EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000019596 (Gene tree)
Gene ID: 109523313
Gene Symbol: si:ch1073-55a19.2
Alias: -
Full Name: E3 SUMO-protein ligase RanBP2-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 23305 bases
Position: chrKV880190.1:1474975-1498279
Accession: 109523313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015909	zf-RanBP	PF00641.18	3.1e-17	1	2
ENSHCOP00000015909	zf-RanBP	PF00641.18	3.1e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023945	-	9800	XM_019882357	ENSHCOP00000015909	2954 (aa)	XP_019737916	UPI00094E0D09

Gene Model

Click here to download ENSHCOG00000019596's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019596	si:ch1073-55a19.2	100	51.002	ENSG00000153201	RANBP2	90	65.217	Homo_sapiens
ENSHCOG00000019596	si:ch1073-55a19.2	100	73.823	ENSAPOG00000017146	si:ch1073-55a19.2	100	75.735	Acanthochromis_polyacanthus
ENSHCOG00000019596	si:ch1073-55a19.2	99	50.479	ENSAMEG00000013078	RANBP2	100	50.841	Ailuropoda_melanoleuca
ENSHCOG00000019596	si:ch1073-55a19.2	100	71.547	ENSACIG00000001203	si:ch1073-55a19.2	100	71.587	Amphilophus_citrinellus
ENSHCOG00000019596	si:ch1073-55a19.2	100	73.754	ENSAPEG00000012495	si:ch1073-55a19.2	100	75.327	Amphiprion_percula
ENSHCOG00000019596	si:ch1073-55a19.2	100	73.253	ENSATEG00000001716	si:ch1073-55a19.2	100	73.318	Anabas_testudineus
ENSHCOG00000019596	si:ch1073-55a19.2	95	51.350	ENSACAG00000002091	RANBP2	100	51.350	Anolis_carolinensis
ENSHCOG00000019596	si:ch1073-55a19.2	100	54.887	ENSANAG00000023124	RANBP2	100	54.286	Aotus_nancymaae
ENSHCOG00000019596	si:ch1073-55a19.2	100	72.481	ENSACLG00000020500	si:ch1073-55a19.2	52	68.101	Astatotilapia_calliptera
ENSHCOG00000019596	si:ch1073-55a19.2	100	48.444	ENSBTAG00000000152	RANBP2	100	48.324	Bos_taurus
ENSHCOG00000019596	si:ch1073-55a19.2	100	55.639	ENSCJAG00000001189	RANBP2	100	50.958	Callithrix_jacchus
ENSHCOG00000019596	si:ch1073-55a19.2	100	49.065	ENSCAFG00000023061	RANBP2	100	47.536	Canis_familiaris
ENSHCOG00000019596	si:ch1073-55a19.2	100	51.246	ENSCAFG00020009314	RANBP2	100	51.969	Canis_lupus_dingo
ENSHCOG00000019596	si:ch1073-55a19.2	100	50.413	ENSCHIG00000012686	RANBP2	100	48.792	Capra_hircus
ENSHCOG00000019596	si:ch1073-55a19.2	99	55.000	ENSTSYG00000001656	RANBP2	95	55.000	Carlito_syrichta
ENSHCOG00000019596	si:ch1073-55a19.2	77	54.887	ENSCAPG00000010687	RANBP2	100	50.609	Cavia_aperea
ENSHCOG00000019596	si:ch1073-55a19.2	100	50.016	ENSCPOG00000000392	RANBP2	64	51.175	Cavia_porcellus
ENSHCOG00000019596	si:ch1073-55a19.2	100	50.171	ENSCCAG00000028166	RANBP2	100	51.389	Cebus_capucinus
ENSHCOG00000019596	si:ch1073-55a19.2	100	56.391	ENSCATG00000032597	RANBP2	100	48.913	Cercocebus_atys
ENSHCOG00000019596	si:ch1073-55a19.2	100	49.021	ENSCLAG00000010533	RANBP2	100	49.008	Chinchilla_lanigera
ENSHCOG00000019596	si:ch1073-55a19.2	100	56.391	ENSCSAG00000017019	RANBP2	100	51.147	Chlorocebus_sabaeus
ENSHCOG00000019596	si:ch1073-55a19.2	65	61.508	ENSCHOG00000012659	-	58	61.508	Choloepus_hoffmanni
ENSHCOG00000019596	si:ch1073-55a19.2	100	52.229	ENSCPBG00000006985	RANBP2	100	52.278	Chrysemys_picta_bellii
ENSHCOG00000019596	si:ch1073-55a19.2	97	49.756	ENSCANG00000041469	RANBP2	99	51.490	Colobus_angolensis_palliatus
ENSHCOG00000019596	si:ch1073-55a19.2	100	50.032	ENSCGRG00001000642	Ranbp2	100	51.099	Cricetulus_griseus_chok1gshd
ENSHCOG00000019596	si:ch1073-55a19.2	100	49.873	ENSCGRG00000008995	Ranbp2	100	50.830	Cricetulus_griseus_crigri
ENSHCOG00000019596	si:ch1073-55a19.2	100	66.710	ENSCSEG00000013280	si:ch1073-55a19.2	100	66.365	Cynoglossus_semilaevis
ENSHCOG00000019596	si:ch1073-55a19.2	100	65.087	ENSCVAG00000016050	si:ch1073-55a19.2	100	65.570	Cyprinodon_variegatus
ENSHCOG00000019596	si:ch1073-55a19.2	100	54.425	ENSDARG00000093125	RANBP2	100	53.978	Danio_rerio
ENSHCOG00000019596	si:ch1073-55a19.2	99	51.107	ENSDNOG00000040501	RANBP2	99	50.996	Dasypus_novemcinctus
ENSHCOG00000019596	si:ch1073-55a19.2	100	50.634	ENSDORG00000002206	Ranbp2	100	52.054	Dipodomys_ordii
ENSHCOG00000019596	si:ch1073-55a19.2	74	56.257	ENSETEG00000008891	-	65	55.789	Echinops_telfairi
ENSHCOG00000019596	si:ch1073-55a19.2	99	47.010	ENSEBUG00000010057	si:ch1073-55a19.2	83	60.656	Eptatretus_burgeri
ENSHCOG00000019596	si:ch1073-55a19.2	100	56.391	ENSEASG00005012918	RANBP2	100	55.714	Equus_asinus_asinus
ENSHCOG00000019596	si:ch1073-55a19.2	100	56.391	ENSECAG00000008458	RANBP2	96	55.714	Equus_caballus
ENSHCOG00000019596	si:ch1073-55a19.2	80	61.574	ENSEEUG00000007806	RANBP2	79	61.574	Erinaceus_europaeus
ENSHCOG00000019596	si:ch1073-55a19.2	99	67.478	ENSELUG00000007763	si:ch1073-55a19.2	93	68.874	Esox_lucius
ENSHCOG00000019596	si:ch1073-55a19.2	99	50.421	ENSFALG00000003519	RANBP2	99	50.453	Ficedula_albicollis
ENSHCOG00000019596	si:ch1073-55a19.2	100	49.506	ENSFDAG00000016912	RANBP2	100	50.355	Fukomys_damarensis
ENSHCOG00000019596	si:ch1073-55a19.2	100	68.665	ENSFHEG00000009774	si:ch1073-55a19.2	100	71.028	Fundulus_heteroclitus
ENSHCOG00000019596	si:ch1073-55a19.2	98	75.155	ENSGMOG00000007071	si:ch1073-55a19.2	94	75.155	Gadus_morhua
ENSHCOG00000019596	si:ch1073-55a19.2	100	68.558	ENSGAFG00000010966	si:ch1073-55a19.2	100	69.612	Gambusia_affinis
ENSHCOG00000019596	si:ch1073-55a19.2	100	66.656	ENSGACG00000006831	si:ch1073-55a19.2	60	58.030	Gasterosteus_aculeatus
ENSHCOG00000019596	si:ch1073-55a19.2	93	53.777	ENSGAGG00000025039	RANBP2	99	52.381	Gopherus_agassizii
ENSHCOG00000019596	si:ch1073-55a19.2	100	72.248	ENSHBUG00000000053	si:ch1073-55a19.2	52	68.101	Haplochromis_burtoni
ENSHCOG00000019596	si:ch1073-55a19.2	100	51.400	ENSHGLG00000018887	RANBP2	100	51.004	Heterocephalus_glaber_female
ENSHCOG00000019596	si:ch1073-55a19.2	100	49.889	ENSHGLG00100007365	RANBP2	100	50.678	Heterocephalus_glaber_male
ENSHCOG00000019596	si:ch1073-55a19.2	100	57.727	ENSIPUG00000019614	si:ch1073-55a19.2	100	57.357	Ictalurus_punctatus
ENSHCOG00000019596	si:ch1073-55a19.2	100	49.984	ENSSTOG00000019518	RANBP2	96	52.207	Ictidomys_tridecemlineatus
ENSHCOG00000019596	si:ch1073-55a19.2	100	50.239	ENSJJAG00000021292	Ranbp2	100	50.176	Jaculus_jaculus
ENSHCOG00000019596	si:ch1073-55a19.2	100	71.001	ENSKMAG00000001158	si:ch1073-55a19.2	52	65.644	Kryptolebias_marmoratus
ENSHCOG00000019596	si:ch1073-55a19.2	94	70.534	ENSLBEG00000027979	si:ch1073-55a19.2	99	70.293	Labrus_bergylta
ENSHCOG00000019596	si:ch1073-55a19.2	100	51.930	ENSLACG00000009728	RANBP2	100	51.785	Latimeria_chalumnae
ENSHCOG00000019596	si:ch1073-55a19.2	100	58.506	ENSLOCG00000010333	si:ch1073-55a19.2	100	58.218	Lepisosteus_oculatus
ENSHCOG00000019596	si:ch1073-55a19.2	100	50.582	ENSLAFG00000000740	RANBP2	100	50.555	Loxodonta_africana
ENSHCOG00000019596	si:ch1073-55a19.2	100	56.391	ENSMFAG00000029029	RANBP2	100	51.863	Macaca_fascicularis
ENSHCOG00000019596	si:ch1073-55a19.2	100	56.391	ENSMMUG00000021019	RANBP2	100	51.863	Macaca_mulatta
ENSHCOG00000019596	si:ch1073-55a19.2	100	56.391	ENSMNEG00000043706	RANBP2	100	51.804	Macaca_nemestrina
ENSHCOG00000019596	si:ch1073-55a19.2	99	56.391	ENSMLEG00000037350	RANBP2	100	51.688	Mandrillus_leucophaeus
ENSHCOG00000019596	si:ch1073-55a19.2	100	73.781	ENSMAMG00000017900	si:ch1073-55a19.2	100	73.034	Mastacembelus_armatus
ENSHCOG00000019596	si:ch1073-55a19.2	100	72.416	ENSMZEG00005010956	si:ch1073-55a19.2	52	68.039	Maylandia_zebra
ENSHCOG00000019596	si:ch1073-55a19.2	99	49.370	ENSMGAG00000014831	-	99	49.241	Meleagris_gallopavo
ENSHCOG00000019596	si:ch1073-55a19.2	100	49.731	ENSMAUG00000013313	Ranbp2	100	50.818	Mesocricetus_auratus
ENSHCOG00000019596	si:ch1073-55a19.2	100	54.676	ENSMICG00000011864	RANBP2	100	54.676	Microcebus_murinus
ENSHCOG00000019596	si:ch1073-55a19.2	100	50.478	ENSMOCG00000012516	Ranbp2	100	56.429	Microtus_ochrogaster
ENSHCOG00000019596	si:ch1073-55a19.2	100	67.626	ENSMMOG00000005743	si:ch1073-55a19.2	99	79.284	Mola_mola
ENSHCOG00000019596	si:ch1073-55a19.2	98	53.506	ENSMODG00000002914	RANBP2	97	53.506	Monodelphis_domestica
ENSHCOG00000019596	si:ch1073-55a19.2	100	72.280	ENSMALG00000004359	si:ch1073-55a19.2	100	72.356	Monopterus_albus
ENSHCOG00000019596	si:ch1073-55a19.2	100	50.000	ENSMUSG00000003226	Ranbp2	100	50.740	Mus_musculus
ENSHCOG00000019596	si:ch1073-55a19.2	100	50.048	MGP_PahariEiJ_G0030751	Ranbp2	100	50.694	Mus_pahari
ENSHCOG00000019596	si:ch1073-55a19.2	100	49.952	MGP_SPRETEiJ_G0016147	Ranbp2	100	49.936	Mus_spretus
ENSHCOG00000019596	si:ch1073-55a19.2	100	63.830	ENSMPUG00000010754	RANBP2	100	51.483	Mustela_putorius_furo
ENSHCOG00000019596	si:ch1073-55a19.2	99	50.871	ENSMLUG00000005555	RANBP2	100	50.871	Myotis_lucifugus
ENSHCOG00000019596	si:ch1073-55a19.2	100	55.714	ENSNGAG00000016154	Ranbp2	99	55.714	Nannospalax_galili
ENSHCOG00000019596	si:ch1073-55a19.2	100	72.266	ENSNBRG00000004587	si:ch1073-55a19.2	52	67.936	Neolamprologus_brichardi
ENSHCOG00000019596	si:ch1073-55a19.2	99	57.143	ENSNLEG00000007501	RANBP2	99	51.499	Nomascus_leucogenys
ENSHCOG00000019596	si:ch1073-55a19.2	91	55.639	ENSOPRG00000009720	-	94	53.741	Ochotona_princeps
ENSHCOG00000019596	si:ch1073-55a19.2	100	51.197	ENSODEG00000013212	RANBP2	100	51.065	Octodon_degus
ENSHCOG00000019596	si:ch1073-55a19.2	100	67.432	ENSONIG00000004346	si:ch1073-55a19.2	60	64.674	Oreochromis_niloticus
ENSHCOG00000019596	si:ch1073-55a19.2	78	50.270	ENSOANG00000004894	RANBP2	100	51.538	Ornithorhynchus_anatinus
ENSHCOG00000019596	si:ch1073-55a19.2	100	51.317	ENSOCUG00000001165	RANBP2	100	51.897	Oryctolagus_cuniculus
ENSHCOG00000019596	si:ch1073-55a19.2	100	68.179	ENSORLG00000015523	si:ch1073-55a19.2	99	68.368	Oryzias_latipes
ENSHCOG00000019596	si:ch1073-55a19.2	100	67.709	ENSORLG00020003797	si:ch1073-55a19.2	100	66.957	Oryzias_latipes_hni
ENSHCOG00000019596	si:ch1073-55a19.2	100	68.121	ENSORLG00015004994	si:ch1073-55a19.2	52	63.990	Oryzias_latipes_hsok
ENSHCOG00000019596	si:ch1073-55a19.2	100	67.502	ENSOMEG00000022969	si:ch1073-55a19.2	100	66.018	Oryzias_melastigma
ENSHCOG00000019596	si:ch1073-55a19.2	100	50.806	ENSOGAG00000028976	RANBP2	96	55.714	Otolemur_garnettii
ENSHCOG00000019596	si:ch1073-55a19.2	99	48.319	ENSOARG00000000558	RANBP2	100	49.730	Ovis_aries
ENSHCOG00000019596	si:ch1073-55a19.2	100	56.391	ENSPANG00000000990	RANBP2	100	49.651	Papio_anubis
ENSHCOG00000019596	si:ch1073-55a19.2	100	59.890	ENSPKIG00000010971	RANBP2	100	59.636	Paramormyrops_kingsleyae
ENSHCOG00000019596	si:ch1073-55a19.2	88	50.467	ENSPKIG00000021054	-	99	56.296	Paramormyrops_kingsleyae
ENSHCOG00000019596	si:ch1073-55a19.2	99	51.110	ENSPSIG00000007182	RANBP2	99	51.386	Pelodiscus_sinensis
ENSHCOG00000019596	si:ch1073-55a19.2	93	64.433	ENSPEMG00000021565	Ranbp2	99	50.877	Peromyscus_maniculatus_bairdii
ENSHCOG00000019596	si:ch1073-55a19.2	86	48.529	ENSPMAG00000007195	si:ch1073-55a19.2	100	60.584	Petromyzon_marinus
ENSHCOG00000019596	si:ch1073-55a19.2	100	51.709	ENSPCIG00000013912	RANBP2	100	48.433	Phascolarctos_cinereus
ENSHCOG00000019596	si:ch1073-55a19.2	100	67.518	ENSPFOG00000007377	si:ch1073-55a19.2	100	69.361	Poecilia_formosa
ENSHCOG00000019596	si:ch1073-55a19.2	100	68.009	ENSPLAG00000012373	si:ch1073-55a19.2	100	69.317	Poecilia_latipinna
ENSHCOG00000019596	si:ch1073-55a19.2	100	68.006	ENSPMEG00000005561	si:ch1073-55a19.2	51	64.924	Poecilia_mexicana
ENSHCOG00000019596	si:ch1073-55a19.2	97	77.749	ENSPREG00000013331	si:ch1073-55a19.2	100	67.868	Poecilia_reticulata
ENSHCOG00000019596	si:ch1073-55a19.2	70	56.391	ENSPPYG00000012139	-	99	55.714	Pongo_abelii
ENSHCOG00000019596	si:ch1073-55a19.2	54	60.000	ENSPPYG00000029793	-	99	60.000	Pongo_abelii
ENSHCOG00000019596	si:ch1073-55a19.2	95	64.286	ENSPCAG00000000957	RANBP2	98	64.286	Procavia_capensis
ENSHCOG00000019596	si:ch1073-55a19.2	100	56.391	ENSPCOG00000008879	RANBP2	99	55.714	Propithecus_coquereli
ENSHCOG00000019596	si:ch1073-55a19.2	96	58.182	ENSPVAG00000003883	RANBP2	91	58.182	Pteropus_vampyrus
ENSHCOG00000019596	si:ch1073-55a19.2	100	72.248	ENSPNYG00000015971	si:ch1073-55a19.2	52	68.224	Pundamilia_nyererei
ENSHCOG00000019596	si:ch1073-55a19.2	100	61.983	ENSPNAG00000026129	si:ch1073-55a19.2	100	62.062	Pygocentrus_nattereri
ENSHCOG00000019596	si:ch1073-55a19.2	100	49.745	ENSRNOG00000000796	Ranbp2	100	50.325	Rattus_norvegicus
ENSHCOG00000019596	si:ch1073-55a19.2	100	55.639	ENSRBIG00000043515	RANBP2	100	50.497	Rhinopithecus_bieti
ENSHCOG00000019596	si:ch1073-55a19.2	100	55.639	ENSRROG00000026113	RANBP2	65	52.217	Rhinopithecus_roxellana
ENSHCOG00000019596	si:ch1073-55a19.2	100	56.391	ENSSBOG00000035336	RANBP2	99	51.564	Saimiri_boliviensis_boliviensis
ENSHCOG00000019596	si:ch1073-55a19.2	99	51.343	ENSSHAG00000004676	RANBP2	53	51.826	Sarcophilus_harrisii
ENSHCOG00000019596	si:ch1073-55a19.2	99	60.805	ENSSFOG00015003943	-	99	60.574	Scleropages_formosus
ENSHCOG00000019596	si:ch1073-55a19.2	100	57.862	ENSSFOG00015023201	RANBP2	100	57.254	Scleropages_formosus
ENSHCOG00000019596	si:ch1073-55a19.2	100	73.167	ENSSMAG00000007331	si:ch1073-55a19.2	53	67.229	Scophthalmus_maximus
ENSHCOG00000019596	si:ch1073-55a19.2	100	74.756	ENSSDUG00000013160	si:ch1073-55a19.2	53	69.203	Seriola_dumerili
ENSHCOG00000019596	si:ch1073-55a19.2	100	72.394	ENSSLDG00000023392	si:ch1073-55a19.2	100	71.532	Seriola_lalandi_dorsalis
ENSHCOG00000019596	si:ch1073-55a19.2	94	57.073	ENSSARG00000005595	RANBP2	75	57.500	Sorex_araneus
ENSHCOG00000019596	si:ch1073-55a19.2	100	74.098	ENSSPAG00000008000	si:ch1073-55a19.2	52	69.366	Stegastes_partitus
ENSHCOG00000019596	si:ch1073-55a19.2	100	52.632	ENSSSCG00000008136	RANBP2	98	51.536	Sus_scrofa
ENSHCOG00000019596	si:ch1073-55a19.2	99	52.480	ENSTGUG00000009571	RANBP2	100	52.579	Taeniopygia_guttata
ENSHCOG00000019596	si:ch1073-55a19.2	94	50.698	ENSTTRG00000007400	RANBP2	94	51.002	Tursiops_truncatus
ENSHCOG00000019596	si:ch1073-55a19.2	94	49.763	ENSUAMG00000020025	RANBP2	99	50.649	Ursus_americanus
ENSHCOG00000019596	si:ch1073-55a19.2	95	60.870	ENSVPAG00000006676	RANBP2	94	55.000	Vicugna_pacos
ENSHCOG00000019596	si:ch1073-55a19.2	99	56.209	ENSVVUG00000014899	RANBP2	100	51.934	Vulpes_vulpes
ENSHCOG00000019596	si:ch1073-55a19.2	93	53.241	ENSXETG00000016006	ranbp2	100	50.228	Xenopus_tropicalis
ENSHCOG00000019596	si:ch1073-55a19.2	99	67.904	ENSXCOG00000000752	si:ch1073-55a19.2	99	66.495	Xiphophorus_couchianus
ENSHCOG00000019596	si:ch1073-55a19.2	98	77.436	ENSXMAG00000003519	si:ch1073-55a19.2	100	67.197	Xiphophorus_maculatus