EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000019519 (Gene tree)
Gene ID: 109512703
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 11439 bases
Position: chrKV879831.1:267540-278978
Accession: 109512703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015764	NUC173	PF08161.12	6.6e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023815	-	3780	XM_019864637	ENSHCOP00000015764	1259 (aa)	XP_019720196	-

Gene Model

Click here to download ENSHCOG00000019519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019519	rrp12	97	74.342	ENSG00000052749	RRP12	100	76.562	Homo_sapiens
ENSHCOG00000019519	rrp12	99	81.328	ENSAPOG00000013355	rrp12	100	81.008	Acanthochromis_polyacanthus
ENSHCOG00000019519	rrp12	99	61.432	ENSAMEG00000000134	RRP12	99	61.586	Ailuropoda_melanoleuca
ENSHCOG00000019519	rrp12	99	82.565	ENSACIG00000022673	rrp12	100	82.467	Amphilophus_citrinellus
ENSHCOG00000019519	rrp12	99	82.422	ENSAOCG00000016149	rrp12	100	82.093	Amphiprion_ocellaris
ENSHCOG00000019519	rrp12	99	80.670	ENSAPEG00000016023	rrp12	100	80.356	Amphiprion_percula
ENSHCOG00000019519	rrp12	99	82.670	ENSATEG00000022627	rrp12	100	82.494	Anabas_testudineus
ENSHCOG00000019519	rrp12	96	58.227	ENSAPLG00000014387	RRP12	99	58.546	Anas_platyrhynchos
ENSHCOG00000019519	rrp12	99	58.256	ENSACAG00000002175	RRP12	99	57.915	Anolis_carolinensis
ENSHCOG00000019519	rrp12	97	75.000	ENSANAG00000037485	RRP12	99	75.000	Aotus_nancymaae
ENSHCOG00000019519	rrp12	99	82.075	ENSACLG00000007354	rrp12	100	82.165	Astatotilapia_calliptera
ENSHCOG00000019519	rrp12	100	72.227	ENSAMXG00000012852	rrp12	100	72.127	Astyanax_mexicanus
ENSHCOG00000019519	rrp12	97	74.675	ENSBTAG00000002191	RRP12	99	74.675	Bos_taurus
ENSHCOG00000019519	rrp12	85	59.128	ENSCJAG00000016549	-	99	59.128	Callithrix_jacchus
ENSHCOG00000019519	rrp12	99	61.846	ENSCAFG00000009043	RRP12	99	61.846	Canis_familiaris
ENSHCOG00000019519	rrp12	99	61.846	ENSCAFG00020005991	RRP12	99	61.846	Canis_lupus_dingo
ENSHCOG00000019519	rrp12	99	60.276	ENSCHIG00000011876	RRP12	99	60.429	Capra_hircus
ENSHCOG00000019519	rrp12	52	54.257	ENSTSYG00000030210	-	99	54.913	Carlito_syrichta
ENSHCOG00000019519	rrp12	96	57.339	ENSCAPG00000008991	RRP12	98	57.339	Cavia_aperea
ENSHCOG00000019519	rrp12	100	61.842	ENSCPOG00000004215	RRP12	100	61.842	Cavia_porcellus
ENSHCOG00000019519	rrp12	80	64.611	ENSCCAG00000024088	RRP12	99	67.176	Cebus_capucinus
ENSHCOG00000019519	rrp12	69	55.873	ENSCCAG00000033123	-	83	55.873	Cebus_capucinus
ENSHCOG00000019519	rrp12	99	58.082	ENSCATG00000045310	RRP12	99	58.237	Cercocebus_atys
ENSHCOG00000019519	rrp12	100	61.176	ENSCLAG00000003753	RRP12	100	61.253	Chinchilla_lanigera
ENSHCOG00000019519	rrp12	88	59.773	ENSCSAG00000005877	RRP12	99	59.773	Chlorocebus_sabaeus
ENSHCOG00000019519	rrp12	58	70.100	ENSCHOG00000003095	-	58	69.717	Choloepus_hoffmanni
ENSHCOG00000019519	rrp12	94	63.149	ENSCPBG00000011935	RRP12	97	63.149	Chrysemys_picta_bellii
ENSHCOG00000019519	rrp12	63	40.534	ENSCSAVG00000006059	-	99	39.976	Ciona_savignyi
ENSHCOG00000019519	rrp12	97	74.342	ENSCANG00000031653	RRP12	99	75.000	Colobus_angolensis_palliatus
ENSHCOG00000019519	rrp12	90	61.860	ENSCGRG00001004338	Rrp12	99	61.795	Cricetulus_griseus_chok1gshd
ENSHCOG00000019519	rrp12	99	61.467	ENSCGRG00000011965	Rrp12	99	61.408	Cricetulus_griseus_crigri
ENSHCOG00000019519	rrp12	99	79.286	ENSCSEG00000007799	rrp12	99	79.441	Cynoglossus_semilaevis
ENSHCOG00000019519	rrp12	99	80.610	ENSCVAG00000003418	rrp12	100	80.528	Cyprinodon_variegatus
ENSHCOG00000019519	rrp12	100	70.186	ENSDARG00000022410	rrp12	100	70.419	Danio_rerio
ENSHCOG00000019519	rrp12	100	61.769	ENSDNOG00000005120	RRP12	100	61.971	Dasypus_novemcinctus
ENSHCOG00000019519	rrp12	99	61.728	ENSDORG00000009199	Rrp12	99	62.096	Dipodomys_ordii
ENSHCOG00000019519	rrp12	91	68.116	ENSETEG00000002455	RRP12	92	68.116	Echinops_telfairi
ENSHCOG00000019519	rrp12	85	67.797	ENSEBUG00000006555	rrp12	99	67.797	Eptatretus_burgeri
ENSHCOG00000019519	rrp12	99	61.574	ENSEASG00005008693	RRP12	99	61.651	Equus_asinus_asinus
ENSHCOG00000019519	rrp12	94	61.248	ENSECAG00000010892	RRP12	99	61.330	Equus_caballus
ENSHCOG00000019519	rrp12	63	57.647	ENSEEUG00000005447	-	65	57.647	Erinaceus_europaeus
ENSHCOG00000019519	rrp12	99	75.039	ENSELUG00000010510	rrp12	100	74.576	Esox_lucius
ENSHCOG00000019519	rrp12	97	75.658	ENSFCAG00000028639	RRP12	99	75.658	Felis_catus
ENSHCOG00000019519	rrp12	94	61.304	ENSFALG00000008458	RRP12	99	61.107	Ficedula_albicollis
ENSHCOG00000019519	rrp12	99	61.533	ENSFDAG00000019108	RRP12	95	61.687	Fukomys_damarensis
ENSHCOG00000019519	rrp12	99	72.670	ENSFHEG00000004148	rrp12	100	72.650	Fundulus_heteroclitus
ENSHCOG00000019519	rrp12	96	79.936	ENSGMOG00000004188	rrp12	95	79.936	Gadus_morhua
ENSHCOG00000019519	rrp12	99	61.694	ENSGALG00000041331	RRP12	96	62.618	Gallus_gallus
ENSHCOG00000019519	rrp12	99	79.844	ENSGAFG00000009038	rrp12	100	79.767	Gambusia_affinis
ENSHCOG00000019519	rrp12	99	79.922	ENSGACG00000007175	rrp12	100	79.845	Gasterosteus_aculeatus
ENSHCOG00000019519	rrp12	68	66.782	ENSGAGG00000019169	RRP12	96	66.862	Gopherus_agassizii
ENSHCOG00000019519	rrp12	97	74.342	ENSGGOG00000014850	RRP12	99	74.342	Gorilla_gorilla
ENSHCOG00000019519	rrp12	99	82.238	ENSHBUG00000023527	rrp12	100	82.326	Haplochromis_burtoni
ENSHCOG00000019519	rrp12	99	61.765	ENSHGLG00000016772	RRP12	99	61.765	Heterocephalus_glaber_female
ENSHCOG00000019519	rrp12	99	61.765	ENSHGLG00100015110	RRP12	99	61.765	Heterocephalus_glaber_male
ENSHCOG00000019519	rrp12	100	71.528	ENSIPUG00000000311	RRP12	100	71.839	Ictalurus_punctatus
ENSHCOG00000019519	rrp12	99	62.616	ENSSTOG00000006515	RRP12	99	62.539	Ictidomys_tridecemlineatus
ENSHCOG00000019519	rrp12	96	61.187	ENSJJAG00000000110	Rrp12	99	61.107	Jaculus_jaculus
ENSHCOG00000019519	rrp12	99	80.375	ENSKMAG00000020621	rrp12	100	80.378	Kryptolebias_marmoratus
ENSHCOG00000019519	rrp12	100	80.612	ENSLBEG00000015335	rrp12	100	80.769	Labrus_bergylta
ENSHCOG00000019519	rrp12	72	64.794	ENSLACG00000016633	RRP12	82	64.794	Latimeria_chalumnae
ENSHCOG00000019519	rrp12	100	66.949	ENSLOCG00000003846	rrp12	100	66.949	Lepisosteus_oculatus
ENSHCOG00000019519	rrp12	99	61.231	ENSLAFG00000015965	RRP12	99	61.538	Loxodonta_africana
ENSHCOG00000019519	rrp12	98	73.684	ENSMFAG00000041558	RRP12	99	74.342	Macaca_fascicularis
ENSHCOG00000019519	rrp12	98	73.684	ENSMMUG00000019634	RRP12	99	74.342	Macaca_mulatta
ENSHCOG00000019519	rrp12	98	73.684	ENSMNEG00000036759	RRP12	99	74.342	Macaca_nemestrina
ENSHCOG00000019519	rrp12	92	73.684	ENSMLEG00000041317	RRP12	99	58.533	Mandrillus_leucophaeus
ENSHCOG00000019519	rrp12	99	82.948	ENSMAMG00000002964	rrp12	100	82.846	Mastacembelus_armatus
ENSHCOG00000019519	rrp12	99	82.081	ENSMZEG00005003241	rrp12	100	82.171	Maylandia_zebra
ENSHCOG00000019519	rrp12	99	60.015	ENSMGAG00000009829	RRP12	99	60.092	Meleagris_gallopavo
ENSHCOG00000019519	rrp12	99	60.530	ENSMAUG00000020743	Rrp12	99	60.312	Mesocricetus_auratus
ENSHCOG00000019519	rrp12	97	76.471	ENSMICG00000007624	RRP12	99	76.471	Microcebus_murinus
ENSHCOG00000019519	rrp12	100	62.375	ENSMOCG00000006753	Rrp12	100	62.162	Microtus_ochrogaster
ENSHCOG00000019519	rrp12	100	80.409	ENSMMOG00000010708	rrp12	100	80.173	Mola_mola
ENSHCOG00000019519	rrp12	99	62.074	ENSMODG00000004315	RRP12	99	62.074	Monodelphis_domestica
ENSHCOG00000019519	rrp12	99	78.554	ENSMALG00000016560	rrp12	99	82.079	Monopterus_albus
ENSHCOG00000019519	rrp12	99	61.639	MGP_CAROLIEiJ_G0022957	Rrp12	99	61.639	Mus_caroli
ENSHCOG00000019519	rrp12	99	61.978	ENSMUSG00000035049	Rrp12	99	61.978	Mus_musculus
ENSHCOG00000019519	rrp12	100	62.085	MGP_PahariEiJ_G0014447	Rrp12	100	62.085	Mus_pahari
ENSHCOG00000019519	rrp12	99	62.287	MGP_SPRETEiJ_G0023878	Rrp12	99	62.210	Mus_spretus
ENSHCOG00000019519	rrp12	99	61.171	ENSMPUG00000017046	RRP12	99	61.479	Mustela_putorius_furo
ENSHCOG00000019519	rrp12	99	61.261	ENSMLUG00000017160	RRP12	99	61.491	Myotis_lucifugus
ENSHCOG00000019519	rrp12	99	62.133	ENSNGAG00000024144	Rrp12	99	62.133	Nannospalax_galili
ENSHCOG00000019519	rrp12	99	82.605	ENSNBRG00000009987	rrp12	100	82.848	Neolamprologus_brichardi
ENSHCOG00000019519	rrp12	97	74.342	ENSNLEG00000013762	RRP12	99	74.342	Nomascus_leucogenys
ENSHCOG00000019519	rrp12	100	57.154	ENSMEUG00000003185	RRP12	100	56.999	Notamacropus_eugenii
ENSHCOG00000019519	rrp12	94	65.391	ENSOPRG00000005001	RRP12	94	65.391	Ochotona_princeps
ENSHCOG00000019519	rrp12	100	61.341	ENSODEG00000016439	RRP12	100	61.496	Octodon_degus
ENSHCOG00000019519	rrp12	99	82.551	ENSONIG00000009528	rrp12	100	82.791	Oreochromis_niloticus
ENSHCOG00000019519	rrp12	100	58.159	ENSOANG00000006560	RRP12	100	58.159	Ornithorhynchus_anatinus
ENSHCOG00000019519	rrp12	99	61.253	ENSOCUG00000005662	RRP12	99	61.562	Oryctolagus_cuniculus
ENSHCOG00000019519	rrp12	99	80.219	ENSORLG00000008688	rrp12	99	81.287	Oryzias_latipes
ENSHCOG00000019519	rrp12	97	80.096	ENSORLG00020002355	rrp12	99	79.841	Oryzias_latipes_hni
ENSHCOG00000019519	rrp12	99	80.375	ENSORLG00015006709	rrp12	99	79.953	Oryzias_latipes_hsok
ENSHCOG00000019519	rrp12	97	80.319	ENSOMEG00000002609	rrp12	99	80.319	Oryzias_melastigma
ENSHCOG00000019519	rrp12	99	61.538	ENSOGAG00000001626	RRP12	99	61.615	Otolemur_garnettii
ENSHCOG00000019519	rrp12	99	60.923	ENSOARG00000009681	RRP12	99	60.739	Ovis_aries
ENSHCOG00000019519	rrp12	97	74.342	ENSPPAG00000043885	RRP12	99	74.342	Pan_paniscus
ENSHCOG00000019519	rrp12	97	75.000	ENSPPRG00000002029	RRP12	99	75.000	Panthera_pardus
ENSHCOG00000019519	rrp12	97	75.658	ENSPTIG00000004428	RRP12	99	75.658	Panthera_tigris_altaica
ENSHCOG00000019519	rrp12	97	74.342	ENSPTRG00000002806	RRP12	99	74.342	Pan_troglodytes
ENSHCOG00000019519	rrp12	97	73.684	ENSPANG00000021360	RRP12	99	75.000	Papio_anubis
ENSHCOG00000019519	rrp12	100	70.998	ENSPKIG00000016516	rrp12	99	71.307	Paramormyrops_kingsleyae
ENSHCOG00000019519	rrp12	99	77.917	ENSPMGG00000020217	rrp12	100	77.855	Periophthalmus_magnuspinnatus
ENSHCOG00000019519	rrp12	100	62.654	ENSPEMG00000008437	Rrp12	99	62.654	Peromyscus_maniculatus_bairdii
ENSHCOG00000019519	rrp12	82	54.958	ENSPMAG00000007493	rrp12	83	54.958	Petromyzon_marinus
ENSHCOG00000019519	rrp12	96	72.819	ENSPCIG00000002157	RRP12	96	72.819	Phascolarctos_cinereus
ENSHCOG00000019519	rrp12	99	80.016	ENSPFOG00000014975	rrp12	100	79.938	Poecilia_formosa
ENSHCOG00000019519	rrp12	99	79.938	ENSPLAG00000009840	rrp12	100	79.861	Poecilia_latipinna
ENSHCOG00000019519	rrp12	99	80.172	ENSPMEG00000021871	rrp12	100	80.093	Poecilia_mexicana
ENSHCOG00000019519	rrp12	99	78.689	ENSPREG00000020950	rrp12	100	78.621	Poecilia_reticulata
ENSHCOG00000019519	rrp12	99	60.786	ENSPPYG00000002528	RRP12	99	60.786	Pongo_abelii
ENSHCOG00000019519	rrp12	94	76.836	ENSPCAG00000008967	RRP12	94	76.836	Procavia_capensis
ENSHCOG00000019519	rrp12	99	75.658	ENSPCOG00000014009	RRP12	99	75.658	Propithecus_coquereli
ENSHCOG00000019519	rrp12	99	59.830	ENSPVAG00000003370	RRP12	100	59.753	Pteropus_vampyrus
ENSHCOG00000019519	rrp12	99	82.469	ENSPNYG00000009451	rrp12	100	82.555	Pundamilia_nyererei
ENSHCOG00000019519	rrp12	100	71.928	ENSPNAG00000007658	rrp12	100	72.006	Pygocentrus_nattereri
ENSHCOG00000019519	rrp12	99	62.181	ENSRNOG00000048495	Rrp12	99	62.258	Rattus_norvegicus
ENSHCOG00000019519	rrp12	97	74.342	ENSRBIG00000021296	RRP12	99	75.000	Rhinopithecus_bieti
ENSHCOG00000019519	rrp12	97	74.342	ENSRROG00000032482	RRP12	99	75.000	Rhinopithecus_roxellana
ENSHCOG00000019519	rrp12	97	74.342	ENSSBOG00000030992	RRP12	99	74.342	Saimiri_boliviensis_boliviensis
ENSHCOG00000019519	rrp12	99	61.365	ENSSHAG00000018275	RRP12	99	61.365	Sarcophilus_harrisii
ENSHCOG00000019519	rrp12	99	72.551	ENSSFOG00015016400	rrp12	99	72.706	Scleropages_formosus
ENSHCOG00000019519	rrp12	99	80.766	ENSSMAG00000004047	rrp12	100	80.683	Scophthalmus_maximus
ENSHCOG00000019519	rrp12	99	83.894	ENSSDUG00000022871	rrp12	100	83.553	Seriola_dumerili
ENSHCOG00000019519	rrp12	99	83.659	ENSSLDG00000003038	rrp12	100	83.320	Seriola_lalandi_dorsalis
ENSHCOG00000019519	rrp12	100	59.568	ENSSPUG00000012221	RRP12	100	59.645	Sphenodon_punctatus
ENSHCOG00000019519	rrp12	99	83.863	ENSSPAG00000002261	rrp12	100	83.596	Stegastes_partitus
ENSHCOG00000019519	rrp12	100	61.343	ENSSSCG00000010514	RRP12	100	61.343	Sus_scrofa
ENSHCOG00000019519	rrp12	88	58.530	ENSTGUG00000009711	RRP12	100	58.494	Taeniopygia_guttata
ENSHCOG00000019519	rrp12	100	74.981	ENSTRUG00000012017	rrp12	100	74.825	Takifugu_rubripes
ENSHCOG00000019519	rrp12	100	79.054	ENSTNIG00000016522	rrp12	100	78.898	Tetraodon_nigroviridis
ENSHCOG00000019519	rrp12	78	74.510	ENSTBEG00000004907	RRP12	80	74.510	Tupaia_belangeri
ENSHCOG00000019519	rrp12	100	60.000	ENSTTRG00000009878	RRP12	100	60.077	Tursiops_truncatus
ENSHCOG00000019519	rrp12	99	62.122	ENSUAMG00000009092	RRP12	99	62.355	Ursus_americanus
ENSHCOG00000019519	rrp12	99	60.496	ENSUMAG00000021621	RRP12	99	60.728	Ursus_maritimus
ENSHCOG00000019519	rrp12	100	61.350	ENSVVUG00000023168	RRP12	99	61.801	Vulpes_vulpes
ENSHCOG00000019519	rrp12	99	63.488	ENSXETG00000003430	rrp12	99	63.622	Xenopus_tropicalis
ENSHCOG00000019519	rrp12	92	80.981	ENSXCOG00000012082	rrp12	99	78.029	Xiphophorus_couchianus
ENSHCOG00000019519	rrp12	99	80.414	ENSXMAG00000013498	rrp12	100	80.253	Xiphophorus_maculatus