EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000019694 (Gene tree)
Gene ID: 109523950
Gene Symbol: eif3c
Alias: eif3s8|fi37c04|wu:fb34a08|wu:fi37c04|zgc:66128
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 11018 bases
Position: chrKV880215.1:1116729-1127746
Accession: 109523950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015991	eIF-3c_N	PF05470.12	3.9e-251	1	1
ENSHCOP00000027677	eIF-3c_N	PF05470.12	3.9e-251	1	1
ENSHCOP00000027684	eIF-3c_N	PF05470.12	3.9e-251	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000028288	-	5161	XM_019883465	ENSHCOP00000015991	926 (aa)	XP_019739024	UPI00094E60FC
ENSHCOT00000028295	-	5161	-	ENSHCOP00000027684	926 (aa)	-	UPI00094E60FC
ENSHCOT00000024056	-	5161	-	ENSHCOP00000027677	926 (aa)	-	UPI00094E60FC

Gene Model

Click here to download ENSHCOG00000019694's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019694's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019694	eif3c	98	75.682	ENSG00000184110	EIF3C	100	84.810	Homo_sapiens
ENSHCOG00000019694	eif3c	98	75.679	ENSG00000205609	EIF3CL	99	75.054	Homo_sapiens
ENSHCOG00000019694	eif3c	100	91.935	ENSAPOG00000024092	eif3c	100	91.183	Acanthochromis_polyacanthus
ENSHCOG00000019694	eif3c	98	75.791	ENSAMEG00000015454	-	99	76.004	Ailuropoda_melanoleuca
ENSHCOG00000019694	eif3c	100	82.070	ENSACIG00000015082	eif3c	100	81.110	Amphilophus_citrinellus
ENSHCOG00000019694	eif3c	100	92.581	ENSAOCG00000021466	eif3c	100	91.398	Amphiprion_ocellaris
ENSHCOG00000019694	eif3c	100	92.581	ENSAPEG00000010521	eif3c	100	91.398	Amphiprion_percula
ENSHCOG00000019694	eif3c	100	91.944	ENSATEG00000019001	eif3c	100	90.763	Anabas_testudineus
ENSHCOG00000019694	eif3c	100	77.039	ENSACAG00000005937	-	100	76.931	Anolis_carolinensis
ENSHCOG00000019694	eif3c	98	75.573	ENSANAG00000020640	-	99	75.244	Aotus_nancymaae
ENSHCOG00000019694	eif3c	100	79.548	ENSACLG00000009347	eif3c	95	95.625	Astatotilapia_calliptera
ENSHCOG00000019694	eif3c	85	88.622	ENSACLG00000009322	eif3c	92	88.622	Astatotilapia_calliptera
ENSHCOG00000019694	eif3c	100	83.262	ENSAMXG00000020949	eif3c	100	84.064	Astyanax_mexicanus
ENSHCOG00000019694	eif3c	98	75.463	ENSBTAG00000006543	EIF3CL	99	75.461	Bos_taurus
ENSHCOG00000019694	eif3c	96	42.574	WBGene00001226	eif-3.C	67	45.728	Caenorhabditis_elegans
ENSHCOG00000019694	eif3c	98	75.463	ENSCJAG00000006341	-	98	77.808	Callithrix_jacchus
ENSHCOG00000019694	eif3c	98	75.791	ENSCAFG00000017143	-	99	76.004	Canis_familiaris
ENSHCOG00000019694	eif3c	98	75.791	ENSCAFG00020017587	-	99	76.004	Canis_lupus_dingo
ENSHCOG00000019694	eif3c	98	75.463	ENSCHIG00000024795	-	99	75.353	Capra_hircus
ENSHCOG00000019694	eif3c	98	75.354	ENSTSYG00000003486	-	99	75.570	Carlito_syrichta
ENSHCOG00000019694	eif3c	95	69.126	ENSCAPG00000015887	-	99	69.300	Cavia_aperea
ENSHCOG00000019694	eif3c	98	75.791	ENSCPOG00000007533	-	99	76.004	Cavia_porcellus
ENSHCOG00000019694	eif3c	97	63.987	ENSCCAG00000029099	-	98	64.136	Cebus_capucinus
ENSHCOG00000019694	eif3c	98	75.218	ENSCCAG00000034928	-	99	74.783	Cebus_capucinus
ENSHCOG00000019694	eif3c	98	71.429	ENSCCAG00000027724	-	99	70.358	Cebus_capucinus
ENSHCOG00000019694	eif3c	97	76.211	ENSCATG00000032673	-	99	75.877	Cercocebus_atys
ENSHCOG00000019694	eif3c	98	75.682	ENSCLAG00000011094	-	99	75.682	Chinchilla_lanigera
ENSHCOG00000019694	eif3c	97	76.211	ENSCSAG00000006297	-	99	75.877	Chlorocebus_sabaeus
ENSHCOG00000019694	eif3c	52	66.667	ENSCHOG00000003120	-	85	66.409	Choloepus_hoffmanni
ENSHCOG00000019694	eif3c	66	85.231	ENSCPBG00000012407	-	94	72.523	Chrysemys_picta_bellii
ENSHCOG00000019694	eif3c	76	54.701	ENSCSAVG00000006744	-	93	55.088	Ciona_savignyi
ENSHCOG00000019694	eif3c	97	76.211	ENSCANG00000033626	-	99	75.877	Colobus_angolensis_palliatus
ENSHCOG00000019694	eif3c	98	75.655	ENSCGRG00001015265	EIF3C	99	75.543	Cricetulus_griseus_chok1gshd
ENSHCOG00000019694	eif3c	100	88.901	ENSCSEG00000017770	eif3c	100	88.793	Cynoglossus_semilaevis
ENSHCOG00000019694	eif3c	100	87.931	ENSCVAG00000005402	eif3c	100	88.254	Cyprinodon_variegatus
ENSHCOG00000019694	eif3c	100	86.037	ENSDARG00000016443	eif3c	100	86.037	Danio_rerio
ENSHCOG00000019694	eif3c	98	75.573	ENSDNOG00000031497	-	99	75.679	Dasypus_novemcinctus
ENSHCOG00000019694	eif3c	98	75.463	ENSDORG00000016471	Eif3c	99	75.787	Dipodomys_ordii
ENSHCOG00000019694	eif3c	96	51.844	FBgn0034258	eIF3c	97	51.173	Drosophila_melanogaster
ENSHCOG00000019694	eif3c	90	84.404	ENSETEG00000013527	-	91	84.404	Echinops_telfairi
ENSHCOG00000019694	eif3c	98	64.819	ENSEBUG00000001629	eif3c	99	63.782	Eptatretus_burgeri
ENSHCOG00000019694	eif3c	98	75.682	ENSECAG00000008746	-	99	75.679	Equus_caballus
ENSHCOG00000019694	eif3c	86	76.904	ENSEEUG00000006148	-	99	76.273	Erinaceus_europaeus
ENSHCOG00000019694	eif3c	62	55.070	ENSEEUG00000000726	-	64	54.422	Erinaceus_europaeus
ENSHCOG00000019694	eif3c	100	83.741	ENSELUG00000022257	eif3c	92	95.031	Esox_lucius
ENSHCOG00000019694	eif3c	98	75.900	ENSFCAG00000015782	-	99	76.113	Felis_catus
ENSHCOG00000019694	eif3c	98	75.900	ENSFDAG00000003588	-	99	76.253	Fukomys_damarensis
ENSHCOG00000019694	eif3c	100	88.292	ENSFHEG00000014154	EIF3C	100	87.325	Fundulus_heteroclitus
ENSHCOG00000019694	eif3c	96	85.955	ENSGMOG00000016885	eif3c	100	86.854	Gadus_morhua
ENSHCOG00000019694	eif3c	95	88.876	ENSGACG00000007652	eif3c	100	86.975	Gasterosteus_aculeatus
ENSHCOG00000019694	eif3c	93	73.721	ENSGAGG00000006666	-	100	74.302	Gopherus_agassizii
ENSHCOG00000019694	eif3c	98	74.345	ENSGGOG00000026919	EIF3C	99	75.847	Gorilla_gorilla
ENSHCOG00000019694	eif3c	98	75.573	ENSHGLG00000011445	EIF3C	99	76.035	Heterocephalus_glaber_female
ENSHCOG00000019694	eif3c	98	75.573	ENSHGLG00100000217	EIF3C	99	76.035	Heterocephalus_glaber_male
ENSHCOG00000019694	eif3c	99	84.047	ENSIPUG00000016878	eif3c	99	84.475	Ictalurus_punctatus
ENSHCOG00000019694	eif3c	98	76.118	ENSSTOG00000021278	-	99	75.570	Ictidomys_tridecemlineatus
ENSHCOG00000019694	eif3c	98	74.482	ENSJJAG00000012722	Eif3c	99	74.810	Jaculus_jaculus
ENSHCOG00000019694	eif3c	100	87.566	ENSKMAG00000021662	eif3c	100	87.872	Kryptolebias_marmoratus
ENSHCOG00000019694	eif3c	100	89.105	ENSLBEG00000023370	eif3c	100	89.009	Labrus_bergylta
ENSHCOG00000019694	eif3c	97	78.889	ENSLACG00000000770	eif3c	99	78.219	Latimeria_chalumnae
ENSHCOG00000019694	eif3c	98	75.354	ENSLAFG00000027426	-	99	75.461	Loxodonta_africana
ENSHCOG00000019694	eif3c	97	76.211	ENSMFAG00000041930	-	99	75.877	Macaca_fascicularis
ENSHCOG00000019694	eif3c	97	76.211	ENSMMUG00000011798	-	99	75.877	Macaca_mulatta
ENSHCOG00000019694	eif3c	97	76.211	ENSMNEG00000023915	-	99	75.877	Macaca_nemestrina
ENSHCOG00000019694	eif3c	97	76.211	ENSMLEG00000027529	-	99	75.877	Mandrillus_leucophaeus
ENSHCOG00000019694	eif3c	100	91.398	ENSMAMG00000012512	eif3c	100	89.892	Mastacembelus_armatus
ENSHCOG00000019694	eif3c	100	79.482	ENSMZEG00005013699	eif3c	94	95.625	Maylandia_zebra
ENSHCOG00000019694	eif3c	85	92.500	ENSMZEG00005013685	eif3c	92	88.462	Maylandia_zebra
ENSHCOG00000019694	eif3c	98	75.328	ENSMAUG00000010621	Eif3c	99	75.543	Mesocricetus_auratus
ENSHCOG00000019694	eif3c	98	75.791	ENSMICG00000036748	-	99	76.004	Microcebus_murinus
ENSHCOG00000019694	eif3c	98	74.236	ENSMOCG00000004204	Eif3c	99	74.130	Microtus_ochrogaster
ENSHCOG00000019694	eif3c	100	80.130	ENSMMOG00000001572	eif3c	100	79.827	Mola_mola
ENSHCOG00000019694	eif3c	100	75.510	ENSMODG00000015579	-	99	74.866	Monodelphis_domestica
ENSHCOG00000019694	eif3c	92	94.340	ENSMALG00000008907	eif3c	93	94.410	Monopterus_albus
ENSHCOG00000019694	eif3c	98	75.109	MGP_CAROLIEiJ_G0030451	Eif3c	99	75.109	Mus_caroli
ENSHCOG00000019694	eif3c	98	75.109	ENSMUSG00000030738	Eif3c	99	75.109	Mus_musculus
ENSHCOG00000019694	eif3c	98	74.782	MGP_PahariEiJ_G0013661	Eif3c	99	74.783	Mus_pahari
ENSHCOG00000019694	eif3c	98	75.109	MGP_SPRETEiJ_G0031565	Eif3c	99	75.109	Mus_spretus
ENSHCOG00000019694	eif3c	95	76.357	ENSMPUG00000012732	-	99	76.637	Mustela_putorius_furo
ENSHCOG00000019694	eif3c	98	75.543	ENSMLUG00000015558	-	99	75.353	Myotis_lucifugus
ENSHCOG00000019694	eif3c	98	75.573	ENSNGAG00000007177	-	99	75.896	Nannospalax_galili
ENSHCOG00000019694	eif3c	72	64.262	ENSNGAG00000010901	-	75	64.638	Nannospalax_galili
ENSHCOG00000019694	eif3c	98	65.297	ENSNLEG00000001425	-	99	63.940	Nomascus_leucogenys
ENSHCOG00000019694	eif3c	87	57.042	ENSMEUG00000005317	-	93	61.207	Notamacropus_eugenii
ENSHCOG00000019694	eif3c	100	62.406	ENSMEUG00000009939	-	99	62.728	Notamacropus_eugenii
ENSHCOG00000019694	eif3c	98	75.136	ENSOPRG00000000931	-	99	75.435	Ochotona_princeps
ENSHCOG00000019694	eif3c	99	75.952	ENSODEG00000013508	-	99	76.113	Octodon_degus
ENSHCOG00000019694	eif3c	67	68.480	ENSONIG00000011434	eif3c	100	68.328	Oreochromis_niloticus
ENSHCOG00000019694	eif3c	100	72.252	ENSOANG00000011410	-	99	72.718	Ornithorhynchus_anatinus
ENSHCOG00000019694	eif3c	98	75.573	ENSOCUG00000022489	-	99	75.896	Oryctolagus_cuniculus
ENSHCOG00000019694	eif3c	97	86.778	ENSORLG00000006318	eif3c	97	86.609	Oryzias_latipes
ENSHCOG00000019694	eif3c	97	86.778	ENSORLG00020015713	eif3c	100	85.307	Oryzias_latipes_hni
ENSHCOG00000019694	eif3c	97	86.556	ENSORLG00015013772	eif3c	100	85.714	Oryzias_latipes_hsok
ENSHCOG00000019694	eif3c	100	87.729	ENSOMEG00000020450	eif3c	100	86.868	Oryzias_melastigma
ENSHCOG00000019694	eif3c	98	75.791	ENSOGAG00000012737	-	99	76.004	Otolemur_garnettii
ENSHCOG00000019694	eif3c	98	75.463	ENSOARG00000002892	-	99	75.353	Ovis_aries
ENSHCOG00000019694	eif3c	98	75.900	ENSPPRG00000012336	-	99	76.113	Panthera_pardus
ENSHCOG00000019694	eif3c	98	75.900	ENSPTIG00000011712	-	99	76.113	Panthera_tigris_altaica
ENSHCOG00000019694	eif3c	97	76.211	ENSPANG00000021151	-	99	75.877	Papio_anubis
ENSHCOG00000019694	eif3c	100	85.348	ENSPKIG00000002049	eif3c	100	85.011	Paramormyrops_kingsleyae
ENSHCOG00000019694	eif3c	89	92.045	ENSPMGG00000005409	eif3c	100	81.317	Periophthalmus_magnuspinnatus
ENSHCOG00000019694	eif3c	98	75.218	ENSPEMG00000010899	Eif3c	99	74.809	Peromyscus_maniculatus_bairdii
ENSHCOG00000019694	eif3c	100	74.866	ENSPCIG00000025206	-	99	75.459	Phascolarctos_cinereus
ENSHCOG00000019694	eif3c	100	89.247	ENSPFOG00000004476	eif3c	100	88.065	Poecilia_formosa
ENSHCOG00000019694	eif3c	93	88.618	ENSPLAG00000017480	eif3c	96	95.625	Poecilia_latipinna
ENSHCOG00000019694	eif3c	100	89.236	ENSPMEG00000019512	eif3c	100	88.052	Poecilia_mexicana
ENSHCOG00000019694	eif3c	98	73.581	ENSPPYG00000007227	-	99	73.261	Pongo_abelii
ENSHCOG00000019694	eif3c	65	82.196	ENSPCAG00000012710	-	99	82.196	Procavia_capensis
ENSHCOG00000019694	eif3c	98	75.791	ENSPCOG00000019289	-	93	82.951	Propithecus_coquereli
ENSHCOG00000019694	eif3c	98	76.009	ENSPVAG00000005804	-	99	76.221	Pteropus_vampyrus
ENSHCOG00000019694	eif3c	51	92.500	ENSPNYG00000016530	eif3c	82	87.195	Pundamilia_nyererei
ENSHCOG00000019694	eif3c	100	84.962	ENSPNAG00000024040	eif3c	100	84.962	Pygocentrus_nattereri
ENSHCOG00000019694	eif3c	98	75.109	ENSRNOG00000018761	Eif3c	99	75.109	Rattus_norvegicus
ENSHCOG00000019694	eif3c	97	75.055	ENSRBIG00000044009	-	98	73.696	Rhinopithecus_bieti
ENSHCOG00000019694	eif3c	97	76.211	ENSRROG00000043626	-	99	75.877	Rhinopithecus_roxellana
ENSHCOG00000019694	eif3c	74	30.466	YMR309C	-	81	30.645	Saccharomyces_cerevisiae
ENSHCOG00000019694	eif3c	98	75.573	ENSSBOG00000032155	-	99	75.244	Saimiri_boliviensis_boliviensis
ENSHCOG00000019694	eif3c	96	75.278	ENSSHAG00000011808	-	99	75.111	Sarcophilus_harrisii
ENSHCOG00000019694	eif3c	100	85.145	ENSSFOG00015021823	eif3c	100	85.253	Scleropages_formosus
ENSHCOG00000019694	eif3c	98	87.899	ENSSMAG00000016638	eif3c	97	89.628	Scophthalmus_maximus
ENSHCOG00000019694	eif3c	100	90.743	ENSSDUG00000023117	eif3c	100	91.173	Seriola_dumerili
ENSHCOG00000019694	eif3c	100	90.743	ENSSLDG00000009706	eif3c	100	91.173	Seriola_lalandi_dorsalis
ENSHCOG00000019694	eif3c	100	74.651	ENSSPUG00000016470	-	100	74.758	Sphenodon_punctatus
ENSHCOG00000019694	eif3c	100	91.398	ENSSPAG00000000426	eif3c	100	90.108	Stegastes_partitus
ENSHCOG00000019694	eif3c	98	75.791	ENSSSCG00000034927	-	99	76.004	Sus_scrofa
ENSHCOG00000019694	eif3c	99	89.514	ENSTRUG00000008951	eif3c	99	89.189	Takifugu_rubripes
ENSHCOG00000019694	eif3c	100	86.853	ENSTNIG00000015210	eif3c	100	86.422	Tetraodon_nigroviridis
ENSHCOG00000019694	eif3c	98	75.791	ENSTTRG00000005880	-	99	76.004	Tursiops_truncatus
ENSHCOG00000019694	eif3c	66	82.815	ENSUAMG00000001127	-	91	92.038	Ursus_americanus
ENSHCOG00000019694	eif3c	98	75.791	ENSUMAG00000010927	-	99	76.004	Ursus_maritimus
ENSHCOG00000019694	eif3c	98	74.591	ENSVVUG00000025970	-	99	74.701	Vulpes_vulpes
ENSHCOG00000019694	eif3c	100	76.521	ENSXETG00000002941	eif3c	100	75.987	Xenopus_tropicalis
ENSHCOG00000019694	eif3c	100	88.568	ENSXMAG00000013796	eif3c	100	87.460	Xiphophorus_maculatus