EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000019848 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-275j6.5
Alias: gb:ct586343
Full Name: chromosome unknown C12orf65 homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 5122 bases
Position: chrKV880238.1:1141847-1146968
Accession: 109525349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000016127	RF-1	PF00472.20	4.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000024218	-	513	XM_019885785	ENSHCOP00000016127	170 (aa)	XP_019741344	-

Gene Model

Click here to download ENSHCOG00000019848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019848	si:ch211-275j6.5	85	58.621	ENSG00000130921	C12orf65	91	60.145	Homo_sapiens
ENSHCOG00000019848	si:ch211-275j6.5	89	71.053	ENSAPOG00000000995	si:ch211-275j6.5	92	71.053	Acanthochromis_polyacanthus
ENSHCOG00000019848	si:ch211-275j6.5	89	68.212	ENSACIG00000001644	si:ch211-275j6.5	94	68.212	Amphilophus_citrinellus
ENSHCOG00000019848	si:ch211-275j6.5	95	70.186	ENSAOCG00000005589	si:ch211-275j6.5	95	73.026	Amphiprion_ocellaris
ENSHCOG00000019848	si:ch211-275j6.5	89	72.368	ENSAPEG00000024618	si:ch211-275j6.5	91	72.368	Amphiprion_percula
ENSHCOG00000019848	si:ch211-275j6.5	94	63.125	ENSATEG00000011661	si:ch211-275j6.5	85	63.125	Anabas_testudineus
ENSHCOG00000019848	si:ch211-275j6.5	69	72.881	ENSAPLG00000016073	C12orf65	98	72.881	Anas_platyrhynchos
ENSHCOG00000019848	si:ch211-275j6.5	87	61.184	ENSACAG00000015561	C12orf65	76	61.184	Anolis_carolinensis
ENSHCOG00000019848	si:ch211-275j6.5	75	59.843	ENSANAG00000022881	C12orf65	88	58.599	Aotus_nancymaae
ENSHCOG00000019848	si:ch211-275j6.5	100	62.941	ENSACLG00000023906	si:ch211-275j6.5	100	62.941	Astatotilapia_calliptera
ENSHCOG00000019848	si:ch211-275j6.5	69	67.797	ENSAMXG00000031765	si:ch211-275j6.5	80	66.412	Astyanax_mexicanus
ENSHCOG00000019848	si:ch211-275j6.5	99	54.706	ENSBTAG00000020503	C17H12orf65	91	54.706	Bos_taurus
ENSHCOG00000019848	si:ch211-275j6.5	75	56.923	ENSCJAG00000016579	C12orf65	88	56.250	Callithrix_jacchus
ENSHCOG00000019848	si:ch211-275j6.5	75	63.281	ENSCAFG00000007512	C26H12orf65	59	63.571	Canis_familiaris
ENSHCOG00000019848	si:ch211-275j6.5	75	63.281	ENSCAFG00020016169	C12orf65	84	63.571	Canis_lupus_dingo
ENSHCOG00000019848	si:ch211-275j6.5	77	62.595	ENSCHIG00000022229	C12orf65	74	62.595	Capra_hircus
ENSHCOG00000019848	si:ch211-275j6.5	57	70.408	ENSCAPG00000014691	C12orf65	74	63.971	Cavia_aperea
ENSHCOG00000019848	si:ch211-275j6.5	58	70.707	ENSCPOG00000007583	C12orf65	74	64.234	Cavia_porcellus
ENSHCOG00000019848	si:ch211-275j6.5	62	67.619	ENSCATG00000040685	C12orf65	76	63.704	Cercocebus_atys
ENSHCOG00000019848	si:ch211-275j6.5	66	62.832	ENSCLAG00000014329	C12orf65	74	62.319	Chinchilla_lanigera
ENSHCOG00000019848	si:ch211-275j6.5	55	73.404	ENSCSAG00000002068	C12orf65	75	63.704	Chlorocebus_sabaeus
ENSHCOG00000019848	si:ch211-275j6.5	68	71.304	ENSCPBG00000025970	C12orf65	70	71.304	Chrysemys_picta_bellii
ENSHCOG00000019848	si:ch211-275j6.5	55	70.213	ENSCGRG00001013424	2810006K23Rik	79	56.051	Cricetulus_griseus_chok1gshd
ENSHCOG00000019848	si:ch211-275j6.5	55	70.213	ENSCGRG00000003037	2810006K23Rik	79	56.051	Cricetulus_griseus_crigri
ENSHCOG00000019848	si:ch211-275j6.5	93	57.143	ENSCSEG00000014536	si:ch211-275j6.5	94	57.143	Cynoglossus_semilaevis
ENSHCOG00000019848	si:ch211-275j6.5	81	72.464	ENSCVAG00000023000	si:ch211-275j6.5	79	72.464	Cyprinodon_variegatus
ENSHCOG00000019848	si:ch211-275j6.5	79	66.418	ENSDARG00000097803	si:ch211-275j6.5	98	66.418	Danio_rerio
ENSHCOG00000019848	si:ch211-275j6.5	74	54.762	ENSDNOG00000034728	C12orf65	90	54.667	Dasypus_novemcinctus
ENSHCOG00000019848	si:ch211-275j6.5	69	62.810	ENSDORG00000026069	2810006K23Rik	78	61.111	Dipodomys_ordii
ENSHCOG00000019848	si:ch211-275j6.5	66	48.673	FBgn0050100	CG30100	77	48.673	Drosophila_melanogaster
ENSHCOG00000019848	si:ch211-275j6.5	51	74.713	ENSETEG00000005627	C12orf65	74	68.067	Echinops_telfairi
ENSHCOG00000019848	si:ch211-275j6.5	74	59.542	ENSEASG00005012587	C12orf65	91	57.055	Equus_asinus_asinus
ENSHCOG00000019848	si:ch211-275j6.5	75	59.398	ENSECAG00000001057	C8H12orf65	91	57.669	Equus_caballus
ENSHCOG00000019848	si:ch211-275j6.5	55	73.469	ENSEEUG00000007231	C12orf65	78	66.154	Erinaceus_europaeus
ENSHCOG00000019848	si:ch211-275j6.5	75	69.531	ENSELUG00000015178	lg13h12orf65	77	69.531	Esox_lucius
ENSHCOG00000019848	si:ch211-275j6.5	54	69.892	ENSFCAG00000015328	C12orf65	75	64.800	Felis_catus
ENSHCOG00000019848	si:ch211-275j6.5	58	75.510	ENSFALG00000009261	C12orf65	77	67.460	Ficedula_albicollis
ENSHCOG00000019848	si:ch211-275j6.5	89	69.737	ENSFHEG00000017567	si:ch211-275j6.5	89	69.737	Fundulus_heteroclitus
ENSHCOG00000019848	si:ch211-275j6.5	78	63.910	ENSGMOG00000012139	si:ch211-275j6.5	90	63.910	Gadus_morhua
ENSHCOG00000019848	si:ch211-275j6.5	72	68.852	ENSGALG00000029390	C15H12ORF65	73	70.000	Gallus_gallus
ENSHCOG00000019848	si:ch211-275j6.5	89	68.421	ENSGACG00000008255	si:ch211-275j6.5	95	68.421	Gasterosteus_aculeatus
ENSHCOG00000019848	si:ch211-275j6.5	56	74.737	ENSGAGG00000000823	C12orf65	76	71.171	Gopherus_agassizii
ENSHCOG00000019848	si:ch211-275j6.5	85	58.621	ENSGGOG00000012850	C12orf65	87	59.236	Gorilla_gorilla
ENSHCOG00000019848	si:ch211-275j6.5	100	62.941	ENSHBUG00000007273	si:ch211-275j6.5	100	62.941	Haplochromis_burtoni
ENSHCOG00000019848	si:ch211-275j6.5	62	66.981	ENSHGLG00000010966	C12orf65	73	63.971	Heterocephalus_glaber_female
ENSHCOG00000019848	si:ch211-275j6.5	62	66.981	ENSHGLG00100018631	C12orf65	73	63.971	Heterocephalus_glaber_male
ENSHCOG00000019848	si:ch211-275j6.5	76	66.667	ENSIPUG00000020793	si:ch211-275j6.5	79	66.667	Ictalurus_punctatus
ENSHCOG00000019848	si:ch211-275j6.5	85	58.621	ENSSTOG00000016463	C12orf65	83	58.599	Ictidomys_tridecemlineatus
ENSHCOG00000019848	si:ch211-275j6.5	80	58.088	ENSJJAG00000023360	2810006K23Rik	73	58.088	Jaculus_jaculus
ENSHCOG00000019848	si:ch211-275j6.5	82	74.286	ENSKMAG00000018733	si:ch211-275j6.5	86	74.286	Kryptolebias_marmoratus
ENSHCOG00000019848	si:ch211-275j6.5	75	69.531	ENSLACG00000017355	C12orf65	78	69.531	Latimeria_chalumnae
ENSHCOG00000019848	si:ch211-275j6.5	71	68.595	ENSLOCG00000005702	si:ch211-275j6.5	100	68.595	Lepisosteus_oculatus
ENSHCOG00000019848	si:ch211-275j6.5	69	66.949	ENSLAFG00000002134	C12orf65	71	66.949	Loxodonta_africana
ENSHCOG00000019848	si:ch211-275j6.5	62	67.619	ENSMMUG00000031495	C12orf65	76	63.704	Macaca_mulatta
ENSHCOG00000019848	si:ch211-275j6.5	62	67.619	ENSMNEG00000044673	C12orf65	76	62.963	Macaca_nemestrina
ENSHCOG00000019848	si:ch211-275j6.5	62	67.619	ENSMLEG00000044309	C12orf65	76	63.704	Mandrillus_leucophaeus
ENSHCOG00000019848	si:ch211-275j6.5	90	67.320	ENSMAMG00000017366	si:ch211-275j6.5	90	67.320	Mastacembelus_armatus
ENSHCOG00000019848	si:ch211-275j6.5	100	62.941	ENSMZEG00005000938	si:ch211-275j6.5	99	62.941	Maylandia_zebra
ENSHCOG00000019848	si:ch211-275j6.5	69	71.186	ENSMGAG00000003354	C12orf65	87	71.186	Meleagris_gallopavo
ENSHCOG00000019848	si:ch211-275j6.5	64	63.303	ENSMAUG00000010304	2810006K23Rik	78	63.303	Mesocricetus_auratus
ENSHCOG00000019848	si:ch211-275j6.5	75	58.015	ENSMICG00000037138	C12orf65	90	58.228	Microcebus_murinus
ENSHCOG00000019848	si:ch211-275j6.5	60	68.627	ENSMOCG00000017477	2810006K23Rik	74	62.774	Microtus_ochrogaster
ENSHCOG00000019848	si:ch211-275j6.5	86	68.027	ENSMMOG00000017134	si:ch211-275j6.5	85	68.027	Mola_mola
ENSHCOG00000019848	si:ch211-275j6.5	72	64.228	ENSMODG00000012450	C12orf65	92	55.000	Monodelphis_domestica
ENSHCOG00000019848	si:ch211-275j6.5	78	74.242	ENSMALG00000012291	si:ch211-275j6.5	100	61.765	Monopterus_albus
ENSHCOG00000019848	si:ch211-275j6.5	55	70.213	MGP_CAROLIEiJ_G0027747	2810006K23Rik	67	64.516	Mus_caroli
ENSHCOG00000019848	si:ch211-275j6.5	55	70.213	ENSMUSG00000047635	2810006K23Rik	67	64.516	Mus_musculus
ENSHCOG00000019848	si:ch211-275j6.5	55	71.277	MGP_SPRETEiJ_G0028745	2810006K23Rik	67	65.323	Mus_spretus
ENSHCOG00000019848	si:ch211-275j6.5	82	57.343	ENSMPUG00000001679	C12orf65	91	57.233	Mustela_putorius_furo
ENSHCOG00000019848	si:ch211-275j6.5	92	57.325	ENSMLUG00000007001	C12orf65	88	57.325	Myotis_lucifugus
ENSHCOG00000019848	si:ch211-275j6.5	73	67.742	ENSNGAG00000010625	2810006K23Rik	69	67.742	Nannospalax_galili
ENSHCOG00000019848	si:ch211-275j6.5	100	62.941	ENSNBRG00000008082	si:ch211-275j6.5	100	62.941	Neolamprologus_brichardi
ENSHCOG00000019848	si:ch211-275j6.5	85	58.621	ENSNLEG00000001470	C12orf65	87	59.236	Nomascus_leucogenys
ENSHCOG00000019848	si:ch211-275j6.5	89	60.526	ENSMEUG00000009430	C12orf65	94	60.526	Notamacropus_eugenii
ENSHCOG00000019848	si:ch211-275j6.5	92	54.140	ENSOPRG00000011029	C12orf65	90	54.140	Ochotona_princeps
ENSHCOG00000019848	si:ch211-275j6.5	80	59.124	ENSODEG00000011382	-	87	54.605	Octodon_degus
ENSHCOG00000019848	si:ch211-275j6.5	78	74.436	ENSONIG00000013298	si:ch211-275j6.5	80	74.436	Oreochromis_niloticus
ENSHCOG00000019848	si:ch211-275j6.5	88	58.940	ENSOANG00000012866	C12orf65	79	61.594	Ornithorhynchus_anatinus
ENSHCOG00000019848	si:ch211-275j6.5	65	64.545	ENSOCUG00000011888	C12orf65	74	64.545	Oryctolagus_cuniculus
ENSHCOG00000019848	si:ch211-275j6.5	87	68.919	ENSORLG00000006153	si:ch211-275j6.5	88	68.919	Oryzias_latipes
ENSHCOG00000019848	si:ch211-275j6.5	87	68.919	ENSORLG00020017188	si:ch211-275j6.5	88	68.919	Oryzias_latipes_hni
ENSHCOG00000019848	si:ch211-275j6.5	87	68.919	ENSORLG00015005780	c9h12orf65	88	68.919	Oryzias_latipes_hsok
ENSHCOG00000019848	si:ch211-275j6.5	89	69.737	ENSOMEG00000001663	si:ch211-275j6.5	90	69.737	Oryzias_melastigma
ENSHCOG00000019848	si:ch211-275j6.5	62	63.208	ENSOGAG00000010778	C12orf65	77	61.481	Otolemur_garnettii
ENSHCOG00000019848	si:ch211-275j6.5	77	61.069	ENSOARG00000005214	C12orf65	78	61.069	Ovis_aries
ENSHCOG00000019848	si:ch211-275j6.5	85	58.621	ENSPPAG00000029654	C12orf65	87	59.236	Pan_paniscus
ENSHCOG00000019848	si:ch211-275j6.5	73	66.400	ENSPPRG00000024772	C12orf65	75	66.400	Panthera_pardus
ENSHCOG00000019848	si:ch211-275j6.5	81	61.871	ENSPTIG00000011744	C12orf65	83	61.871	Panthera_tigris_altaica
ENSHCOG00000019848	si:ch211-275j6.5	85	58.621	ENSPTRG00000005595	C12H12orf65	87	59.236	Pan_troglodytes
ENSHCOG00000019848	si:ch211-275j6.5	62	67.619	ENSPANG00000015388	C12orf65	76	63.704	Papio_anubis
ENSHCOG00000019848	si:ch211-275j6.5	88	63.333	ENSPKIG00000001571	si:ch211-275j6.5	89	63.333	Paramormyrops_kingsleyae
ENSHCOG00000019848	si:ch211-275j6.5	86	63.265	ENSPSIG00000013010	C12orf65	79	63.265	Pelodiscus_sinensis
ENSHCOG00000019848	si:ch211-275j6.5	76	71.318	ENSPMGG00000018342	si:ch211-275j6.5	76	71.318	Periophthalmus_magnuspinnatus
ENSHCOG00000019848	si:ch211-275j6.5	60	57.843	ENSPMAG00000000514	si:ch211-275j6.5	92	57.843	Petromyzon_marinus
ENSHCOG00000019848	si:ch211-275j6.5	89	55.975	ENSPCIG00000010996	C12orf65	91	56.329	Phascolarctos_cinereus
ENSHCOG00000019848	si:ch211-275j6.5	89	67.763	ENSPLAG00000001661	si:ch211-275j6.5	89	67.763	Poecilia_latipinna
ENSHCOG00000019848	si:ch211-275j6.5	89	68.212	ENSPMEG00000018566	si:ch211-275j6.5	89	68.212	Poecilia_mexicana
ENSHCOG00000019848	si:ch211-275j6.5	89	68.212	ENSPMEG00000009201	si:ch211-275j6.5	89	68.212	Poecilia_mexicana
ENSHCOG00000019848	si:ch211-275j6.5	76	72.868	ENSPREG00000021268	si:ch211-275j6.5	86	67.808	Poecilia_reticulata
ENSHCOG00000019848	si:ch211-275j6.5	75	61.417	ENSPPYG00000005082	C12orf65	87	59.236	Pongo_abelii
ENSHCOG00000019848	si:ch211-275j6.5	65	60.000	ENSPCAG00000016193	C12orf65	80	58.273	Procavia_capensis
ENSHCOG00000019848	si:ch211-275j6.5	75	58.779	ENSPCOG00000021574	C12orf65	84	58.125	Propithecus_coquereli
ENSHCOG00000019848	si:ch211-275j6.5	92	59.873	ENSPVAG00000015301	C12orf65	87	59.873	Pteropus_vampyrus
ENSHCOG00000019848	si:ch211-275j6.5	100	62.941	ENSPNYG00000014456	si:ch211-275j6.5	100	62.941	Pundamilia_nyererei
ENSHCOG00000019848	si:ch211-275j6.5	72	65.854	ENSPNAG00000019769	si:ch211-275j6.5	73	65.854	Pygocentrus_nattereri
ENSHCOG00000019848	si:ch211-275j6.5	55	73.404	ENSRNOG00000001073	RGD1563482	71	65.625	Rattus_norvegicus
ENSHCOG00000019848	si:ch211-275j6.5	55	73.404	ENSRBIG00000040789	C12orf65	75	67.742	Rhinopithecus_bieti
ENSHCOG00000019848	si:ch211-275j6.5	55	72.340	ENSRROG00000031384	C12orf65	73	66.935	Rhinopithecus_roxellana
ENSHCOG00000019848	si:ch211-275j6.5	62	67.619	ENSSBOG00000026629	C12orf65	74	63.704	Saimiri_boliviensis_boliviensis
ENSHCOG00000019848	si:ch211-275j6.5	89	54.487	ENSSHAG00000014988	C12orf65	91	53.333	Sarcophilus_harrisii
ENSHCOG00000019848	si:ch211-275j6.5	79	71.852	ENSSFOG00015019122	si:ch211-275j6.5	75	71.852	Scleropages_formosus
ENSHCOG00000019848	si:ch211-275j6.5	98	63.473	ENSSMAG00000016770	si:ch211-275j6.5	94	63.473	Scophthalmus_maximus
ENSHCOG00000019848	si:ch211-275j6.5	75	74.016	ENSSDUG00000020401	si:ch211-275j6.5	81	74.016	Seriola_dumerili
ENSHCOG00000019848	si:ch211-275j6.5	86	70.068	ENSSLDG00000017638	si:ch211-275j6.5	87	70.068	Seriola_lalandi_dorsalis
ENSHCOG00000019848	si:ch211-275j6.5	92	55.414	ENSSPUG00000012613	C12orf65	94	57.407	Sphenodon_punctatus
ENSHCOG00000019848	si:ch211-275j6.5	93	66.456	ENSSPAG00000023476	si:ch211-275j6.5	93	66.456	Stegastes_partitus
ENSHCOG00000019848	si:ch211-275j6.5	86	56.463	ENSSSCG00000009774	C12orf65	89	56.463	Sus_scrofa
ENSHCOG00000019848	si:ch211-275j6.5	71	65.833	ENSTGUG00000005440	C12orf65	94	65.833	Taeniopygia_guttata
ENSHCOG00000019848	si:ch211-275j6.5	81	73.723	ENSTNIG00000015832	si:ch211-275j6.5	80	73.723	Tetraodon_nigroviridis
ENSHCOG00000019848	si:ch211-275j6.5	55	74.468	ENSTBEG00000012500	C12orf65	75	69.355	Tupaia_belangeri
ENSHCOG00000019848	si:ch211-275j6.5	66	66.071	ENSTTRG00000015880	C12orf65	79	62.121	Tursiops_truncatus
ENSHCOG00000019848	si:ch211-275j6.5	55	73.118	ENSUAMG00000019669	C12orf65	75	68.293	Ursus_americanus
ENSHCOG00000019848	si:ch211-275j6.5	55	73.118	ENSUMAG00000004025	C12orf65	75	68.293	Ursus_maritimus
ENSHCOG00000019848	si:ch211-275j6.5	75	63.281	ENSVVUG00000027811	C12orf65	84	63.571	Vulpes_vulpes
ENSHCOG00000019848	si:ch211-275j6.5	89	67.763	ENSXCOG00000000975	si:ch211-275j6.5	89	67.763	Xiphophorus_couchianus