EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000019512 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 89765 bases
Position: chrKV880248.1:5409854-5499618
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	1	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	2	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	3	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	4	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	5	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	6	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	7	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	8	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	9	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	10	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	11	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	12	13
ENSHCOP00000027588	zf-C2H2	PF00096.26	1.2e-71	13	13
ENSHCOP00000027588	zf-met	PF12874.7	4e-20	1	2
ENSHCOP00000027588	zf-met	PF12874.7	4e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023851	-	1326	-	ENSHCOP00000027588	441 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000019512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019512's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000019512	-	91	55.814	ENSHCOG00000001629	-	84	52.465
ENSHCOG00000019512	-	90	49.770	ENSHCOG00000017437	-	72	56.024
ENSHCOG00000019512	-	89	36.970	ENSHCOG00000017644	patz1	56	33.526
ENSHCOG00000019512	-	90	43.137	ENSHCOG00000012131	prdm5	70	43.137
ENSHCOG00000019512	-	94	52.195	ENSHCOG00000015010	-	81	52.195
ENSHCOG00000019512	-	95	61.589	ENSHCOG00000002969	-	83	61.589
ENSHCOG00000019512	-	88	36.620	ENSHCOG00000020556	-	65	35.915
ENSHCOG00000019512	-	92	55.195	ENSHCOG00000008742	-	82	55.195
ENSHCOG00000019512	-	99	61.881	ENSHCOG00000003085	-	90	61.881
ENSHCOG00000019512	-	90	56.028	ENSHCOG00000019481	-	70	56.818
ENSHCOG00000019512	-	92	60.800	ENSHCOG00000008906	-	80	60.800
ENSHCOG00000019512	-	87	30.047	ENSHCOG00000016337	si:ch211-216l23.1	95	31.677
ENSHCOG00000019512	-	99	54.054	ENSHCOG00000008133	-	70	53.604
ENSHCOG00000019512	-	93	61.071	ENSHCOG00000012662	-	87	60.915
ENSHCOG00000019512	-	90	55.696	ENSHCOG00000020670	-	98	55.696
ENSHCOG00000019512	-	96	64.602	ENSHCOG00000011433	-	94	64.602
ENSHCOG00000019512	-	98	51.163	ENSHCOG00000008205	-	83	51.163
ENSHCOG00000019512	-	92	53.107	ENSHCOG00000014786	-	98	53.107
ENSHCOG00000019512	-	94	57.055	ENSHCOG00000014781	-	83	57.055
ENSHCOG00000019512	-	92	56.757	ENSHCOG00000012617	-	84	56.757
ENSHCOG00000019512	-	89	60.638	ENSHCOG00000001300	-	75	60.638
ENSHCOG00000019512	-	95	55.512	ENSHCOG00000015000	-	92	55.118
ENSHCOG00000019512	-	90	57.143	ENSHCOG00000015005	-	73	56.400
ENSHCOG00000019512	-	99	50.206	ENSHCOG00000014881	-	75	50.206
ENSHCOG00000019512	-	100	35.106	ENSHCOG00000014887	-	80	33.891
ENSHCOG00000019512	-	90	44.528	ENSHCOG00000008181	-	72	43.321
ENSHCOG00000019512	-	96	59.283	ENSHCOG00000015425	-	89	56.400
ENSHCOG00000019512	-	95	58.084	ENSHCOG00000008028	-	86	58.084
ENSHCOG00000019512	-	96	53.968	ENSHCOG00000001272	-	96	57.597
ENSHCOG00000019512	-	96	56.705	ENSHCOG00000007681	-	95	56.705
ENSHCOG00000019512	-	95	44.118	ENSHCOG00000010282	znf236	80	44.118
ENSHCOG00000019512	-	93	41.576	ENSHCOG00000006286	ZNF319	87	41.576
ENSHCOG00000019512	-	98	62.692	ENSHCOG00000020879	-	88	61.497
ENSHCOG00000019512	-	91	56.477	ENSHCOG00000018977	-	69	56.477
ENSHCOG00000019512	-	99	59.328	ENSHCOG00000015386	-	95	59.328
ENSHCOG00000019512	-	93	53.788	ENSHCOG00000014850	-	69	53.788
ENSHCOG00000019512	-	89	61.572	ENSHCOG00000001793	-	71	60.776
ENSHCOG00000019512	-	96	33.195	ENSHCOG00000011612	zfat	65	33.195
ENSHCOG00000019512	-	96	68.132	ENSHCOG00000015497	-	87	68.132
ENSHCOG00000019512	-	96	65.844	ENSHCOG00000015355	-	95	64.655
ENSHCOG00000019512	-	97	62.011	ENSHCOG00000000627	-	53	62.011
ENSHCOG00000019512	-	99	52.827	ENSHCOG00000019497	-	93	51.852
ENSHCOG00000019512	-	89	62.874	ENSHCOG00000020725	-	70	60.843
ENSHCOG00000019512	-	96	59.278	ENSHCOG00000001942	-	94	56.265
ENSHCOG00000019512	-	93	51.385	ENSHCOG00000001252	-	97	54.293
ENSHCOG00000019512	-	96	62.500	ENSHCOG00000009009	-	99	62.500
ENSHCOG00000019512	-	98	64.885	ENSHCOG00000020993	-	87	64.885
ENSHCOG00000019512	-	96	42.963	ENSHCOG00000016455	e4f1	62	42.963
ENSHCOG00000019512	-	98	53.016	ENSHCOG00000020848	-	82	52.941
ENSHCOG00000019512	-	97	55.159	ENSHCOG00000014986	-	80	55.159
ENSHCOG00000019512	-	91	56.897	ENSHCOG00000014797	-	59	56.897
ENSHCOG00000019512	-	97	53.608	ENSHCOG00000014796	-	83	53.608
ENSHCOG00000019512	-	95	59.361	ENSHCOG00000007358	-	88	59.361
ENSHCOG00000019512	-	97	50.181	ENSHCOG00000007351	-	94	49.711
ENSHCOG00000019512	-	98	58.120	ENSHCOG00000015484	-	89	58.120
ENSHCOG00000019512	-	94	55.556	ENSHCOG00000001318	-	99	50.413
ENSHCOG00000019512	-	92	42.361	ENSHCOG00000001313	-	50	45.000
ENSHCOG00000019512	-	91	62.567	ENSHCOG00000001423	-	54	62.567
ENSHCOG00000019512	-	88	58.291	ENSHCOG00000012592	-	77	58.278
ENSHCOG00000019512	-	97	58.084	ENSHCOG00000020924	-	80	58.084
ENSHCOG00000019512	-	93	60.000	ENSHCOG00000021033	-	70	60.000
ENSHCOG00000019512	-	84	50.870	ENSHCOG00000015438	-	60	48.661
ENSHCOG00000019512	-	89	45.963	ENSHCOG00000008590	gfi1ab	55	45.963
ENSHCOG00000019512	-	98	53.488	ENSHCOG00000020846	-	81	59.641
ENSHCOG00000019512	-	92	41.979	ENSHCOG00000015231	-	63	42.308
ENSHCOG00000019512	-	97	55.906	ENSHCOG00000001242	-	84	55.769
ENSHCOG00000019512	-	99	36.176	ENSHCOG00000015237	-	72	36.176
ENSHCOG00000019512	-	91	53.596	ENSHCOG00000019438	-	89	58.561
ENSHCOG00000019512	-	88	42.718	ENSHCOG00000019435	SNAI2	55	42.718
ENSHCOG00000019512	-	98	61.658	ENSHCOG00000015463	-	84	61.658
ENSHCOG00000019512	-	90	59.862	ENSHCOG00000001448	-	71	58.721
ENSHCOG00000019512	-	95	57.034	ENSHCOG00000001238	-	99	57.034
ENSHCOG00000019512	-	90	36.559	ENSHCOG00000008686	-	90	35.938
ENSHCOG00000019512	-	92	41.912	ENSHCOG00000000800	-	78	37.069
ENSHCOG00000019512	-	90	42.105	ENSHCOG00000008116	scrt2	53	42.105
ENSHCOG00000019512	-	96	52.174	ENSHCOG00000007464	-	59	52.174
ENSHCOG00000019512	-	93	56.627	ENSHCOG00000011411	-	84	56.931
ENSHCOG00000019512	-	97	64.388	ENSHCOG00000019385	-	70	48.622
ENSHCOG00000019512	-	88	58.036	ENSHCOG00000014999	-	50	58.036
ENSHCOG00000019512	-	98	55.801	ENSHCOG00000013489	-	99	54.936
ENSHCOG00000019512	-	97	41.061	ENSHCOG00000015246	-	60	41.667
ENSHCOG00000019512	-	90	64.151	ENSHCOG00000004745	sall3b	61	64.151
ENSHCOG00000019512	-	98	46.584	ENSHCOG00000019555	GFI1	56	46.584
ENSHCOG00000019512	-	88	61.324	ENSHCOG00000021028	-	97	52.941
ENSHCOG00000019512	-	96	54.857	ENSHCOG00000019458	-	76	54.857
ENSHCOG00000019512	-	97	61.176	ENSHCOG00000019454	-	52	61.176
ENSHCOG00000019512	-	97	54.808	ENSHCOG00000008168	-	97	55.556
ENSHCOG00000019512	-	94	40.845	ENSHCOG00000001901	si:dkey-89b17.4	98	40.845
ENSHCOG00000019512	-	98	49.569	ENSHCOG00000001256	-	88	49.569
ENSHCOG00000019512	-	96	56.364	ENSHCOG00000000947	-	81	55.455
ENSHCOG00000019512	-	98	59.143	ENSHCOG00000020856	-	81	60.417
ENSHCOG00000019512	-	97	36.028	ENSHCOG00000015241	-	69	36.446
ENSHCOG00000019512	-	93	49.471	ENSHCOG00000021073	-	91	54.217
ENSHCOG00000019512	-	91	62.745	ENSHCOG00000015476	-	99	61.356
ENSHCOG00000019512	-	98	44.578	ENSHCOG00000010332	-	71	44.311
ENSHCOG00000019512	-	95	59.043	ENSHCOG00000007990	-	87	57.492
ENSHCOG00000019512	-	96	56.863	ENSHCOG00000014777	-	95	51.822
ENSHCOG00000019512	-	98	41.473	ENSHCOG00000004326	GZF1	51	39.236
ENSHCOG00000019512	-	91	39.927	ENSHCOG00000018201	-	92	35.028
ENSHCOG00000019512	-	90	55.856	ENSHCOG00000009103	-	52	55.856
ENSHCOG00000019512	-	99	57.028	ENSHCOG00000001338	-	99	53.046
ENSHCOG00000019512	-	96	30.688	ENSHCOG00000002898	-	60	30.597
ENSHCOG00000019512	-	99	55.111	ENSHCOG00000019541	-	86	55.111
ENSHCOG00000019512	-	98	58.307	ENSHCOG00000020940	-	78	59.574
ENSHCOG00000019512	-	98	61.137	ENSHCOG00000015414	-	90	61.137
ENSHCOG00000019512	-	96	53.125	ENSHCOG00000001245	-	87	53.125
ENSHCOG00000019512	-	90	42.500	ENSHCOG00000008227	-	60	40.299
ENSHCOG00000019512	-	92	57.068	ENSHCOG00000001292	-	89	54.974
ENSHCOG00000019512	-	93	58.857	ENSHCOG00000012175	-	89	58.857
ENSHCOG00000019512	-	92	51.613	ENSHCOG00000003041	-	92	47.710
ENSHCOG00000019512	-	96	61.965	ENSHCOG00000015441	-	78	61.965
ENSHCOG00000019512	-	98	55.977	ENSHCOG00000014713	-	99	55.231
ENSHCOG00000019512	-	96	52.632	ENSHCOG00000011432	-	91	51.004
ENSHCOG00000019512	-	98	57.386	ENSHCOG00000019388	-	68	57.386
ENSHCOG00000019512	-	96	58.706	ENSHCOG00000008550	-	83	56.931
ENSHCOG00000019512	-	95	61.836	ENSHCOG00000001631	-	81	56.731
ENSHCOG00000019512	-	93	40.000	ENSHCOG00000000511	-	72	40.000
ENSHCOG00000019512	-	96	55.238	ENSHCOG00000000517	-	88	52.405
ENSHCOG00000019512	-	96	58.706	ENSHCOG00000001873	-	83	56.931
ENSHCOG00000019512	-	97	58.140	ENSHCOG00000001870	-	77	58.140
ENSHCOG00000019512	-	89	37.647	ENSHCOG00000001875	zbtb41	55	35.616
ENSHCOG00000019512	-	96	63.402	ENSHCOG00000007664	-	98	60.000
ENSHCOG00000019512	-	92	39.516	ENSHCOG00000015639	znf319b	98	39.516
ENSHCOG00000019512	-	87	52.532	ENSHCOG00000014874	-	77	51.479
ENSHCOG00000019512	-	99	55.337	ENSHCOG00000007485	-	95	55.882
ENSHCOG00000019512	-	98	55.491	ENSHCOG00000001883	-	89	56.923
ENSHCOG00000019512	-	96	61.246	ENSHCOG00000001308	-	83	58.000
ENSHCOG00000019512	-	97	54.167	ENSHCOG00000014792	-	79	50.595
ENSHCOG00000019512	-	91	54.039	ENSHCOG00000001345	-	79	54.039
ENSHCOG00000019512	-	90	40.206	ENSHCOG00000016704	scrt1b	56	40.206
ENSHCOG00000019512	-	96	60.123	ENSHCOG00000020976	-	73	60.123
ENSHCOG00000019512	-	99	60.290	ENSHCOG00000020972	-	99	59.804
ENSHCOG00000019512	-	89	59.483	ENSHCOG00000017456	-	89	59.483
ENSHCOG00000019512	-	92	60.211	ENSHCOG00000000138	-	64	60.211
ENSHCOG00000019512	-	92	33.019	ENSHCOG00000004879	znf341	55	30.825
ENSHCOG00000019512	-	88	40.964	ENSHCOG00000016179	-	50	40.964
ENSHCOG00000019512	-	94	58.716	ENSHCOG00000015003	-	71	58.716
ENSHCOG00000019512	-	96	55.513	ENSHCOG00000013455	-	96	55.513
ENSHCOG00000019512	-	98	47.748	ENSHCOG00000008234	-	80	46.372
ENSHCOG00000019512	-	89	63.351	ENSHCOG00000003021	-	62	61.957
ENSHCOG00000019512	-	95	60.533	ENSHCOG00000001638	-	79	57.426
ENSHCOG00000019512	-	92	57.664	ENSHCOG00000008601	-	82	57.664
ENSHCOG00000019512	-	92	57.862	ENSHCOG00000020984	-	78	55.482
ENSHCOG00000019512	-	88	45.912	ENSHCOG00000013713	gfi1b	53	45.912
ENSHCOG00000019512	-	98	54.006	ENSHCOG00000020909	-	93	46.925
ENSHCOG00000019512	-	92	30.275	ENSHCOG00000014890	znf646	99	30.000
ENSHCOG00000019512	-	96	62.376	ENSHCOG00000019465	-	90	62.376
ENSHCOG00000019512	-	98	58.036	ENSHCOG00000015459	-	79	58.036
ENSHCOG00000019512	-	85	57.303	ENSHCOG00000019006	-	65	55.618
ENSHCOG00000019512	-	90	53.881	ENSHCOG00000019001	-	93	49.398
ENSHCOG00000019512	-	95	59.274	ENSHCOG00000015105	-	97	56.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019512	-	98	52.113	ENSAMXG00000029783	-	97	52.113	Astyanax_mexicanus
ENSHCOG00000019512	-	94	54.103	ENSAMXG00000000353	-	95	54.103	Astyanax_mexicanus
ENSHCOG00000019512	-	92	51.757	ENSAMXG00000044028	-	98	51.757	Astyanax_mexicanus
ENSHCOG00000019512	-	91	49.180	ENSAMXG00000043019	-	91	49.180	Astyanax_mexicanus
ENSHCOG00000019512	-	92	50.000	ENSAMXG00000034096	-	90	50.000	Astyanax_mexicanus
ENSHCOG00000019512	-	95	46.518	ENSBTAG00000014593	-	78	46.518	Bos_taurus
ENSHCOG00000019512	-	90	49.225	ENSBTAG00000040358	-	100	49.225	Bos_taurus
ENSHCOG00000019512	-	92	45.665	ENSCSAG00000000471	-	98	45.665	Chlorocebus_sabaeus
ENSHCOG00000019512	-	90	41.463	ENSCPBG00000009609	-	85	41.463	Chrysemys_picta_bellii
ENSHCOG00000019512	-	91	49.840	ENSCPBG00000002430	-	76	48.366	Chrysemys_picta_bellii
ENSHCOG00000019512	-	96	48.344	ENSDNOG00000042588	-	88	48.344	Dasypus_novemcinctus
ENSHCOG00000019512	-	92	33.981	ENSDNOG00000047529	-	70	32.869	Dasypus_novemcinctus
ENSHCOG00000019512	-	98	48.996	ENSEBUG00000013221	-	93	48.996	Eptatretus_burgeri
ENSHCOG00000019512	-	89	44.311	ENSEBUG00000016164	-	68	43.557	Eptatretus_burgeri
ENSHCOG00000019512	-	90	43.617	ENSEBUG00000016969	-	78	43.617	Eptatretus_burgeri
ENSHCOG00000019512	-	93	46.460	ENSELUG00000019008	-	86	45.730	Esox_lucius
ENSHCOG00000019512	-	90	45.804	ENSFCAG00000043966	-	99	46.125	Felis_catus
ENSHCOG00000019512	-	90	50.179	ENSGAFG00000013048	-	68	50.179	Gambusia_affinis
ENSHCOG00000019512	-	98	53.846	ENSGAFG00000021131	-	88	53.846	Gambusia_affinis
ENSHCOG00000019512	-	92	45.380	ENSGGOG00000042802	-	99	45.380	Gorilla_gorilla
ENSHCOG00000019512	-	92	44.693	ENSMFAG00000008648	-	98	44.693	Macaca_fascicularis
ENSHCOG00000019512	-	92	44.693	ENSMNEG00000001556	-	98	44.693	Macaca_nemestrina
ENSHCOG00000019512	-	92	44.413	ENSMLEG00000007035	-	98	44.413	Mandrillus_leucophaeus
ENSHCOG00000019512	-	92	43.062	ENSMAUG00000015263	-	66	43.501	Mesocricetus_auratus
ENSHCOG00000019512	-	91	42.547	ENSMOCG00000003394	-	62	44.764	Microtus_ochrogaster
ENSHCOG00000019512	-	92	52.601	ENSMODG00000028916	-	70	52.601	Monodelphis_domestica
ENSHCOG00000019512	-	89	43.060	ENSMPUG00000006562	-	58	43.060	Mustela_putorius_furo
ENSHCOG00000019512	-	90	50.847	ENSNBRG00000010194	-	67	50.847	Neolamprologus_brichardi
ENSHCOG00000019512	-	92	46.821	ENSNLEG00000018988	-	99	46.821	Nomascus_leucogenys
ENSHCOG00000019512	-	92	48.551	ENSMEUG00000006978	-	81	48.551	Notamacropus_eugenii
ENSHCOG00000019512	-	91	51.744	ENSMEUG00000012153	-	63	51.744	Notamacropus_eugenii
ENSHCOG00000019512	-	83	38.671	ENSOGAG00000024538	-	59	38.671	Otolemur_garnettii
ENSHCOG00000019512	-	92	45.652	ENSPPAG00000014496	-	99	45.652	Pan_paniscus
ENSHCOG00000019512	-	92	44.693	ENSPANG00000030207	-	98	44.693	Papio_anubis
ENSHCOG00000019512	-	92	58.583	ENSPSIG00000010405	-	99	58.583	Pelodiscus_sinensis
ENSHCOG00000019512	-	92	43.492	ENSPSIG00000009650	-	76	43.492	Pelodiscus_sinensis
ENSHCOG00000019512	-	92	44.027	ENSPEMG00000010242	-	68	44.757	Peromyscus_maniculatus_bairdii
ENSHCOG00000019512	-	93	51.748	ENSPLAG00000020710	-	69	51.748	Poecilia_latipinna
ENSHCOG00000019512	-	96	51.163	ENSPLAG00000021062	-	90	51.163	Poecilia_latipinna
ENSHCOG00000019512	-	98	45.646	ENSPLAG00000010389	-	82	43.590	Poecilia_latipinna
ENSHCOG00000019512	-	90	46.726	ENSPCAG00000009106	-	78	46.726	Procavia_capensis
ENSHCOG00000019512	-	97	38.272	ENSPNYG00000024243	-	93	38.272	Pundamilia_nyererei
ENSHCOG00000019512	-	90	50.862	ENSPNAG00000018644	-	97	50.862	Pygocentrus_nattereri
ENSHCOG00000019512	-	92	40.822	ENSSHAG00000001415	-	91	40.214	Sarcophilus_harrisii
ENSHCOG00000019512	-	96	48.684	ENSSDUG00000009534	-	76	48.684	Seriola_dumerili
ENSHCOG00000019512	-	97	45.110	ENSSLDG00000013760	-	95	44.033	Seriola_lalandi_dorsalis
ENSHCOG00000019512	-	94	46.944	ENSSPUG00000007147	-	98	46.944	Sphenodon_punctatus
ENSHCOG00000019512	-	98	43.034	ENSTRUG00000006896	-	96	43.791	Takifugu_rubripes
ENSHCOG00000019512	-	95	43.085	ENSVPAG00000011867	-	89	44.000	Vicugna_pacos
ENSHCOG00000019512	-	96	46.926	ENSXCOG00000009794	-	85	46.926	Xiphophorus_couchianus