EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000019548 (Gene tree)
Gene ID: 109530040
Gene Symbol: farsa
Alias: farsla|wu:fj21a11|zgc:136506|zgc:158185
Full Name: phenylalanyl-tRNA synthetase subunit alpha
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 9666 bases
Position: chrKV880388.1:589376-599041
Accession: 109530040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015865	tRNA-synt_2d	PF01409.20	7.7e-91	1	1
ENSHCOP00000015870	tRNA-synt_2d	PF01409.20	7.7e-91	1	1
ENSHCOP00000027602	tRNA-synt_2d	PF01409.20	7.7e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000028244	-	3399	-	ENSHCOP00000015870	497 (aa)	-	UPI00094ECF85
ENSHCOT00000023894	-	2281	XM_019893546	ENSHCOP00000027602	497 (aa)	XP_019749105	UPI00094ECF85
ENSHCOT00000023901	-	3399	-	ENSHCOP00000015865	497 (aa)	-	UPI00094ECF85

Gene Model

Click here to download ENSHCOG00000019548's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019548	farsa	100	75.453	ENSG00000179115	FARSA	99	78.443	Homo_sapiens
ENSHCOG00000019548	farsa	100	92.153	ENSAPOG00000011465	farsa	100	92.153	Acanthochromis_polyacanthus
ENSHCOG00000019548	farsa	100	75.855	ENSAMEG00000012446	FARSA	98	75.855	Ailuropoda_melanoleuca
ENSHCOG00000019548	farsa	100	86.519	ENSACIG00000020499	farsa	100	86.519	Amphilophus_citrinellus
ENSHCOG00000019548	farsa	100	92.757	ENSAOCG00000000581	farsa	100	92.757	Amphiprion_ocellaris
ENSHCOG00000019548	farsa	100	92.555	ENSAPEG00000017695	farsa	100	92.555	Amphiprion_percula
ENSHCOG00000019548	farsa	100	82.294	ENSATEG00000012807	farsa	100	82.294	Anabas_testudineus
ENSHCOG00000019548	farsa	100	77.309	ENSATEG00000012633	farsa	100	77.309	Anabas_testudineus
ENSHCOG00000019548	farsa	99	76.600	ENSACAG00000017166	FARSA	84	76.600	Anolis_carolinensis
ENSHCOG00000019548	farsa	100	75.050	ENSANAG00000037420	FARSA	98	75.050	Aotus_nancymaae
ENSHCOG00000019548	farsa	100	91.147	ENSACLG00000001716	farsa	100	91.147	Astatotilapia_calliptera
ENSHCOG00000019548	farsa	100	85.714	ENSAMXG00000037912	farsa	100	85.714	Astyanax_mexicanus
ENSHCOG00000019548	farsa	100	74.648	ENSBTAG00000021374	FARSA	98	74.648	Bos_taurus
ENSHCOG00000019548	farsa	99	60.362	WBGene00001497	fars-1	99	60.362	Caenorhabditis_elegans
ENSHCOG00000019548	farsa	99	74.797	ENSCJAG00000004686	FARSA	98	70.825	Callithrix_jacchus
ENSHCOG00000019548	farsa	100	76.258	ENSCAFG00000017096	FARSA	98	76.258	Canis_familiaris
ENSHCOG00000019548	farsa	100	76.258	ENSCAFG00020005315	FARSA	98	76.258	Canis_lupus_dingo
ENSHCOG00000019548	farsa	100	71.429	ENSCHIG00000022617	FARSA	98	71.429	Capra_hircus
ENSHCOG00000019548	farsa	92	73.144	ENSTSYG00000002595	FARSA	83	73.144	Carlito_syrichta
ENSHCOG00000019548	farsa	90	76.786	ENSCAPG00000011353	FARSA	95	76.786	Cavia_aperea
ENSHCOG00000019548	farsa	100	75.252	ENSCPOG00000000787	FARSA	98	75.252	Cavia_porcellus
ENSHCOG00000019548	farsa	100	74.849	ENSCCAG00000028176	FARSA	98	74.849	Cebus_capucinus
ENSHCOG00000019548	farsa	99	74.798	ENSCLAG00000015489	FARSA	98	74.798	Chinchilla_lanigera
ENSHCOG00000019548	farsa	94	77.253	ENSCSAG00000006530	FARSA	98	77.253	Chlorocebus_sabaeus
ENSHCOG00000019548	farsa	96	79.079	ENSCPBG00000023915	FARSA	98	77.890	Chrysemys_picta_bellii
ENSHCOG00000019548	farsa	98	67.143	ENSCING00000002567	-	98	67.143	Ciona_intestinalis
ENSHCOG00000019548	farsa	99	67.404	ENSCSAVG00000010683	-	98	67.404	Ciona_savignyi
ENSHCOG00000019548	farsa	100	75.453	ENSCANG00000043649	-	98	75.453	Colobus_angolensis_palliatus
ENSHCOG00000019548	farsa	100	76.660	ENSCGRG00001019769	Farsa	98	76.660	Cricetulus_griseus_chok1gshd
ENSHCOG00000019548	farsa	100	76.660	ENSCGRG00000013415	Farsa	98	76.660	Cricetulus_griseus_crigri
ENSHCOG00000019548	farsa	100	89.738	ENSCSEG00000016214	farsa	96	89.738	Cynoglossus_semilaevis
ENSHCOG00000019548	farsa	100	89.537	ENSCVAG00000007907	farsa	100	89.537	Cyprinodon_variegatus
ENSHCOG00000019548	farsa	100	87.525	ENSDARG00000098825	farsa	100	87.525	Danio_rerio
ENSHCOG00000019548	farsa	96	77.101	ENSDNOG00000032350	FARSA	98	77.101	Dasypus_novemcinctus
ENSHCOG00000019548	farsa	99	76.008	ENSDORG00000010118	Farsa	98	76.008	Dipodomys_ordii
ENSHCOG00000019548	farsa	99	63.968	FBgn0030007	alpha-PheRS	99	63.968	Drosophila_melanogaster
ENSHCOG00000019548	farsa	100	67.807	ENSETEG00000018673	FARSA	98	67.807	Echinops_telfairi
ENSHCOG00000019548	farsa	60	68.243	ENSEBUG00000008545	farsa	99	68.243	Eptatretus_burgeri
ENSHCOG00000019548	farsa	93	64.717	ENSEASG00005004093	FARSA	95	64.717	Equus_asinus_asinus
ENSHCOG00000019548	farsa	100	75.453	ENSECAG00000015139	FARSA	93	75.453	Equus_caballus
ENSHCOG00000019548	farsa	100	88.129	ENSELUG00000010183	farsa	100	88.129	Esox_lucius
ENSHCOG00000019548	farsa	100	75.654	ENSFCAG00000023511	FARSA	98	75.654	Felis_catus
ENSHCOG00000019548	farsa	99	75.403	ENSFDAG00000005987	FARSA	98	75.403	Fukomys_damarensis
ENSHCOG00000019548	farsa	100	89.537	ENSFHEG00000009382	farsa	94	89.537	Fundulus_heteroclitus
ENSHCOG00000019548	farsa	100	84.337	ENSGMOG00000018319	farsa	100	84.337	Gadus_morhua
ENSHCOG00000019548	farsa	99	72.782	ENSGALG00000040258	FARSA	87	72.782	Gallus_gallus
ENSHCOG00000019548	farsa	100	89.940	ENSGAFG00000014146	farsa	100	89.940	Gambusia_affinis
ENSHCOG00000019548	farsa	100	88.353	ENSGACG00000006278	farsa	100	88.353	Gasterosteus_aculeatus
ENSHCOG00000019548	farsa	99	78.093	ENSGAGG00000000753	FARSA	98	78.093	Gopherus_agassizii
ENSHCOG00000019548	farsa	100	75.453	ENSGGOG00000003418	FARSA	98	75.453	Gorilla_gorilla
ENSHCOG00000019548	farsa	100	91.147	ENSHBUG00000019852	farsa	100	91.147	Haplochromis_burtoni
ENSHCOG00000019548	farsa	99	74.798	ENSHGLG00000005213	FARSA	98	74.798	Heterocephalus_glaber_female
ENSHCOG00000019548	farsa	99	75.000	ENSHGLG00100009586	FARSA	98	75.000	Heterocephalus_glaber_male
ENSHCOG00000019548	farsa	100	87.726	ENSIPUG00000007635	farsa	100	87.726	Ictalurus_punctatus
ENSHCOG00000019548	farsa	100	75.050	ENSSTOG00000008748	FARSA	98	75.050	Ictidomys_tridecemlineatus
ENSHCOG00000019548	farsa	100	87.726	ENSKMAG00000010698	farsa	100	87.726	Kryptolebias_marmoratus
ENSHCOG00000019548	farsa	86	88.471	ENSLBEG00000001258	farsa	97	88.471	Labrus_bergylta
ENSHCOG00000019548	farsa	100	89.738	ENSLBEG00000006757	-	100	89.738	Labrus_bergylta
ENSHCOG00000019548	farsa	93	84.449	ENSLOCG00000008389	farsa	96	84.449	Lepisosteus_oculatus
ENSHCOG00000019548	farsa	100	75.050	ENSLAFG00000016154	FARSA	98	75.050	Loxodonta_africana
ENSHCOG00000019548	farsa	100	75.252	ENSMFAG00000030595	FARSA	98	75.252	Macaca_fascicularis
ENSHCOG00000019548	farsa	100	75.252	ENSMMUG00000004390	FARSA	98	75.252	Macaca_mulatta
ENSHCOG00000019548	farsa	100	75.252	ENSMNEG00000043866	FARSA	98	75.252	Macaca_nemestrina
ENSHCOG00000019548	farsa	100	75.100	ENSMLEG00000029157	FARSA	98	75.100	Mandrillus_leucophaeus
ENSHCOG00000019548	farsa	100	89.738	ENSMAMG00000010636	farsa	100	89.738	Mastacembelus_armatus
ENSHCOG00000019548	farsa	100	91.147	ENSMZEG00005002319	farsa	100	91.147	Maylandia_zebra
ENSHCOG00000019548	farsa	100	76.660	ENSMAUG00000009188	Farsa	98	76.660	Mesocricetus_auratus
ENSHCOG00000019548	farsa	100	75.654	ENSMICG00000016272	FARSA	98	75.654	Microcebus_murinus
ENSHCOG00000019548	farsa	99	76.411	ENSMOCG00000011399	Farsa	98	76.411	Microtus_ochrogaster
ENSHCOG00000019548	farsa	100	86.117	ENSMMOG00000006287	farsa	100	86.117	Mola_mola
ENSHCOG00000019548	farsa	99	76.210	ENSMODG00000011519	FARSA	100	76.210	Monodelphis_domestica
ENSHCOG00000019548	farsa	100	86.720	ENSMALG00000001972	farsa	100	86.720	Monopterus_albus
ENSHCOG00000019548	farsa	99	76.008	MGP_CAROLIEiJ_G0031312	Farsa	98	76.008	Mus_caroli
ENSHCOG00000019548	farsa	99	76.008	ENSMUSG00000003808	Farsa	98	76.008	Mus_musculus
ENSHCOG00000019548	farsa	99	75.605	MGP_PahariEiJ_G0022917	Farsa	98	75.605	Mus_pahari
ENSHCOG00000019548	farsa	99	76.210	MGP_SPRETEiJ_G0032431	Farsa	98	76.210	Mus_spretus
ENSHCOG00000019548	farsa	100	76.056	ENSMPUG00000004400	FARSA	98	76.056	Mustela_putorius_furo
ENSHCOG00000019548	farsa	100	76.056	ENSMLUG00000012767	FARSA	98	76.056	Myotis_lucifugus
ENSHCOG00000019548	farsa	74	76.965	ENSNGAG00000018353	Farsa	100	76.965	Nannospalax_galili
ENSHCOG00000019548	farsa	100	90.543	ENSNBRG00000010063	farsa	100	90.543	Neolamprologus_brichardi
ENSHCOG00000019548	farsa	100	75.050	ENSNLEG00000012899	FARSA	98	75.050	Nomascus_leucogenys
ENSHCOG00000019548	farsa	100	75.654	ENSMEUG00000014253	FARSA	100	75.654	Notamacropus_eugenii
ENSHCOG00000019548	farsa	100	74.849	ENSOPRG00000005004	FARSA	98	74.849	Ochotona_princeps
ENSHCOG00000019548	farsa	99	74.798	ENSODEG00000010433	FARSA	98	74.798	Octodon_degus
ENSHCOG00000019548	farsa	100	91.147	ENSONIG00000008075	farsa	100	91.147	Oreochromis_niloticus
ENSHCOG00000019548	farsa	100	89.537	ENSORLG00000016406	farsa	90	89.537	Oryzias_latipes
ENSHCOG00000019548	farsa	100	89.336	ENSORLG00020021978	farsa	100	89.336	Oryzias_latipes_hni
ENSHCOG00000019548	farsa	100	89.336	ENSORLG00015015045	farsa	100	89.336	Oryzias_latipes_hsok
ENSHCOG00000019548	farsa	100	89.135	ENSOMEG00000017367	farsa	97	89.135	Oryzias_melastigma
ENSHCOG00000019548	farsa	100	75.654	ENSOGAG00000012243	FARSA	98	75.654	Otolemur_garnettii
ENSHCOG00000019548	farsa	100	74.849	ENSOARG00000009991	FARSA	92	74.849	Ovis_aries
ENSHCOG00000019548	farsa	100	75.252	ENSPPAG00000034266	FARSA	98	75.252	Pan_paniscus
ENSHCOG00000019548	farsa	100	75.654	ENSPPRG00000000346	FARSA	98	75.654	Panthera_pardus
ENSHCOG00000019548	farsa	92	78.214	ENSPTIG00000011502	FARSA	94	78.214	Panthera_tigris_altaica
ENSHCOG00000019548	farsa	100	75.252	ENSPTRG00000010550	FARSA	98	75.252	Pan_troglodytes
ENSHCOG00000019548	farsa	100	75.252	ENSPANG00000010978	FARSA	98	71.429	Papio_anubis
ENSHCOG00000019548	farsa	100	85.915	ENSPKIG00000007170	farsa	100	85.915	Paramormyrops_kingsleyae
ENSHCOG00000019548	farsa	90	73.246	ENSPSIG00000012701	FARSA	98	74.667	Pelodiscus_sinensis
ENSHCOG00000019548	farsa	100	84.105	ENSPMGG00000001401	farsa	100	84.105	Periophthalmus_magnuspinnatus
ENSHCOG00000019548	farsa	100	75.654	ENSPEMG00000012560	Farsa	98	75.654	Peromyscus_maniculatus_bairdii
ENSHCOG00000019548	farsa	100	77.867	ENSPMAG00000008453	farsa	100	77.867	Petromyzon_marinus
ENSHCOG00000019548	farsa	100	75.855	ENSPCIG00000019294	FARSA	100	75.855	Phascolarctos_cinereus
ENSHCOG00000019548	farsa	100	89.940	ENSPFOG00000001201	farsa	100	89.940	Poecilia_formosa
ENSHCOG00000019548	farsa	100	89.940	ENSPLAG00000018191	farsa	100	89.940	Poecilia_latipinna
ENSHCOG00000019548	farsa	100	90.141	ENSPMEG00000013547	farsa	100	90.141	Poecilia_mexicana
ENSHCOG00000019548	farsa	100	84.507	ENSPREG00000013620	farsa	100	84.507	Poecilia_reticulata
ENSHCOG00000019548	farsa	100	75.050	ENSPPYG00000009615	FARSA	98	75.050	Pongo_abelii
ENSHCOG00000019548	farsa	100	74.648	ENSPCAG00000015721	FARSA	98	74.648	Procavia_capensis
ENSHCOG00000019548	farsa	100	75.453	ENSPCOG00000014412	FARSA	98	75.453	Propithecus_coquereli
ENSHCOG00000019548	farsa	86	86.111	ENSPVAG00000014714	FARSA	84	86.111	Pteropus_vampyrus
ENSHCOG00000019548	farsa	100	91.147	ENSPNYG00000002144	farsa	100	91.147	Pundamilia_nyererei
ENSHCOG00000019548	farsa	100	87.324	ENSPNAG00000000869	farsa	100	87.324	Pygocentrus_nattereri
ENSHCOG00000019548	farsa	99	76.008	ENSRNOG00000003149	Farsa	98	76.008	Rattus_norvegicus
ENSHCOG00000019548	farsa	100	75.453	ENSRBIG00000025585	FARSA	96	77.556	Rhinopithecus_bieti
ENSHCOG00000019548	farsa	100	75.453	ENSRROG00000040046	FARSA	98	71.630	Rhinopithecus_roxellana
ENSHCOG00000019548	farsa	93	51.059	YFL022C	FRS2	93	51.059	Saccharomyces_cerevisiae
ENSHCOG00000019548	farsa	100	75.050	ENSSBOG00000031362	FARSA	98	75.050	Saimiri_boliviensis_boliviensis
ENSHCOG00000019548	farsa	90	76.957	ENSSHAG00000015006	FARSA	100	76.957	Sarcophilus_harrisii
ENSHCOG00000019548	farsa	100	83.099	ENSSFOG00015014864	farsa	100	83.099	Scleropages_formosus
ENSHCOG00000019548	farsa	100	90.141	ENSSMAG00000002358	farsa	100	90.141	Scophthalmus_maximus
ENSHCOG00000019548	farsa	100	91.348	ENSSDUG00000008631	farsa	100	91.348	Seriola_dumerili
ENSHCOG00000019548	farsa	100	90.946	ENSSLDG00000017108	farsa	100	90.946	Seriola_lalandi_dorsalis
ENSHCOG00000019548	farsa	67	97.059	ENSSARG00000006579	-	68	97.059	Sorex_araneus
ENSHCOG00000019548	farsa	90	65.778	ENSSPUG00000012509	FARSA	98	65.427	Sphenodon_punctatus
ENSHCOG00000019548	farsa	100	91.549	ENSSPAG00000018292	farsa	92	91.549	Stegastes_partitus
ENSHCOG00000019548	farsa	100	75.654	ENSSSCG00000013745	FARSA	98	75.654	Sus_scrofa
ENSHCOG00000019548	farsa	100	76.861	ENSTRUG00000010624	farsa	100	76.861	Takifugu_rubripes
ENSHCOG00000019548	farsa	100	80.885	ENSTNIG00000008330	farsa	100	80.885	Tetraodon_nigroviridis
ENSHCOG00000019548	farsa	90	73.661	ENSTBEG00000000396	FARSA	98	73.661	Tupaia_belangeri
ENSHCOG00000019548	farsa	87	94.118	ENSTTRG00000003599	FARSA	85	94.118	Tursiops_truncatus
ENSHCOG00000019548	farsa	100	76.056	ENSUAMG00000010230	FARSA	98	76.056	Ursus_americanus
ENSHCOG00000019548	farsa	100	76.056	ENSUMAG00000006110	FARSA	98	76.056	Ursus_maritimus
ENSHCOG00000019548	farsa	100	76.258	ENSVVUG00000024145	FARSA	98	76.258	Vulpes_vulpes
ENSHCOG00000019548	farsa	100	78.313	ENSXETG00000007936	farsa	100	78.313	Xenopus_tropicalis
ENSHCOG00000019548	farsa	100	80.321	ENSXCOG00000015512	farsa	100	80.321	Xiphophorus_couchianus
ENSHCOG00000019548	farsa	100	88.732	ENSXMAG00000008832	farsa	100	88.732	Xiphophorus_maculatus