EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000020091 (Gene tree)
Gene ID: 109508149
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 9588 bases
Position: chrKV880516.1:277347-286934
Accession: 109508149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000016351	SAP	PF02037.27	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000028430	-	4001	XM_019858019	ENSHCOP00000016351	829 (aa)	XP_019713578	UPI00094E0B18

Gene Model

Click here to download ENSHCOG00000020091's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000020091's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000020091	hnrnpub	77	43.036	ENSHCOG00000017927	HNRNPUL1	53	47.854

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000020091	hnrnpub	83	79.545	ENSG00000153187	HNRNPU	99	63.333	Homo_sapiens
ENSHCOG00000020091	hnrnpub	100	73.045	ENSAPOG00000017400	hnrnpub	100	72.684	Acanthochromis_polyacanthus
ENSHCOG00000020091	hnrnpub	78	51.343	ENSAMEG00000009145	HNRNPU	77	83.333	Ailuropoda_melanoleuca
ENSHCOG00000020091	hnrnpub	100	66.988	ENSACIG00000012138	hnrnpub	93	89.189	Amphilophus_citrinellus
ENSHCOG00000020091	hnrnpub	100	73.646	ENSAOCG00000015843	hnrnpub	100	72.563	Amphiprion_ocellaris
ENSHCOG00000020091	hnrnpub	100	73.646	ENSAPEG00000014679	hnrnpub	100	72.563	Amphiprion_percula
ENSHCOG00000020091	hnrnpub	98	73.285	ENSATEG00000016178	hnrnpub	97	72.761	Anabas_testudineus
ENSHCOG00000020091	hnrnpub	85	70.455	ENSACAG00000004511	HNRNPU	76	75.000	Anolis_carolinensis
ENSHCOG00000020091	hnrnpub	78	54.012	ENSANAG00000033895	-	79	57.436	Aotus_nancymaae
ENSHCOG00000020091	hnrnpub	100	74.548	ENSACLG00000008165	hnrnpub	85	76.968	Astatotilapia_calliptera
ENSHCOG00000020091	hnrnpub	83	79.545	ENSBTAG00000007606	HNRNPU	77	83.333	Bos_taurus
ENSHCOG00000020091	hnrnpub	83	79.545	ENSCJAG00000016914	HNRNPU	77	83.333	Callithrix_jacchus
ENSHCOG00000020091	hnrnpub	78	54.211	ENSCAFG00020000918	HNRNPU	74	52.741	Canis_lupus_dingo
ENSHCOG00000020091	hnrnpub	78	54.518	ENSCHIG00000004900	HNRNPU	69	57.886	Capra_hircus
ENSHCOG00000020091	hnrnpub	83	79.545	ENSCCAG00000037859	-	77	83.333	Cebus_capucinus
ENSHCOG00000020091	hnrnpub	83	79.545	ENSCATG00000035273	HNRNPU	77	83.333	Cercocebus_atys
ENSHCOG00000020091	hnrnpub	78	54.211	ENSCLAG00000007100	HNRNPU	73	52.263	Chinchilla_lanigera
ENSHCOG00000020091	hnrnpub	78	54.012	ENSCSAG00000009219	HNRNPU	74	52.493	Chlorocebus_sabaeus
ENSHCOG00000020091	hnrnpub	83	79.545	ENSCHOG00000001387	HNRNPU	75	83.333	Choloepus_hoffmanni
ENSHCOG00000020091	hnrnpub	86	77.273	ENSCPBG00000009415	HNRNPU	76	80.556	Chrysemys_picta_bellii
ENSHCOG00000020091	hnrnpub	83	79.545	ENSCANG00000022780	HNRNPU	77	83.333	Colobus_angolensis_palliatus
ENSHCOG00000020091	hnrnpub	84	74.000	ENSCGRG00001020525	Hnrnpu	80	83.333	Cricetulus_griseus_chok1gshd
ENSHCOG00000020091	hnrnpub	100	71.190	ENSCSEG00000010804	hnrnpub	88	91.892	Cynoglossus_semilaevis
ENSHCOG00000020091	hnrnpub	71	82.353	ENSCVAG00000004280	hnrnpub	80	90.000	Cyprinodon_variegatus
ENSHCOG00000020091	hnrnpub	78	61.669	ENSDARG00000015206	hnrnpua	84	58.224	Danio_rerio
ENSHCOG00000020091	hnrnpub	100	56.032	ENSDARG00000004735	hnrnpub	84	60.699	Danio_rerio
ENSHCOG00000020091	hnrnpub	99	48.736	ENSDNOG00000000215	HNRNPU	86	83.333	Dasypus_novemcinctus
ENSHCOG00000020091	hnrnpub	78	54.211	ENSDORG00000015491	Hnrnpu	74	52.836	Dipodomys_ordii
ENSHCOG00000020091	hnrnpub	83	79.545	ENSETEG00000014565	HNRNPU	77	83.333	Echinops_telfairi
ENSHCOG00000020091	hnrnpub	79	54.066	ENSEASG00005003017	HNRNPU	74	52.180	Equus_asinus_asinus
ENSHCOG00000020091	hnrnpub	79	54.217	ENSECAG00000007955	HNRNPU	74	52.326	Equus_caballus
ENSHCOG00000020091	hnrnpub	100	67.509	ENSELUG00000010733	hnrnpub	85	70.556	Esox_lucius
ENSHCOG00000020091	hnrnpub	88	62.950	ENSELUG00000011966	hnrnpua	80	69.535	Esox_lucius
ENSHCOG00000020091	hnrnpub	76	54.631	ENSFCAG00000002156	HNRNPU	74	52.863	Felis_catus
ENSHCOG00000020091	hnrnpub	92	81.818	ENSFDAG00000006026	HNRNPU	99	86.111	Fukomys_damarensis
ENSHCOG00000020091	hnrnpub	83	74.610	ENSFHEG00000022639	hnrnpub	100	69.340	Fundulus_heteroclitus
ENSHCOG00000020091	hnrnpub	83	68.706	ENSGMOG00000001755	hnrnpub	83	69.417	Gadus_morhua
ENSHCOG00000020091	hnrnpub	83	79.070	ENSGALG00000010671	HNRNPU	73	80.556	Gallus_gallus
ENSHCOG00000020091	hnrnpub	83	75.714	ENSGAFG00000009369	hnrnpub	100	71.071	Gambusia_affinis
ENSHCOG00000020091	hnrnpub	83	71.448	ENSGACG00000004679	hnrnpub	99	66.135	Gasterosteus_aculeatus
ENSHCOG00000020091	hnrnpub	83	79.545	ENSGGOG00000004061	HNRNPU	77	83.333	Gorilla_gorilla
ENSHCOG00000020091	hnrnpub	100	74.668	ENSHBUG00000012290	hnrnpub	85	77.114	Haplochromis_burtoni
ENSHCOG00000020091	hnrnpub	83	81.818	ENSHGLG00000010594	-	75	86.111	Heterocephalus_glaber_female
ENSHCOG00000020091	hnrnpub	92	81.818	ENSHGLG00100015093	HNRNPU	99	86.111	Heterocephalus_glaber_male
ENSHCOG00000020091	hnrnpub	76	90.909	ENSIPUG00000007749	hnrnpu	89	94.595	Ictalurus_punctatus
ENSHCOG00000020091	hnrnpub	90	54.141	ENSJJAG00000011371	Hnrnpu	78	83.333	Jaculus_jaculus
ENSHCOG00000020091	hnrnpub	100	71.886	ENSKMAG00000004532	hnrnpub	100	72.361	Kryptolebias_marmoratus
ENSHCOG00000020091	hnrnpub	83	80.115	ENSLBEG00000022520	hnrnpub	100	73.484	Labrus_bergylta
ENSHCOG00000020091	hnrnpub	80	50.901	ENSLACG00000017463	HNRNPU	74	49.551	Latimeria_chalumnae
ENSHCOG00000020091	hnrnpub	85	85.714	ENSLOCG00000016652	hnrnpua	77	94.595	Lepisosteus_oculatus
ENSHCOG00000020091	hnrnpub	84	79.545	ENSLAFG00000021377	HNRNPU	80	83.333	Loxodonta_africana
ENSHCOG00000020091	hnrnpub	83	79.545	ENSMFAG00000037308	HNRNPU	77	83.333	Macaca_fascicularis
ENSHCOG00000020091	hnrnpub	78	54.012	ENSMMUG00000021098	HNRNPU	75	52.493	Macaca_mulatta
ENSHCOG00000020091	hnrnpub	83	79.545	ENSMNEG00000043645	HNRNPU	77	83.333	Macaca_nemestrina
ENSHCOG00000020091	hnrnpub	100	77.978	ENSMAMG00000007196	hnrnpub	100	74.248	Mastacembelus_armatus
ENSHCOG00000020091	hnrnpub	100	74.548	ENSMZEG00005003185	hnrnpub	85	77.697	Maylandia_zebra
ENSHCOG00000020091	hnrnpub	86	74.000	ENSMAUG00000008842	Hnrnpu	78	83.333	Mesocricetus_auratus
ENSHCOG00000020091	hnrnpub	83	79.545	ENSMICG00000004616	HNRNPU	77	83.333	Microcebus_murinus
ENSHCOG00000020091	hnrnpub	86	74.000	ENSMOCG00000015623	Hnrnpu	78	83.333	Microtus_ochrogaster
ENSHCOG00000020091	hnrnpub	83	79.545	ENSMODG00000006515	HNRNPU	76	83.333	Monodelphis_domestica
ENSHCOG00000020091	hnrnpub	96	74.812	ENSMALG00000018243	hnrnpub	97	72.727	Monopterus_albus
ENSHCOG00000020091	hnrnpub	78	51.940	MGP_CAROLIEiJ_G0014962	Hnrnpu	75	51.965	Mus_caroli
ENSHCOG00000020091	hnrnpub	84	74.000	ENSMUSG00000039630	Hnrnpu	79	83.333	Mus_musculus
ENSHCOG00000020091	hnrnpub	84	74.000	MGP_PahariEiJ_G0028193	Hnrnpu	79	83.333	Mus_pahari
ENSHCOG00000020091	hnrnpub	84	74.000	MGP_SPRETEiJ_G0015761	Hnrnpu	79	83.333	Mus_spretus
ENSHCOG00000020091	hnrnpub	84	77.273	ENSMLUG00000000475	HNRNPU	79	80.556	Myotis_lucifugus
ENSHCOG00000020091	hnrnpub	78	54.058	ENSNGAG00000019075	Hnrnpu	75	51.890	Nannospalax_galili
ENSHCOG00000020091	hnrnpub	100	74.548	ENSNBRG00000017855	hnrnpub	85	76.968	Neolamprologus_brichardi
ENSHCOG00000020091	hnrnpub	77	79.545	ENSMEUG00000000541	HNRNPU	71	83.333	Notamacropus_eugenii
ENSHCOG00000020091	hnrnpub	83	79.651	ENSONIG00000001260	hnrnpub	88	76.822	Oreochromis_niloticus
ENSHCOG00000020091	hnrnpub	82	79.545	ENSOCUG00000014469	HNRNPU	69	83.333	Oryctolagus_cuniculus
ENSHCOG00000020091	hnrnpub	100	73.709	ENSORLG00000016114	hnrnpub	85	79.330	Oryzias_latipes
ENSHCOG00000020091	hnrnpub	100	71.480	ENSORLG00020005363	hnrnpub	85	79.039	Oryzias_latipes_hni
ENSHCOG00000020091	hnrnpub	83	79.446	ENSORLG00015001190	hnrnpub	100	72.082	Oryzias_latipes_hsok
ENSHCOG00000020091	hnrnpub	83	78.603	ENSOMEG00000014951	hnrnpub	86	77.616	Oryzias_melastigma
ENSHCOG00000020091	hnrnpub	78	54.364	ENSOGAG00000014024	HNRNPU	75	52.180	Otolemur_garnettii
ENSHCOG00000020091	hnrnpub	83	79.545	ENSOARG00000004985	HNRNPU	85	83.333	Ovis_aries
ENSHCOG00000020091	hnrnpub	83	79.545	ENSPPAG00000038652	HNRNPU	77	83.333	Pan_paniscus
ENSHCOG00000020091	hnrnpub	85	79.545	ENSPPRG00000002662	HNRNPU	77	83.333	Panthera_pardus
ENSHCOG00000020091	hnrnpub	83	79.545	ENSPTRG00000002182	HNRNPU	77	83.333	Pan_troglodytes
ENSHCOG00000020091	hnrnpub	78	54.012	ENSPANG00000011643	HNRNPU	79	57.436	Papio_anubis
ENSHCOG00000020091	hnrnpub	100	61.733	ENSPKIG00000006885	hnrnpua	82	63.994	Paramormyrops_kingsleyae
ENSHCOG00000020091	hnrnpub	100	63.702	ENSPKIG00000022332	hnrnpub	100	61.372	Paramormyrops_kingsleyae
ENSHCOG00000020091	hnrnpub	83	79.545	ENSPCIG00000008657	HNRNPU	76	83.333	Phascolarctos_cinereus
ENSHCOG00000020091	hnrnpub	83	75.143	ENSPFOG00000002908	hnrnpub	100	70.833	Poecilia_formosa
ENSHCOG00000020091	hnrnpub	83	75.284	ENSPLAG00000004160	hnrnpub	100	70.833	Poecilia_latipinna
ENSHCOG00000020091	hnrnpub	83	79.545	ENSPCOG00000018655	-	77	83.333	Propithecus_coquereli
ENSHCOG00000020091	hnrnpub	83	79.545	ENSPVAG00000002581	HNRNPU	77	83.333	Pteropus_vampyrus
ENSHCOG00000020091	hnrnpub	100	74.668	ENSPNYG00000021642	hnrnpub	85	77.114	Pundamilia_nyererei
ENSHCOG00000020091	hnrnpub	100	63.377	ENSPNAG00000001055	hnrnpub	83	65.116	Pygocentrus_nattereri
ENSHCOG00000020091	hnrnpub	78	51.940	ENSRNOG00000033790	Hnrnpu	75	52.111	Rattus_norvegicus
ENSHCOG00000020091	hnrnpub	78	53.549	ENSRBIG00000031519	HNRNPU	78	56.923	Rhinopithecus_bieti
ENSHCOG00000020091	hnrnpub	80	53.134	ENSRROG00000041642	HNRNPU	79	57.046	Rhinopithecus_roxellana
ENSHCOG00000020091	hnrnpub	100	61.730	ENSSFOG00015019004	hnrnpu	81	66.346	Scleropages_formosus
ENSHCOG00000020091	hnrnpub	100	62.932	ENSSFOG00015001124	hnrnpub	82	66.035	Scleropages_formosus
ENSHCOG00000020091	hnrnpub	83	79.107	ENSSMAG00000003607	hnrnpub	82	79.251	Scophthalmus_maximus
ENSHCOG00000020091	hnrnpub	83	79.942	ENSSDUG00000005912	hnrnpub	100	73.141	Seriola_dumerili
ENSHCOG00000020091	hnrnpub	83	79.651	ENSSLDG00000004899	hnrnpub	100	72.706	Seriola_lalandi_dorsalis
ENSHCOG00000020091	hnrnpub	85	80.488	ENSSPUG00000011393	HNRNPU	78	83.333	Sphenodon_punctatus
ENSHCOG00000020091	hnrnpub	83	78.634	ENSSPAG00000011853	hnrnpub	100	73.197	Stegastes_partitus
ENSHCOG00000020091	hnrnpub	83	79.545	ENSSSCG00000010877	HNRNPU	77	83.333	Sus_scrofa
ENSHCOG00000020091	hnrnpub	100	71.239	ENSTRUG00000007759	hnrnpub	100	70.036	Takifugu_rubripes
ENSHCOG00000020091	hnrnpub	100	66.106	ENSTNIG00000009725	hnrnpub	96	83.784	Tetraodon_nigroviridis
ENSHCOG00000020091	hnrnpub	83	79.545	ENSUAMG00000021120	HNRNPU	77	83.333	Ursus_americanus
ENSHCOG00000020091	hnrnpub	83	71.111	ENSUMAG00000012322	HNRNPU	84	72.973	Ursus_maritimus
ENSHCOG00000020091	hnrnpub	77	79.545	ENSVPAG00000010520	HNRNPU	81	83.333	Vicugna_pacos
ENSHCOG00000020091	hnrnpub	78	54.211	ENSVVUG00000026524	HNRNPU	74	52.741	Vulpes_vulpes
ENSHCOG00000020091	hnrnpub	86	48.659	ENSXETG00000011386	hnrnpu	76	50.588	Xenopus_tropicalis
ENSHCOG00000020091	hnrnpub	83	75.143	ENSXMAG00000010356	hnrnpub	100	70.749	Xiphophorus_maculatus