EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000020309 (Gene tree)
Gene ID: 109521554
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 21-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3080 bases
Position: chrKV879730.1:414611-417690
Accession: 109521554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000016558	zf-C2H2	PF00096.26	1.9e-17	1	3
ENSHCOP00000016558	zf-C2H2	PF00096.26	1.9e-17	2	3
ENSHCOP00000016558	zf-C2H2	PF00096.26	1.9e-17	3	3
ENSHCOP00000016558	zf-met	PF12874.7	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000024740	-	1697	XM_019879446	ENSHCOP00000016558	346 (aa)	XP_019735005	UPI00094F284B

Gene Model

Click here to download ENSHCOG00000020309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000020309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000020309	-	51	33.043	ENSHCOG00000020556	-	77	33.043
ENSHCOG00000020309	-	96	45.679	ENSHCOG00000014887	-	56	45.679
ENSHCOG00000020309	-	97	45.349	ENSHCOG00000014855	-	94	30.641
ENSHCOG00000020309	-	72	53.165	ENSHCOG00000020924	-	93	53.165
ENSHCOG00000020309	-	99	33.333	ENSHCOG00000020976	-	90	33.333
ENSHCOG00000020309	-	95	43.200	ENSHCOG00000009103	-	100	43.200
ENSHCOG00000020309	-	50	53.333	ENSHCOG00000007664	-	98	52.336
ENSHCOG00000020309	-	97	49.123	ENSHCOG00000008213	-	94	49.123
ENSHCOG00000020309	-	97	37.778	ENSHCOG00000014891	-	98	37.778
ENSHCOG00000020309	-	99	48.598	ENSHCOG00000001942	-	100	48.598
ENSHCOG00000020309	-	60	47.619	ENSHCOG00000015438	-	99	47.619
ENSHCOG00000020309	-	90	47.826	ENSHCOG00000019541	-	97	47.826
ENSHCOG00000020309	-	97	54.286	ENSHCOG00000001242	-	99	54.286
ENSHCOG00000020309	-	50	47.059	ENSHCOG00000010282	znf236	54	44.762
ENSHCOG00000020309	-	79	52.336	ENSHCOG00000014713	-	99	52.336
ENSHCOG00000020309	-	99	42.609	ENSHCOG00000008133	-	98	42.609
ENSHCOG00000020309	-	96	49.231	ENSHCOG00000019389	-	97	49.231
ENSHCOG00000020309	-	99	45.098	ENSHCOG00000008227	-	94	45.098
ENSHCOG00000020309	-	99	49.524	ENSHCOG00000014881	-	85	49.524
ENSHCOG00000020309	-	82	53.846	ENSHCOG00000014792	-	85	53.846
ENSHCOG00000020309	-	98	48.750	ENSHCOG00000014797	-	97	48.750
ENSHCOG00000020309	-	50	54.286	ENSHCOG00000021033	-	80	54.286
ENSHCOG00000020309	-	99	48.148	ENSHCOG00000008234	-	92	48.148
ENSHCOG00000020309	-	97	32.164	ENSHCOG00000019458	-	97	45.714
ENSHCOG00000020309	-	78	51.786	ENSHCOG00000019454	-	85	51.786
ENSHCOG00000020309	-	52	50.467	ENSHCOG00000013455	-	91	49.412
ENSHCOG00000020309	-	97	51.485	ENSHCOG00000001870	-	98	51.485
ENSHCOG00000020309	-	77	55.000	ENSHCOG00000020993	-	87	55.000
ENSHCOG00000020309	-	82	50.476	ENSHCOG00000000138	-	93	50.476
ENSHCOG00000020309	-	97	32.877	ENSHCOG00000019006	-	100	51.136
ENSHCOG00000020309	-	95	50.617	ENSHCOG00000014999	-	98	50.617
ENSHCOG00000020309	-	99	49.383	ENSHCOG00000014994	-	84	49.383
ENSHCOG00000020309	-	74	52.381	ENSHCOG00000013489	-	97	52.381
ENSHCOG00000020309	-	98	43.925	ENSHCOG00000000947	-	99	43.925
ENSHCOG00000020309	-	52	51.852	ENSHCOG00000019465	-	81	51.852
ENSHCOG00000020309	-	59	39.759	ENSHCOG00000021167	-	54	39.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000020309	-	98	48.750	ENSAPOG00000021966	-	98	48.750	Acanthochromis_polyacanthus
ENSHCOG00000020309	-	50	50.485	ENSACIG00000022738	-	92	50.000	Amphilophus_citrinellus
ENSHCOG00000020309	-	60	34.259	ENSAOCG00000001971	-	64	34.259	Amphiprion_ocellaris
ENSHCOG00000020309	-	99	42.029	ENSAOCG00000020652	-	100	42.029	Amphiprion_ocellaris
ENSHCOG00000020309	-	72	44.186	ENSAOCG00000022836	-	60	44.186	Amphiprion_ocellaris
ENSHCOG00000020309	-	98	50.000	ENSAOCG00000022529	-	98	50.000	Amphiprion_ocellaris
ENSHCOG00000020309	-	71	44.186	ENSAPEG00000003776	-	60	44.186	Amphiprion_percula
ENSHCOG00000020309	-	64	46.535	ENSATEG00000022064	-	93	47.826	Anabas_testudineus
ENSHCOG00000020309	-	53	45.370	ENSATEG00000014684	-	97	45.370	Anabas_testudineus
ENSHCOG00000020309	-	50	43.750	ENSATEG00000021602	-	91	43.750	Anabas_testudineus
ENSHCOG00000020309	-	99	50.633	ENSACLG00000008374	-	99	50.633	Astatotilapia_calliptera
ENSHCOG00000020309	-	54	32.895	ENSAMXG00000034934	-	93	32.895	Astyanax_mexicanus
ENSHCOG00000020309	-	77	37.857	ENSCSEG00000019848	-	79	40.566	Cynoglossus_semilaevis
ENSHCOG00000020309	-	97	38.095	ENSCVAG00000000161	-	98	38.095	Cyprinodon_variegatus
ENSHCOG00000020309	-	93	33.813	ENSFHEG00000013228	-	95	45.794	Fundulus_heteroclitus
ENSHCOG00000020309	-	97	36.905	ENSGAFG00000000549	-	98	36.905	Gambusia_affinis
ENSHCOG00000020309	-	97	50.000	ENSHBUG00000017924	-	98	50.000	Haplochromis_burtoni
ENSHCOG00000020309	-	50	44.660	ENSKMAG00000015304	-	67	44.660	Kryptolebias_marmoratus
ENSHCOG00000020309	-	99	45.000	ENSLBEG00000008850	-	99	45.000	Labrus_bergylta
ENSHCOG00000020309	-	53	44.762	ENSLBEG00000026457	-	99	44.762	Labrus_bergylta
ENSHCOG00000020309	-	97	50.633	ENSMZEG00005011431	-	98	50.633	Maylandia_zebra
ENSHCOG00000020309	-	97	46.667	ENSMALG00000005696	-	98	46.250	Monopterus_albus
ENSHCOG00000020309	-	99	49.367	ENSNBRG00000004792	-	99	49.367	Neolamprologus_brichardi
ENSHCOG00000020309	-	100	45.977	ENSPMGG00000001672	-	99	39.773	Periophthalmus_magnuspinnatus
ENSHCOG00000020309	-	99	44.444	ENSPMGG00000011591	-	99	44.444	Periophthalmus_magnuspinnatus
ENSHCOG00000020309	-	50	46.154	ENSPLAG00000013745	-	87	47.368	Poecilia_latipinna
ENSHCOG00000020309	-	97	38.095	ENSPMEG00000004752	-	98	38.095	Poecilia_mexicana
ENSHCOG00000020309	-	54	43.750	ENSPMEG00000020864	-	83	43.750	Poecilia_mexicana
ENSHCOG00000020309	-	97	50.000	ENSPNYG00000016157	-	98	50.000	Pundamilia_nyererei
ENSHCOG00000020309	-	99	45.652	ENSSMAG00000006902	-	99	45.652	Scophthalmus_maximus
ENSHCOG00000020309	-	99	46.835	ENSSMAG00000006155	-	97	46.835	Scophthalmus_maximus
ENSHCOG00000020309	-	97	46.250	ENSSDUG00000022035	-	98	46.250	Seriola_dumerili
ENSHCOG00000020309	-	97	46.250	ENSSLDG00000025676	-	98	46.250	Seriola_lalandi_dorsalis
ENSHCOG00000020309	-	50	49.515	ENSSPAG00000007403	-	94	49.515	Stegastes_partitus
ENSHCOG00000020309	-	73	44.068	ENSTRUG00000023491	-	96	44.068	Takifugu_rubripes
ENSHCOG00000020309	-	80	51.282	ENSXMAG00000024973	-	99	51.282	Xiphophorus_maculatus