.394	Rhinopithecus_bieti
ENSHCOG00000019338	ddx23	100	71.001	ENSRROG00000045747	-	89	78.886	Rhinopithecus_roxellana
ENSHCOG00000019338	ddx23	93	88.874	ENSRROG00000028964	DDX23	83	91.935	Rhinopithecus_roxellana
ENSHCOG00000019338	ddx23	77	36.181	YDR243C	-	81	38.476	Saccharomyces_cerevisiae
ENSHCOG00000019338	ddx23	93	89.008	ENSSBOG00000025799	DDX23	83	92.082	Saimiri_boliviensis_boliviensis
ENSHCOG00000019338	ddx23	90	89.684	ENSSHAG00000006590	DDX23	83	92.229	Sarcophilus_harrisii
ENSHCOG00000019338	ddx23	90	93.802	ENSSFOG00015013273	ddx23	100	89.963	Scleropages_formosus
ENSHCOG00000019338	ddx23	100	91.056	ENSSMAG00000000529	ddx23	100	90.186	Scophthalmus_maximus
ENSHCOG00000019338	ddx23	100	93.548	ENSSDUG00000022459	ddx23	100	93.797	Seriola_dumerili
ENSHCOG00000019338	ddx23	100	94.169	ENSSLDG00000010453	ddx23	100	93.672	Seriola_lalandi_dorsalis
ENSHCOG00000019338	ddx23	84	94.150	ENSSARG00000004534	DDX23	76	94.150	Sorex_araneus
ENSHCOG00000019338	ddx23	100	83.678	ENSSPUG00000016044	DDX23	83	91.935	Sphenodon_punctatus
ENSHCOG00000019338	ddx23	100	93.797	ENSSPAG00000016482	ddx23	100	94.045	Stegastes_partitus
ENSHCOG00000019338	ddx23	100	84.262	ENSSSCG00000000176	DDX23	83	91.935	Sus_scrofa
ENSHCOG00000019338	ddx23	100	88.447	ENSTRUG00000000455	ddx23	100	89.068	Takifugu_rubripes
ENSHCOG00000019338	ddx23	89	89.902	ENSTBEG00000016909	DDX23	83	91.935	Tupaia_belangeri
ENSHCOG00000019338	ddx23	93	82.038	ENSTTRG00000004604	DDX23	83	84.897	Tursiops_truncatus
ENSHCOG00000019338	ddx23	100	84.140	ENSUAMG00000027082	DDX23	83	91.935	Ursus_americanus
ENSHCOG00000019338	ddx23	100	84.140	ENSUMAG00000006538	DDX23	83	91.935	Ursus_maritimus
ENSHCOG00000019338	ddx23	93	88.740	ENSVVUG00000019648	DDX23	83	91.935	Vulpes_vulpes
ENSHCOG00000019338	ddx23	87	87.595	ENSXETG00000009807	ddx23	84	87.683	Xenopus_tropicalis
ENSHCOG00000019338	ddx23	100	89.068	ENSXCOG00000011648	ddx23	100	87.547	Xiphophorus_couchianus
ENSHCOG00000019338	ddx23	100	92.804	ENSXMAG00000017387	ddx23	100	92.928	Xiphophorus_maculatus