EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000019527 (Gene tree)
Gene ID: 109514676
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6905 bases
Position: chrKV879882.1:25803-32707
Accession: 109514676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015818	Beta-Casp	PF10996.8	5.5e-21	1	1
ENSHCOP00000015818	Lactamase_B	PF00753.27	8.7e-07	1	1
ENSHCOP00000015818	RMMBL	PF07521.12	4.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000028219	-	2887	XM_019867959	ENSHCOP00000015818	801 (aa)	XP_019723518	-

Gene Model

Click here to download ENSHCOG00000019527's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019527	cpsf2	98	84.537	ENSG00000165934	CPSF2	100	90.000	Homo_sapiens
ENSHCOG00000019527	cpsf2	98	93.647	ENSAPOG00000001242	cpsf2	100	93.647	Acanthochromis_polyacanthus
ENSHCOG00000019527	cpsf2	98	93.020	ENSACIG00000009331	cpsf2	100	93.020	Amphilophus_citrinellus
ENSHCOG00000019527	cpsf2	98	93.901	ENSAOCG00000014095	cpsf2	100	93.901	Amphiprion_ocellaris
ENSHCOG00000019527	cpsf2	98	93.901	ENSAPEG00000009158	cpsf2	100	93.901	Amphiprion_percula
ENSHCOG00000019527	cpsf2	95	92.744	ENSATEG00000017644	cpsf2	99	91.611	Anabas_testudineus
ENSHCOG00000019527	cpsf2	98	84.810	ENSAPLG00000006330	CPSF2	100	84.810	Anas_platyrhynchos
ENSHCOG00000019527	cpsf2	98	84.537	ENSACAG00000009245	CPSF2	100	84.537	Anolis_carolinensis
ENSHCOG00000019527	cpsf2	98	84.791	ENSANAG00000022915	CPSF2	100	84.791	Aotus_nancymaae
ENSHCOG00000019527	cpsf2	98	88.213	ENSAMXG00000018696	cpsf2	100	88.213	Astyanax_mexicanus
ENSHCOG00000019527	cpsf2	98	84.664	ENSBTAG00000010227	CPSF2	100	84.664	Bos_taurus
ENSHCOG00000019527	cpsf2	98	41.831	WBGene00017313	cpsf-2	100	41.735	Caenorhabditis_elegans
ENSHCOG00000019527	cpsf2	98	84.791	ENSCJAG00000018069	CPSF2	100	84.791	Callithrix_jacchus
ENSHCOG00000019527	cpsf2	98	84.537	ENSCAFG00000010909	CPSF2	100	84.537	Canis_familiaris
ENSHCOG00000019527	cpsf2	98	84.537	ENSCAFG00020020670	CPSF2	100	84.537	Canis_lupus_dingo
ENSHCOG00000019527	cpsf2	98	84.664	ENSCHIG00000023848	CPSF2	100	84.664	Capra_hircus
ENSHCOG00000019527	cpsf2	98	84.791	ENSTSYG00000009036	CPSF2	100	84.791	Carlito_syrichta
ENSHCOG00000019527	cpsf2	98	84.664	ENSCPOG00000010899	CPSF2	100	84.664	Cavia_porcellus
ENSHCOG00000019527	cpsf2	98	84.791	ENSCCAG00000028088	CPSF2	100	84.791	Cebus_capucinus
ENSHCOG00000019527	cpsf2	98	84.664	ENSCATG00000030132	CPSF2	100	84.664	Cercocebus_atys
ENSHCOG00000019527	cpsf2	98	84.791	ENSCLAG00000012404	CPSF2	100	84.791	Chinchilla_lanigera
ENSHCOG00000019527	cpsf2	98	84.664	ENSCSAG00000011300	CPSF2	100	84.664	Chlorocebus_sabaeus
ENSHCOG00000019527	cpsf2	98	79.468	ENSCHOG00000012904	CPSF2	100	79.468	Choloepus_hoffmanni
ENSHCOG00000019527	cpsf2	99	84.703	ENSCPBG00000008766	CPSF2	98	84.703	Chrysemys_picta_bellii
ENSHCOG00000019527	cpsf2	98	53.589	ENSCING00000007881	-	100	52.723	Ciona_intestinalis
ENSHCOG00000019527	cpsf2	92	84.459	ENSCANG00000041651	CPSF2	100	84.438	Colobus_angolensis_palliatus
ENSHCOG00000019527	cpsf2	98	84.284	ENSCGRG00001006901	Cpsf2	100	84.284	Cricetulus_griseus_chok1gshd
ENSHCOG00000019527	cpsf2	98	84.284	ENSCGRG00000012416	Cpsf2	100	84.284	Cricetulus_griseus_crigri
ENSHCOG00000019527	cpsf2	98	92.132	ENSCSEG00000004116	cpsf2	100	92.132	Cynoglossus_semilaevis
ENSHCOG00000019527	cpsf2	98	93.139	ENSCVAG00000000095	cpsf2	100	93.139	Cyprinodon_variegatus
ENSHCOG00000019527	cpsf2	98	86.962	ENSDARG00000028971	cpsf2	100	86.962	Danio_rerio
ENSHCOG00000019527	cpsf2	98	84.791	ENSDNOG00000042757	CPSF2	100	84.791	Dasypus_novemcinctus
ENSHCOG00000019527	cpsf2	98	84.664	ENSDORG00000013709	Cpsf2	100	84.664	Dipodomys_ordii
ENSHCOG00000019527	cpsf2	98	52.351	FBgn0027873	Cpsf100	100	52.109	Drosophila_melanogaster
ENSHCOG00000019527	cpsf2	98	77.215	ENSETEG00000012123	CPSF2	100	77.215	Echinops_telfairi
ENSHCOG00000019527	cpsf2	51	75.795	ENSEBUG00000012098	cpsf2	93	75.795	Eptatretus_burgeri
ENSHCOG00000019527	cpsf2	87	90.102	ENSEASG00005021193	CPSF2	100	90.102	Equus_asinus_asinus
ENSHCOG00000019527	cpsf2	98	84.537	ENSECAG00000023935	CPSF2	100	84.537	Equus_caballus
ENSHCOG00000019527	cpsf2	98	87.970	ENSELUG00000008442	cpsf2	100	87.970	Esox_lucius
ENSHCOG00000019527	cpsf2	98	84.537	ENSFCAG00000007886	CPSF2	100	84.537	Felis_catus
ENSHCOG00000019527	cpsf2	98	85.025	ENSFALG00000002412	CPSF2	100	85.025	Ficedula_albicollis
ENSHCOG00000019527	cpsf2	98	84.537	ENSFDAG00000006327	CPSF2	100	84.537	Fukomys_damarensis
ENSHCOG00000019527	cpsf2	95	91.230	ENSFHEG00000015465	cpsf2	98	91.754	Fundulus_heteroclitus
ENSHCOG00000019527	cpsf2	98	88.636	ENSGMOG00000008761	cpsf2	100	88.636	Gadus_morhua
ENSHCOG00000019527	cpsf2	98	85.152	ENSGALG00000010783	CPSF2	100	85.152	Gallus_gallus
ENSHCOG00000019527	cpsf2	98	93.266	ENSGAFG00000001407	cpsf2	100	93.266	Gambusia_affinis
ENSHCOG00000019527	cpsf2	98	93.520	ENSGACG00000008418	cpsf2	100	93.520	Gasterosteus_aculeatus
ENSHCOG00000019527	cpsf2	98	84.791	ENSGAGG00000008287	CPSF2	100	84.791	Gopherus_agassizii
ENSHCOG00000019527	cpsf2	98	84.537	ENSGGOG00000011799	CPSF2	100	84.537	Gorilla_gorilla
ENSHCOG00000019527	cpsf2	98	92.630	ENSHBUG00000023466	cpsf2	100	92.630	Haplochromis_burtoni
ENSHCOG00000019527	cpsf2	98	84.664	ENSHGLG00000018311	CPSF2	100	84.664	Heterocephalus_glaber_female
ENSHCOG00000019527	cpsf2	98	84.664	ENSHGLG00100016460	CPSF2	100	84.664	Heterocephalus_glaber_male
ENSHCOG00000019527	cpsf2	98	88.720	ENSIPUG00000020857	cpsf2	100	88.720	Ictalurus_punctatus
ENSHCOG00000019527	cpsf2	98	84.791	ENSSTOG00000009528	CPSF2	100	84.791	Ictidomys_tridecemlineatus
ENSHCOG00000019527	cpsf2	98	84.411	ENSJJAG00000017925	Cpsf2	100	84.411	Jaculus_jaculus
ENSHCOG00000019527	cpsf2	98	93.520	ENSKMAG00000019429	cpsf2	100	93.520	Kryptolebias_marmoratus
ENSHCOG00000019527	cpsf2	93	92.359	ENSLBEG00000011585	cpsf2	100	92.359	Labrus_bergylta
ENSHCOG00000019527	cpsf2	98	83.122	ENSLACG00000019024	CPSF2	100	83.122	Latimeria_chalumnae
ENSHCOG00000019527	cpsf2	98	88.861	ENSLOCG00000014102	cpsf2	100	88.861	Lepisosteus_oculatus
ENSHCOG00000019527	cpsf2	98	84.324	ENSLAFG00000004891	CPSF2	100	84.324	Loxodonta_africana
ENSHCOG00000019527	cpsf2	98	84.664	ENSMFAG00000041212	CPSF2	100	84.664	Macaca_fascicularis
ENSHCOG00000019527	cpsf2	98	84.664	ENSMMUG00000000699	CPSF2	100	84.664	Macaca_mulatta
ENSHCOG00000019527	cpsf2	98	84.664	ENSMNEG00000031584	CPSF2	100	84.664	Macaca_nemestrina
ENSHCOG00000019527	cpsf2	98	84.664	ENSMLEG00000029394	CPSF2	100	84.664	Mandrillus_leucophaeus
ENSHCOG00000019527	cpsf2	98	94.028	ENSMAMG00000004235	cpsf2	100	94.028	Mastacembelus_armatus
ENSHCOG00000019527	cpsf2	98	92.503	ENSMZEG00005001769	cpsf2	100	92.503	Maylandia_zebra
ENSHCOG00000019527	cpsf2	98	84.918	ENSMGAG00000013122	CPSF2	100	84.918	Meleagris_gallopavo
ENSHCOG00000019527	cpsf2	98	84.284	ENSMAUG00000015160	Cpsf2	100	84.284	Mesocricetus_auratus
ENSHCOG00000019527	cpsf2	98	84.664	ENSMICG00000016441	CPSF2	100	84.664	Microcebus_murinus
ENSHCOG00000019527	cpsf2	98	84.284	ENSMOCG00000015372	Cpsf2	100	84.284	Microtus_ochrogaster
ENSHCOG00000019527	cpsf2	98	88.310	ENSMMOG00000015590	cpsf2	100	88.183	Mola_mola
ENSHCOG00000019527	cpsf2	98	85.171	ENSMODG00000002042	CPSF2	100	85.171	Monodelphis_domestica
ENSHCOG00000019527	cpsf2	98	90.089	ENSMALG00000022275	cpsf2	100	90.089	Monopterus_albus
ENSHCOG00000019527	cpsf2	98	84.664	ENSMUSG00000041781	Cpsf2	100	84.664	Mus_musculus
ENSHCOG00000019527	cpsf2	98	84.157	MGP_PahariEiJ_G0029791	Cpsf2	100	84.157	Mus_pahari
ENSHCOG00000019527	cpsf2	98	84.664	MGP_SPRETEiJ_G0018877	Cpsf2	100	84.664	Mus_spretus
ENSHCOG00000019527	cpsf2	98	84.537	ENSMPUG00000007617	CPSF2	98	84.537	Mustela_putorius_furo
ENSHCOG00000019527	cpsf2	98	84.411	ENSMLUG00000005570	CPSF2	100	84.411	Myotis_lucifugus
ENSHCOG00000019527	cpsf2	98	84.411	ENSNGAG00000020312	Cpsf2	100	84.411	Nannospalax_galili
ENSHCOG00000019527	cpsf2	98	92.757	ENSNBRG00000022402	cpsf2	100	92.757	Neolamprologus_brichardi
ENSHCOG00000019527	cpsf2	98	84.030	ENSNLEG00000017132	CPSF2	100	84.030	Nomascus_leucogenys
ENSHCOG00000019527	cpsf2	89	92.880	ENSMEUG00000008138	CPSF2	91	92.880	Notamacropus_eugenii
ENSHCOG00000019527	cpsf2	92	79.946	ENSOPRG00000008484	-	100	79.946	Ochotona_princeps
ENSHCOG00000019527	cpsf2	98	84.411	ENSODEG00000008682	CPSF2	100	84.411	Octodon_degus
ENSHCOG00000019527	cpsf2	98	92.884	ENSONIG00000005901	cpsf2	100	92.884	Oreochromis_niloticus
ENSHCOG00000019527	cpsf2	98	85.044	ENSOANG00000003822	CPSF2	100	85.044	Ornithorhynchus_anatinus
ENSHCOG00000019527	cpsf2	98	84.411	ENSOCUG00000005713	CPSF2	100	84.411	Oryctolagus_cuniculus
ENSHCOG00000019527	cpsf2	98	86.912	ENSORLG00000011628	cpsf2	100	86.912	Oryzias_latipes
ENSHCOG00000019527	cpsf2	98	92.503	ENSORLG00020016980	cpsf2	100	92.503	Oryzias_latipes_hni
ENSHCOG00000019527	cpsf2	98	92.503	ENSORLG00015011910	cpsf2	100	92.503	Oryzias_latipes_hsok
ENSHCOG00000019527	cpsf2	98	92.893	ENSOMEG00000022876	cpsf2	100	92.893	Oryzias_melastigma
ENSHCOG00000019527	cpsf2	98	81.669	ENSOARG00000012889	CPSF2	100	81.669	Ovis_aries
ENSHCOG00000019527	cpsf2	98	84.537	ENSPPAG00000039666	CPSF2	100	84.537	Pan_paniscus
ENSHCOG00000019527	cpsf2	98	84.518	ENSPPRG00000010869	CPSF2	100	84.518	Panthera_pardus
ENSHCOG00000019527	cpsf2	98	84.537	ENSPTIG00000021202	CPSF2	100	84.537	Panthera_tigris_altaica
ENSHCOG00000019527	cpsf2	98	84.537	ENSPTRG00000006651	CPSF2	100	84.537	Pan_troglodytes
ENSHCOG00000019527	cpsf2	98	84.664	ENSPANG00000017417	CPSF2	100	84.664	Papio_anubis
ENSHCOG00000019527	cpsf2	98	83.777	ENSPKIG00000021453	cpsf2	100	83.777	Paramormyrops_kingsleyae
ENSHCOG00000019527	cpsf2	98	84.918	ENSPSIG00000006289	CPSF2	100	84.918	Pelodiscus_sinensis
ENSHCOG00000019527	cpsf2	74	88.167	ENSPMGG00000002511	cpsf2	99	88.167	Periophthalmus_magnuspinnatus
ENSHCOG00000019527	cpsf2	98	84.411	ENSPEMG00000007917	Cpsf2	100	84.411	Peromyscus_maniculatus_bairdii
ENSHCOG00000019527	cpsf2	98	72.898	ENSPMAG00000006205	cpsf2	100	73.149	Petromyzon_marinus
ENSHCOG00000019527	cpsf2	98	85.171	ENSPCIG00000011393	CPSF2	100	85.171	Phascolarctos_cinereus
ENSHCOG00000019527	cpsf2	98	93.011	ENSPFOG00000018648	cpsf2	100	93.011	Poecilia_formosa
ENSHCOG00000019527	cpsf2	99	92.658	ENSPLAG00000019199	cpsf2	99	92.658	Poecilia_latipinna
ENSHCOG00000019527	cpsf2	95	92.876	ENSPMEG00000012100	cpsf2	100	92.761	Poecilia_mexicana
ENSHCOG00000019527	cpsf2	98	92.884	ENSPREG00000008960	cpsf2	100	92.884	Poecilia_reticulata
ENSHCOG00000019527	cpsf2	63	80.119	ENSPPYG00000029685	-	100	80.119	Pongo_abelii
ENSHCOG00000019527	cpsf2	98	84.411	ENSPCAG00000012477	CPSF2	100	84.411	Procavia_capensis
ENSHCOG00000019527	cpsf2	98	84.664	ENSPCOG00000026387	CPSF2	100	84.664	Propithecus_coquereli
ENSHCOG00000019527	cpsf2	63	90.816	ENSPVAG00000004223	CPSF2	65	90.816	Pteropus_vampyrus
ENSHCOG00000019527	cpsf2	98	92.386	ENSPNYG00000023356	cpsf2	100	92.386	Pundamilia_nyererei
ENSHCOG00000019527	cpsf2	98	89.480	ENSPNAG00000001849	cpsf2	100	89.480	Pygocentrus_nattereri
ENSHCOG00000019527	cpsf2	98	84.537	ENSRNOG00000005733	Cpsf2	100	84.537	Rattus_norvegicus
ENSHCOG00000019527	cpsf2	98	84.664	ENSRBIG00000044792	CPSF2	100	84.664	Rhinopithecus_bieti
ENSHCOG00000019527	cpsf2	98	84.664	ENSRROG00000034875	CPSF2	100	84.664	Rhinopithecus_roxellana
ENSHCOG00000019527	cpsf2	98	84.791	ENSSBOG00000024571	CPSF2	100	84.791	Saimiri_boliviensis_boliviensis
ENSHCOG00000019527	cpsf2	98	85.044	ENSSHAG00000010458	CPSF2	100	85.044	Sarcophilus_harrisii
ENSHCOG00000019527	cpsf2	98	89.607	ENSSFOG00015002117	cpsf2	100	89.734	Scleropages_formosus
ENSHCOG00000019527	cpsf2	98	92.640	ENSSMAG00000002001	cpsf2	100	93.147	Scophthalmus_maximus
ENSHCOG00000019527	cpsf2	98	93.901	ENSSDUG00000004084	cpsf2	100	93.901	Seriola_dumerili
ENSHCOG00000019527	cpsf2	98	93.774	ENSSLDG00000024330	cpsf2	100	93.774	Seriola_lalandi_dorsalis
ENSHCOG00000019527	cpsf2	57	93.333	ENSSARG00000009784	-	63	95.455	Sorex_araneus
ENSHCOG00000019527	cpsf2	98	84.791	ENSSPUG00000013485	CPSF2	100	84.791	Sphenodon_punctatus
ENSHCOG00000019527	cpsf2	98	93.774	ENSSPAG00000013284	cpsf2	100	93.774	Stegastes_partitus
ENSHCOG00000019527	cpsf2	98	84.411	ENSSSCG00000002447	CPSF2	100	84.411	Sus_scrofa
ENSHCOG00000019527	cpsf2	98	84.898	ENSTGUG00000012571	-	100	84.898	Taeniopygia_guttata
ENSHCOG00000019527	cpsf2	98	91.995	ENSTRUG00000003742	cpsf2	100	91.995	Takifugu_rubripes
ENSHCOG00000019527	cpsf2	98	90.748	ENSTNIG00000012228	cpsf2	100	91.635	Tetraodon_nigroviridis
ENSHCOG00000019527	cpsf2	85	84.848	ENSTBEG00000004530	CPSF2	91	84.848	Tupaia_belangeri
ENSHCOG00000019527	cpsf2	87	89.583	ENSTTRG00000008697	CPSF2	88	89.583	Tursiops_truncatus
ENSHCOG00000019527	cpsf2	98	84.664	ENSUAMG00000028071	CPSF2	100	84.664	Ursus_americanus
ENSHCOG00000019527	cpsf2	98	84.664	ENSUMAG00000005029	CPSF2	99	89.346	Ursus_maritimus
ENSHCOG00000019527	cpsf2	98	84.518	ENSVPAG00000003503	CPSF2	100	84.518	Vicugna_pacos
ENSHCOG00000019527	cpsf2	98	84.537	ENSVVUG00000024642	CPSF2	100	84.537	Vulpes_vulpes
ENSHCOG00000019527	cpsf2	98	84.030	ENSXETG00000010289	cpsf2	100	84.030	Xenopus_tropicalis
ENSHCOG00000019527	cpsf2	98	93.011	ENSXCOG00000001764	cpsf2	100	93.011	Xiphophorus_couchianus
ENSHCOG00000019527	cpsf2	98	93.393	ENSXMAG00000017048	cpsf2	100	93.393	Xiphophorus_maculatus