EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000019995 (Gene tree)
Gene ID: 109527849
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 10852 bases
Position: chrKV880314.1:1002232-1013083
Accession: 109527849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000027848	rRNA_proc-arch	PF13234.6	1.6e-78	1	1
ENSHCOP00000027848	DEAD	PF00270.29	6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000028394	-	4346	XM_019889969	ENSHCOP00000027848	981 (aa)	XP_019745528	-

Gene Model

Click here to download ENSHCOG00000019995's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000019995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000019995	mtrex	97	34.787	ENSHCOG00000007191	skiv2l	81	34.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000019995	mtrex	100	84.929	ENSG00000039123	MTREX	85	91.803	Homo_sapiens
ENSHCOG00000019995	mtrex	100	91.233	ENSAPOG00000007814	mtrex	92	91.233	Acanthochromis_polyacanthus
ENSHCOG00000019995	mtrex	100	84.741	ENSAMEG00000013856	MTREX	91	84.741	Ailuropoda_melanoleuca
ENSHCOG00000019995	mtrex	100	89.806	ENSACIG00000015117	mtrex	95	89.806	Amphilophus_citrinellus
ENSHCOG00000019995	mtrex	100	91.437	ENSAOCG00000011884	mtrex	92	91.437	Amphiprion_ocellaris
ENSHCOG00000019995	mtrex	100	91.335	ENSAPEG00000019384	mtrex	92	91.335	Amphiprion_percula
ENSHCOG00000019995	mtrex	100	90.928	ENSATEG00000015117	mtrex	92	91.437	Anabas_testudineus
ENSHCOG00000019995	mtrex	100	83.809	ENSAPLG00000009694	MTREX	95	83.809	Anas_platyrhynchos
ENSHCOG00000019995	mtrex	100	84.959	ENSACAG00000015200	MTREX	88	84.959	Anolis_carolinensis
ENSHCOG00000019995	mtrex	100	84.827	ENSANAG00000023095	MTREX	93	84.827	Aotus_nancymaae
ENSHCOG00000019995	mtrex	100	90.520	ENSACLG00000001921	mtrex	92	90.520	Astatotilapia_calliptera
ENSHCOG00000019995	mtrex	95	85.177	ENSAMXG00000018751	mtrex	91	85.177	Astyanax_mexicanus
ENSHCOG00000019995	mtrex	100	84.725	ENSBTAG00000010518	MTREX	91	84.725	Bos_taurus
ENSHCOG00000019995	mtrex	100	51.822	WBGene00012342	mtr-4	92	51.923	Caenorhabditis_elegans
ENSHCOG00000019995	mtrex	100	84.827	ENSCJAG00000001773	MTREX	92	84.827	Callithrix_jacchus
ENSHCOG00000019995	mtrex	100	84.623	ENSCAFG00000006818	MTREX	91	84.623	Canis_familiaris
ENSHCOG00000019995	mtrex	100	84.623	ENSCAFG00020024352	MTREX	91	84.623	Canis_lupus_dingo
ENSHCOG00000019995	mtrex	100	84.623	ENSCHIG00000024413	MTREX	91	84.623	Capra_hircus
ENSHCOG00000019995	mtrex	93	89.474	ENSTSYG00000007389	MTREX	90	89.474	Carlito_syrichta
ENSHCOG00000019995	mtrex	87	77.752	ENSCAPG00000008696	MTREX	90	77.752	Cavia_aperea
ENSHCOG00000019995	mtrex	100	84.725	ENSCPOG00000009797	MTREX	91	84.725	Cavia_porcellus
ENSHCOG00000019995	mtrex	100	84.827	ENSCCAG00000014177	MTREX	91	84.827	Cebus_capucinus
ENSHCOG00000019995	mtrex	100	84.929	ENSCATG00000042153	MTREX	91	84.929	Cercocebus_atys
ENSHCOG00000019995	mtrex	100	84.725	ENSCLAG00000006622	MTREX	91	84.725	Chinchilla_lanigera
ENSHCOG00000019995	mtrex	100	80.812	ENSCSAG00000016445	MTREX	91	80.812	Chlorocebus_sabaeus
ENSHCOG00000019995	mtrex	65	95.833	ENSCHOG00000010936	-	62	95.833	Choloepus_hoffmanni
ENSHCOG00000019995	mtrex	100	84.623	ENSCPBG00000026551	MTREX	86	84.623	Chrysemys_picta_bellii
ENSHCOG00000019995	mtrex	100	67.442	ENSCING00000003239	-	93	67.442	Ciona_intestinalis
ENSHCOG00000019995	mtrex	100	66.160	ENSCSAVG00000009304	-	99	67.188	Ciona_savignyi
ENSHCOG00000019995	mtrex	100	84.929	ENSCANG00000035770	MTREX	91	84.929	Colobus_angolensis_palliatus
ENSHCOG00000019995	mtrex	100	84.725	ENSCGRG00001024680	Mtrex	91	84.725	Cricetulus_griseus_chok1gshd
ENSHCOG00000019995	mtrex	100	84.725	ENSCGRG00000000307	Mtrex	91	84.725	Cricetulus_griseus_crigri
ENSHCOG00000019995	mtrex	100	90.112	ENSCSEG00000018621	mtrex	94	88.744	Cynoglossus_semilaevis
ENSHCOG00000019995	mtrex	100	90.316	ENSCVAG00000004556	mtrex	92	90.316	Cyprinodon_variegatus
ENSHCOG00000019995	mtrex	100	86.748	ENSDARG00000013457	mtrex	92	86.748	Danio_rerio
ENSHCOG00000019995	mtrex	100	84.725	ENSDNOG00000015375	MTREX	91	84.725	Dasypus_novemcinctus
ENSHCOG00000019995	mtrex	100	84.521	ENSDORG00000006782	Mtrex	91	84.521	Dipodomys_ordii
ENSHCOG00000019995	mtrex	99	64.213	FBgn0001986	Mtr4	89	64.213	Drosophila_melanogaster
ENSHCOG00000019995	mtrex	80	82.511	ENSETEG00000000727	MTREX	75	82.511	Echinops_telfairi
ENSHCOG00000019995	mtrex	100	74.440	ENSEBUG00000012869	mtrex	92	74.440	Eptatretus_burgeri
ENSHCOG00000019995	mtrex	100	84.623	ENSEASG00005013270	MTREX	91	84.623	Equus_asinus_asinus
ENSHCOG00000019995	mtrex	100	84.725	ENSECAG00000023723	MTREX	90	89.767	Equus_caballus
ENSHCOG00000019995	mtrex	98	76.580	ENSEEUG00000000527	MTREX	91	76.580	Erinaceus_europaeus
ENSHCOG00000019995	mtrex	100	87.169	ENSELUG00000004898	mtrex	100	87.678	Esox_lucius
ENSHCOG00000019995	mtrex	100	84.827	ENSFCAG00000010575	MTREX	91	84.827	Felis_catus
ENSHCOG00000019995	mtrex	100	83.605	ENSFALG00000010850	MTREX	92	83.605	Ficedula_albicollis
ENSHCOG00000019995	mtrex	100	84.420	ENSFDAG00000011199	MTREX	91	84.420	Fukomys_damarensis
ENSHCOG00000019995	mtrex	100	90.010	ENSFHEG00000023014	mtrex	92	90.010	Fundulus_heteroclitus
ENSHCOG00000019995	mtrex	96	89.502	ENSGMOG00000014702	mtrex	91	89.502	Gadus_morhua
ENSHCOG00000019995	mtrex	100	83.910	ENSGALG00000014709	MTREX	79	83.910	Gallus_gallus
ENSHCOG00000019995	mtrex	100	89.806	ENSGAFG00000012425	mtrex	96	89.806	Gambusia_affinis
ENSHCOG00000019995	mtrex	100	86.646	ENSGACG00000016260	mtrex	96	88.198	Gasterosteus_aculeatus
ENSHCOG00000019995	mtrex	100	84.725	ENSGAGG00000020036	MTREX	92	84.725	Gopherus_agassizii
ENSHCOG00000019995	mtrex	100	84.929	ENSGGOG00000001867	MTREX	91	84.929	Gorilla_gorilla
ENSHCOG00000019995	mtrex	100	90.520	ENSHBUG00000006229	mtrex	92	90.520	Haplochromis_burtoni
ENSHCOG00000019995	mtrex	100	84.521	ENSHGLG00000019445	SKIV2L2	91	84.521	Heterocephalus_glaber_female
ENSHCOG00000019995	mtrex	100	84.521	ENSHGLG00100011833	SKIV2L2	91	84.521	Heterocephalus_glaber_male
ENSHCOG00000019995	mtrex	100	86.456	ENSIPUG00000024348	skiv2l2	92	86.456	Ictalurus_punctatus
ENSHCOG00000019995	mtrex	100	84.623	ENSSTOG00000010802	MTREX	91	84.623	Ictidomys_tridecemlineatus
ENSHCOG00000019995	mtrex	100	79.103	ENSJJAG00000020975	Mtrex	91	79.103	Jaculus_jaculus
ENSHCOG00000019995	mtrex	100	90.520	ENSKMAG00000012642	mtrex	95	89.704	Kryptolebias_marmoratus
ENSHCOG00000019995	mtrex	100	91.131	ENSLBEG00000019367	mtrex	98	89.501	Labrus_bergylta
ENSHCOG00000019995	mtrex	100	85.438	ENSLACG00000009075	MTREX	92	85.438	Latimeria_chalumnae
ENSHCOG00000019995	mtrex	100	86.992	ENSLOCG00000010186	mtrex	92	86.992	Lepisosteus_oculatus
ENSHCOG00000019995	mtrex	99	82.587	ENSLAFG00000010497	MTREX	91	82.587	Loxodonta_africana
ENSHCOG00000019995	mtrex	100	84.929	ENSMFAG00000031610	MTREX	91	84.929	Macaca_fascicularis
ENSHCOG00000019995	mtrex	100	84.827	ENSMMUG00000010379	MTREX	91	84.827	Macaca_mulatta
ENSHCOG00000019995	mtrex	100	84.929	ENSMNEG00000032746	MTREX	91	84.929	Macaca_nemestrina
ENSHCOG00000019995	mtrex	100	84.929	ENSMLEG00000041051	MTREX	91	84.929	Mandrillus_leucophaeus
ENSHCOG00000019995	mtrex	100	91.335	ENSMAMG00000016753	mtrex	96	91.641	Mastacembelus_armatus
ENSHCOG00000019995	mtrex	100	90.520	ENSMZEG00005000414	mtrex	92	90.520	Maylandia_zebra
ENSHCOG00000019995	mtrex	99	60.729	ENSMGAG00000003980	MTREX	96	60.729	Meleagris_gallopavo
ENSHCOG00000019995	mtrex	100	84.827	ENSMAUG00000010727	Mtrex	91	84.827	Mesocricetus_auratus
ENSHCOG00000019995	mtrex	100	84.827	ENSMICG00000012779	MTREX	91	84.827	Microcebus_murinus
ENSHCOG00000019995	mtrex	100	84.827	ENSMOCG00000019886	Mtrex	91	84.827	Microtus_ochrogaster
ENSHCOG00000019995	mtrex	100	90.826	ENSMMOG00000002476	mtrex	95	90.826	Mola_mola
ENSHCOG00000019995	mtrex	100	84.318	ENSMODG00000019494	MTREX	92	84.318	Monodelphis_domestica
ENSHCOG00000019995	mtrex	100	85.085	ENSMALG00000002917	mtrex	98	85.586	Monopterus_albus
ENSHCOG00000019995	mtrex	100	84.420	MGP_CAROLIEiJ_G0018896	Mtrex	91	84.420	Mus_caroli
ENSHCOG00000019995	mtrex	100	84.420	ENSMUSG00000016018	Mtrex	91	84.420	Mus_musculus
ENSHCOG00000019995	mtrex	100	84.521	MGP_PahariEiJ_G0015967	Mtrex	91	84.521	Mus_pahari
ENSHCOG00000019995	mtrex	100	84.420	MGP_SPRETEiJ_G0019775	Mtrex	91	84.420	Mus_spretus
ENSHCOG00000019995	mtrex	100	84.827	ENSMPUG00000007619	MTREX	91	84.827	Mustela_putorius_furo
ENSHCOG00000019995	mtrex	100	84.365	ENSMLUG00000001152	MTREX	91	84.365	Myotis_lucifugus
ENSHCOG00000019995	mtrex	100	84.827	ENSNGAG00000011938	Mtrex	91	84.827	Nannospalax_galili
ENSHCOG00000019995	mtrex	100	90.622	ENSNBRG00000011293	mtrex	92	90.622	Neolamprologus_brichardi
ENSHCOG00000019995	mtrex	100	80.894	ENSNLEG00000001494	MTREX	91	80.894	Nomascus_leucogenys
ENSHCOG00000019995	mtrex	74	96.078	ENSMEUG00000006496	-	70	96.078	Notamacropus_eugenii
ENSHCOG00000019995	mtrex	92	78.017	ENSOPRG00000008009	MTREX	86	78.017	Ochotona_princeps
ENSHCOG00000019995	mtrex	100	84.216	ENSODEG00000017234	MTREX	91	84.216	Octodon_degus
ENSHCOG00000019995	mtrex	100	90.622	ENSONIG00000007587	mtrex	92	90.622	Oreochromis_niloticus
ENSHCOG00000019995	mtrex	56	78.022	ENSOANG00000004885	-	99	78.022	Ornithorhynchus_anatinus
ENSHCOG00000019995	mtrex	100	84.929	ENSOCUG00000004463	MTREX	91	84.929	Oryctolagus_cuniculus
ENSHCOG00000019995	mtrex	100	89.501	ENSORLG00000005443	mtrex	92	90.010	Oryzias_latipes
ENSHCOG00000019995	mtrex	100	89.399	ENSORLG00020006329	mtrex	94	89.741	Oryzias_latipes_hni
ENSHCOG00000019995	mtrex	100	89.399	ENSORLG00015012924	mtrex	94	89.741	Oryzias_latipes_hsok
ENSHCOG00000019995	mtrex	100	89.318	ENSOMEG00000008825	mtrex	92	89.318	Oryzias_melastigma
ENSHCOG00000019995	mtrex	100	84.929	ENSOGAG00000002886	MTREX	91	84.929	Otolemur_garnettii
ENSHCOG00000019995	mtrex	100	84.365	ENSOARG00000007764	MTREX	91	84.365	Ovis_aries
ENSHCOG00000019995	mtrex	100	84.929	ENSPPAG00000039291	MTREX	91	84.929	Pan_paniscus
ENSHCOG00000019995	mtrex	100	84.827	ENSPPRG00000019701	MTREX	91	84.827	Panthera_pardus
ENSHCOG00000019995	mtrex	100	83.299	ENSPTIG00000009313	MTREX	91	83.299	Panthera_tigris_altaica
ENSHCOG00000019995	mtrex	100	84.929	ENSPTRG00000016878	MTREX	91	84.929	Pan_troglodytes
ENSHCOG00000019995	mtrex	100	84.827	ENSPANG00000009697	MTREX	91	84.827	Papio_anubis
ENSHCOG00000019995	mtrex	100	87.271	ENSPKIG00000020833	mtrex	96	85.947	Paramormyrops_kingsleyae
ENSHCOG00000019995	mtrex	100	84.521	ENSPSIG00000012150	MTREX	92	84.521	Pelodiscus_sinensis
ENSHCOG00000019995	mtrex	100	89.522	ENSPMGG00000002582	mtrex	95	89.522	Periophthalmus_magnuspinnatus
ENSHCOG00000019995	mtrex	95	66.452	ENSPMAG00000009668	mtrex	91	66.452	Petromyzon_marinus
ENSHCOG00000019995	mtrex	100	84.216	ENSPCIG00000024730	MTREX	100	84.216	Phascolarctos_cinereus
ENSHCOG00000019995	mtrex	83	88.984	ENSPFOG00000003141	mtrex	100	88.984	Poecilia_formosa
ENSHCOG00000019995	mtrex	100	90.010	ENSPLAG00000021311	mtrex	92	90.010	Poecilia_latipinna
ENSHCOG00000019995	mtrex	100	88.787	ENSPMEG00000010597	mtrex	99	89.093	Poecilia_mexicana
ENSHCOG00000019995	mtrex	100	89.806	ENSPREG00000003089	mtrex	94	89.704	Poecilia_reticulata
ENSHCOG00000019995	mtrex	98	84.663	ENSPPYG00000015469	MTREX	89	84.663	Pongo_abelii
ENSHCOG00000019995	mtrex	94	74.419	ENSPCAG00000013120	MTREX	85	74.419	Procavia_capensis
ENSHCOG00000019995	mtrex	99	78.451	ENSPCOG00000018092	MTREX	90	78.451	Propithecus_coquereli
ENSHCOG00000019995	mtrex	100	84.725	ENSPVAG00000002445	MTREX	91	84.725	Pteropus_vampyrus
ENSHCOG00000019995	mtrex	100	90.418	ENSPNYG00000006164	mtrex	92	90.418	Pundamilia_nyererei
ENSHCOG00000019995	mtrex	100	86.762	ENSPNAG00000008794	mtrex	95	85.031	Pygocentrus_nattereri
ENSHCOG00000019995	mtrex	99	84.004	ENSRNOG00000010125	Mtrex	88	84.004	Rattus_norvegicus
ENSHCOG00000019995	mtrex	100	83.096	ENSRBIG00000034930	MTREX	91	83.096	Rhinopithecus_bieti
ENSHCOG00000019995	mtrex	100	84.929	ENSRROG00000039895	MTREX	91	84.929	Rhinopithecus_roxellana
ENSHCOG00000019995	mtrex	99	53.869	YJL050W	MTR4	90	53.869	Saccharomyces_cerevisiae
ENSHCOG00000019995	mtrex	100	84.827	ENSSBOG00000026693	MTREX	93	84.827	Saimiri_boliviensis_boliviensis
ENSHCOG00000019995	mtrex	100	84.318	ENSSHAG00000004600	MTREX	95	84.318	Sarcophilus_harrisii
ENSHCOG00000019995	mtrex	100	87.169	ENSSFOG00015014355	skiv2l2	93	87.169	Scleropages_formosus
ENSHCOG00000019995	mtrex	100	91.641	ENSSMAG00000007572	mtrex	92	91.641	Scophthalmus_maximus
ENSHCOG00000019995	mtrex	100	91.845	ENSSDUG00000023789	mtrex	94	91.845	Seriola_dumerili
ENSHCOG00000019995	mtrex	100	91.845	ENSSLDG00000006301	mtrex	95	91.641	Seriola_lalandi_dorsalis
ENSHCOG00000019995	mtrex	100	84.420	ENSSARG00000008387	MTREX	91	84.420	Sorex_araneus
ENSHCOG00000019995	mtrex	89	86.667	ENSSPUG00000007071	MTREX	87	86.667	Sphenodon_punctatus
ENSHCOG00000019995	mtrex	100	90.010	ENSSPAG00000011319	mtrex	93	90.214	Stegastes_partitus
ENSHCOG00000019995	mtrex	100	84.827	ENSSSCG00000016911	MTREX	91	84.827	Sus_scrofa
ENSHCOG00000019995	mtrex	100	82.994	ENSTGUG00000002480	MTREX	91	82.994	Taeniopygia_guttata
ENSHCOG00000019995	mtrex	100	90.316	ENSTRUG00000014571	mtrex	94	88.662	Takifugu_rubripes
ENSHCOG00000019995	mtrex	96	72.959	ENSTBEG00000007769	MTREX	87	72.959	Tupaia_belangeri
ENSHCOG00000019995	mtrex	100	84.521	ENSTTRG00000008678	MTREX	91	84.521	Tursiops_truncatus
ENSHCOG00000019995	mtrex	100	84.827	ENSUAMG00000023061	MTREX	91	84.827	Ursus_americanus
ENSHCOG00000019995	mtrex	100	84.146	ENSUMAG00000009373	MTREX	99	85.193	Ursus_maritimus
ENSHCOG00000019995	mtrex	91	89.883	ENSVPAG00000011174	MTREX	85	89.883	Vicugna_pacos
ENSHCOG00000019995	mtrex	100	84.725	ENSVVUG00000021337	MTREX	91	84.725	Vulpes_vulpes
ENSHCOG00000019995	mtrex	100	84.318	ENSXETG00000032798	MTREX	92	84.318	Xenopus_tropicalis
ENSHCOG00000019995	mtrex	100	90.418	ENSXMAG00000004799	mtrex	96	89.297	Xiphophorus_maculatus