EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000019632 (Gene tree)
Gene ID: -
Gene Symbol: hfm1
Alias: si:ch211-83f14.5
Full Name: HFM1%2C ATP-dependent DNA helicase homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 9112 bases
Position: chrKV880096.1:1341843-1350954
Accession: ZDB-GENE-061207-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000027630	ResIII	PF04851.15	2e-11	1	1
ENSHCOP00000027630	DEAD	PF00270.29	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000023951	-	2391	-	ENSHCOP00000027630	797 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000019632's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019632's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000019632	hfm1	75	32.006	ENSHCOG00000021142	ascc3	56	32.006

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019632	hfm1	97	64.216	ENSG00000162669	HFM1	57	64.216	Homo_sapiens
ENSHCOG00000019632	hfm1	100	79.221	ENSAPOG00000005304	hfm1	99	79.221	Acanthochromis_polyacanthus
ENSHCOG00000019632	hfm1	97	64.461	ENSAMEG00000000432	HFM1	56	64.461	Ailuropoda_melanoleuca
ENSHCOG00000019632	hfm1	99	78.960	ENSACIG00000021553	hfm1	76	78.960	Amphilophus_citrinellus
ENSHCOG00000019632	hfm1	100	80.071	ENSAOCG00000022839	hfm1	99	80.071	Amphiprion_ocellaris
ENSHCOG00000019632	hfm1	100	80.118	ENSAPEG00000014316	hfm1	99	80.118	Amphiprion_percula
ENSHCOG00000019632	hfm1	97	81.227	ENSATEG00000019181	hfm1	67	80.577	Anabas_testudineus
ENSHCOG00000019632	hfm1	97	64.216	ENSAPLG00000013639	HFM1	57	64.216	Anas_platyrhynchos
ENSHCOG00000019632	hfm1	97	63.358	ENSANAG00000029513	HFM1	58	63.358	Aotus_nancymaae
ENSHCOG00000019632	hfm1	100	80.098	ENSACLG00000009033	hfm1	99	80.098	Astatotilapia_calliptera
ENSHCOG00000019632	hfm1	98	73.114	ENSAMXG00000006108	hfm1	57	73.114	Astyanax_mexicanus
ENSHCOG00000019632	hfm1	97	64.583	ENSBTAG00000020856	HFM1	57	64.583	Bos_taurus
ENSHCOG00000019632	hfm1	97	63.848	ENSCJAG00000001843	HFM1	57	63.848	Callithrix_jacchus
ENSHCOG00000019632	hfm1	97	63.804	ENSCAFG00000020187	HFM1	56	63.804	Canis_familiaris
ENSHCOG00000019632	hfm1	97	64.093	ENSTSYG00000014250	HFM1	57	64.093	Carlito_syrichta
ENSHCOG00000019632	hfm1	97	63.838	ENSCPOG00000007421	HFM1	58	63.838	Cavia_porcellus
ENSHCOG00000019632	hfm1	97	63.313	ENSCCAG00000033206	HFM1	57	63.313	Cebus_capucinus
ENSHCOG00000019632	hfm1	97	63.848	ENSCATG00000030987	HFM1	57	63.848	Cercocebus_atys
ENSHCOG00000019632	hfm1	97	64.743	ENSCLAG00000005173	HFM1	54	64.743	Chinchilla_lanigera
ENSHCOG00000019632	hfm1	83	49.791	ENSCSAVG00000005094	-	100	49.791	Ciona_savignyi
ENSHCOG00000019632	hfm1	94	60.025	ENSCGRG00001016995	Hfm1	56	60.025	Cricetulus_griseus_chok1gshd
ENSHCOG00000019632	hfm1	97	62.255	ENSCGRG00000017181	Hfm1	57	62.255	Cricetulus_griseus_crigri
ENSHCOG00000019632	hfm1	97	77.737	ENSCSEG00000017659	hfm1	75	77.737	Cynoglossus_semilaevis
ENSHCOG00000019632	hfm1	87	74.079	ENSCVAG00000005075	hfm1	88	74.079	Cyprinodon_variegatus
ENSHCOG00000019632	hfm1	97	71.840	ENSDARG00000104288	hfm1	74	71.840	Danio_rerio
ENSHCOG00000019632	hfm1	96	63.379	ENSDNOG00000004776	HFM1	54	63.379	Dasypus_novemcinctus
ENSHCOG00000019632	hfm1	97	62.545	ENSDORG00000014661	Hfm1	57	62.545	Dipodomys_ordii
ENSHCOG00000019632	hfm1	52	62.264	ENSEBUG00000006133	-	89	62.264	Eptatretus_burgeri
ENSHCOG00000019632	hfm1	95	64.170	ENSEASG00005015424	HFM1	80	64.170	Equus_asinus_asinus
ENSHCOG00000019632	hfm1	97	64.338	ENSECAG00000024039	HFM1	55	64.338	Equus_caballus
ENSHCOG00000019632	hfm1	100	73.349	ENSELUG00000018944	hfm1	97	73.349	Esox_lucius
ENSHCOG00000019632	hfm1	97	64.461	ENSFCAG00000029116	HFM1	56	64.461	Felis_catus
ENSHCOG00000019632	hfm1	97	64.951	ENSFALG00000001781	HFM1	57	64.951	Ficedula_albicollis
ENSHCOG00000019632	hfm1	97	63.882	ENSFDAG00000020816	HFM1	55	63.882	Fukomys_damarensis
ENSHCOG00000019632	hfm1	97	71.075	ENSGMOG00000017436	hfm1	84	71.075	Gadus_morhua
ENSHCOG00000019632	hfm1	100	75.550	ENSGAFG00000018093	hfm1	100	75.203	Gambusia_affinis
ENSHCOG00000019632	hfm1	97	75.866	ENSGACG00000015686	hfm1	84	75.866	Gasterosteus_aculeatus
ENSHCOG00000019632	hfm1	97	64.216	ENSGGOG00000038524	HFM1	57	64.216	Gorilla_gorilla
ENSHCOG00000019632	hfm1	98	77.697	ENSHBUG00000007309	hfm1	78	77.697	Haplochromis_burtoni
ENSHCOG00000019632	hfm1	98	73.140	ENSIPUG00000017020	hfm1	90	73.140	Ictalurus_punctatus
ENSHCOG00000019632	hfm1	97	63.113	ENSJJAG00000017198	Hfm1	58	63.113	Jaculus_jaculus
ENSHCOG00000019632	hfm1	97	78.345	ENSKMAG00000002282	hfm1	84	78.345	Kryptolebias_marmoratus
ENSHCOG00000019632	hfm1	100	82.339	ENSLBEG00000006759	hfm1	98	82.339	Labrus_bergylta
ENSHCOG00000019632	hfm1	97	66.017	ENSLACG00000010698	HFM1	77	66.139	Latimeria_chalumnae
ENSHCOG00000019632	hfm1	97	69.523	ENSLOCG00000004931	hfm1	75	69.523	Lepisosteus_oculatus
ENSHCOG00000019632	hfm1	81	67.064	ENSLAFG00000015903	-	90	67.064	Loxodonta_africana
ENSHCOG00000019632	hfm1	97	61.671	ENSMFAG00000003649	HFM1	57	61.671	Macaca_fascicularis
ENSHCOG00000019632	hfm1	97	63.848	ENSMMUG00000006819	HFM1	57	63.848	Macaca_mulatta
ENSHCOG00000019632	hfm1	100	83.271	ENSMAMG00000004623	hfm1	99	83.271	Mastacembelus_armatus
ENSHCOG00000019632	hfm1	100	80.220	ENSMZEG00005004679	hfm1	99	80.220	Maylandia_zebra
ENSHCOG00000019632	hfm1	89	63.228	ENSMGAG00000008437	HFM1	94	63.228	Meleagris_gallopavo
ENSHCOG00000019632	hfm1	97	62.454	ENSMAUG00000018858	Hfm1	57	62.454	Mesocricetus_auratus
ENSHCOG00000019632	hfm1	97	63.892	ENSMICG00000037935	HFM1	57	63.892	Microcebus_murinus
ENSHCOG00000019632	hfm1	97	62.868	ENSMOCG00000014812	Hfm1	57	62.868	Microtus_ochrogaster
ENSHCOG00000019632	hfm1	100	79.127	ENSMMOG00000006148	hfm1	98	79.127	Mola_mola
ENSHCOG00000019632	hfm1	100	81.123	ENSMALG00000002401	hfm1	99	81.123	Monopterus_albus
ENSHCOG00000019632	hfm1	91	68.750	MGP_CAROLIEiJ_G0027496	Hfm1	52	68.750	Mus_caroli
ENSHCOG00000019632	hfm1	97	62.577	ENSMUSG00000043410	Hfm1	57	62.577	Mus_musculus
ENSHCOG00000019632	hfm1	97	62.577	MGP_PahariEiJ_G0017268	Hfm1	57	62.577	Mus_pahari
ENSHCOG00000019632	hfm1	97	62.945	MGP_SPRETEiJ_G0028495	Hfm1	57	62.945	Mus_spretus
ENSHCOG00000019632	hfm1	97	63.848	ENSMPUG00000004594	HFM1	55	63.848	Mustela_putorius_furo
ENSHCOG00000019632	hfm1	97	64.461	ENSMLUG00000010200	HFM1	56	64.461	Myotis_lucifugus
ENSHCOG00000019632	hfm1	100	80.741	ENSNBRG00000002910	hfm1	99	80.741	Neolamprologus_brichardi
ENSHCOG00000019632	hfm1	97	62.577	ENSNLEG00000010285	HFM1	57	62.577	Nomascus_leucogenys
ENSHCOG00000019632	hfm1	97	59.755	ENSOPRG00000013916	HFM1	57	59.755	Ochotona_princeps
ENSHCOG00000019632	hfm1	97	79.238	ENSONIG00000010590	hfm1	78	79.238	Oreochromis_niloticus
ENSHCOG00000019632	hfm1	97	79.771	ENSORLG00000026844	hfm1	99	79.771	Oryzias_latipes
ENSHCOG00000019632	hfm1	97	68.512	ENSORLG00020002951	hfm1	63	68.512	Oryzias_latipes_hni
ENSHCOG00000019632	hfm1	97	77.027	ENSOMEG00000016474	hfm1	56	77.027	Oryzias_melastigma
ENSHCOG00000019632	hfm1	97	64.015	ENSOGAG00000032369	HFM1	66	64.015	Otolemur_garnettii
ENSHCOG00000019632	hfm1	97	64.338	ENSOARG00000015812	HFM1	57	64.338	Ovis_aries
ENSHCOG00000019632	hfm1	97	64.461	ENSPPAG00000024582	HFM1	61	64.461	Pan_paniscus
ENSHCOG00000019632	hfm1	97	64.461	ENSPPRG00000003270	HFM1	56	64.461	Panthera_pardus
ENSHCOG00000019632	hfm1	97	64.461	ENSPTIG00000018881	HFM1	56	64.461	Panthera_tigris_altaica
ENSHCOG00000019632	hfm1	97	64.338	ENSPTRG00000000948	HFM1	57	64.338	Pan_troglodytes
ENSHCOG00000019632	hfm1	97	63.725	ENSPANG00000009838	HFM1	57	63.725	Papio_anubis
ENSHCOG00000019632	hfm1	99	71.497	ENSPKIG00000003810	hfm1	99	71.497	Paramormyrops_kingsleyae
ENSHCOG00000019632	hfm1	97	79.337	ENSPMGG00000011059	hfm1	98	79.337	Periophthalmus_magnuspinnatus
ENSHCOG00000019632	hfm1	97	62.822	ENSPEMG00000022852	Hfm1	57	62.822	Peromyscus_maniculatus_bairdii
ENSHCOG00000019632	hfm1	97	63.971	ENSPCIG00000014233	HFM1	55	63.971	Phascolarctos_cinereus
ENSHCOG00000019632	hfm1	97	77.273	ENSPFOG00000017194	hfm1	78	77.273	Poecilia_formosa
ENSHCOG00000019632	hfm1	97	77.150	ENSPLAG00000000571	hfm1	74	77.150	Poecilia_latipinna
ENSHCOG00000019632	hfm1	97	77.518	ENSPMEG00000019475	hfm1	75	77.518	Poecilia_mexicana
ENSHCOG00000019632	hfm1	100	75.145	ENSPREG00000007803	hfm1	100	74.797	Poecilia_reticulata
ENSHCOG00000019632	hfm1	97	64.093	ENSPPYG00000001163	HFM1	57	64.093	Pongo_abelii
ENSHCOG00000019632	hfm1	97	59.705	ENSPVAG00000009713	HFM1	58	59.705	Pteropus_vampyrus
ENSHCOG00000019632	hfm1	100	80.000	ENSPNYG00000001795	hfm1	99	80.000	Pundamilia_nyererei
ENSHCOG00000019632	hfm1	98	75.157	ENSPNAG00000010865	hfm1	81	75.157	Pygocentrus_nattereri
ENSHCOG00000019632	hfm1	97	62.454	ENSRNOG00000023299	Hfm1	57	62.454	Rattus_norvegicus
ENSHCOG00000019632	hfm1	99	63.038	ENSRROG00000045569	HFM1	58	63.038	Rhinopithecus_roxellana
ENSHCOG00000019632	hfm1	97	63.480	ENSSBOG00000027456	HFM1	58	63.480	Saimiri_boliviensis_boliviensis
ENSHCOG00000019632	hfm1	71	65.541	ENSSHAG00000014616	-	67	65.541	Sarcophilus_harrisii
ENSHCOG00000019632	hfm1	97	72.025	ENSSFOG00015020129	hfm1	54	72.025	Scleropages_formosus
ENSHCOG00000019632	hfm1	97	79.365	ENSSMAG00000006907	hfm1	80	79.365	Scophthalmus_maximus
ENSHCOG00000019632	hfm1	100	79.741	ENSSDUG00000011424	hfm1	99	79.741	Seriola_dumerili
ENSHCOG00000019632	hfm1	100	78.605	ENSSLDG00000016386	hfm1	99	78.605	Seriola_lalandi_dorsalis
ENSHCOG00000019632	hfm1	100	80.330	ENSSPAG00000001023	hfm1	99	80.330	Stegastes_partitus
ENSHCOG00000019632	hfm1	97	64.461	ENSSSCG00000006912	HFM1	59	64.461	Sus_scrofa
ENSHCOG00000019632	hfm1	97	64.583	ENSTGUG00000006172	HFM1	85	64.583	Taeniopygia_guttata
ENSHCOG00000019632	hfm1	58	81.210	ENSTNIG00000006962	hfm1	95	81.210	Tetraodon_nigroviridis
ENSHCOG00000019632	hfm1	97	64.216	ENSTTRG00000013933	HFM1	58	64.216	Tursiops_truncatus
ENSHCOG00000019632	hfm1	97	61.765	ENSVPAG00000011331	HFM1	57	61.765	Vicugna_pacos
ENSHCOG00000019632	hfm1	95	63.750	ENSVVUG00000020760	HFM1	80	63.750	Vulpes_vulpes
ENSHCOG00000019632	hfm1	98	80.202	ENSXMAG00000004178	hfm1	91	80.202	Xiphophorus_maculatus