EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000020319 (Gene tree)
Gene ID
109521367
Gene Symbol
apobec2a
Alias
apo2a|zgc:110762
Full Name
C->U-editing enzyme APOBEC-2-like
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Plus strand
Length
7292 bases
Position
chrKV879730.1:369525-376816
Accession
109521367
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000016566APOBEC_NPF08210.118.8e-4811
ENSHCOP00000016566APOBEC_CPF05240.147e-2611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000024741-1832XM_019879205ENSHCOP00000016566245 (aa)XP_019734764-
Gene Model
Click here to download ENSHCOG00000020319's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000020319's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000020319apobec2a6934.302ENSHCOG00000018886aicda8834.302
ENSHCOG00000020319apobec2a9850.781ENSHCOG00000002712APOBEC29650.781
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000020319apobec2a7856.784ENSG00000124701APOBEC29952.679Homo_sapiens
ENSHCOG00000020319apobec2a8155.556ENSAPOG00000019390apobec2b7355.556Acanthochromis_polyacanthus
ENSHCOG00000020319apobec2a6954.913ENSAMEG00000004467APOBEC27153.333Ailuropoda_melanoleuca
ENSHCOG00000020319apobec2a8257.635ENSACIG00000002472APOBEC29651.429Amphilophus_citrinellus
ENSHCOG00000020319apobec2a7778.307ENSACIG00000016370apobec2a7478.307Amphilophus_citrinellus
ENSHCOG00000020319apobec2a9872.803ENSAOCG00000003291apobec2a9672.803Amphiprion_ocellaris
ENSHCOG00000020319apobec2a8156.061ENSAOCG00000023355apobec2b7356.061Amphiprion_ocellaris
ENSHCOG00000020319apobec2a9872.385ENSAPEG00000003630apobec2a9672.385Amphiprion_percula
ENSHCOG00000020319apobec2a8155.556ENSAPEG00000004591apobec2b7355.556Amphiprion_percula
ENSHCOG00000020319apobec2a10070.204ENSATEG00000000956apobec2a9881.143Anabas_testudineus
ENSHCOG00000020319apobec2a7860.000ENSATEG00000023043APOBEC29149.194Anabas_testudineus
ENSHCOG00000020319apobec2a8048.826ENSAPLG00000002895APOBEC29448.826Anas_platyrhynchos
ENSHCOG00000020319apobec2a7750.000ENSACAG00000016506APOBEC29551.955Anolis_carolinensis
ENSHCOG00000020319apobec2a7856.281ENSANAG00000026993APOBEC29952.232Aotus_nancymaae
ENSHCOG00000020319apobec2a8256.716ENSACLG00000007634APOBEC29748.473Astatotilapia_calliptera
ENSHCOG00000020319apobec2a7174.713ENSACLG00000026736-9774.713Astatotilapia_calliptera
ENSHCOG00000020319apobec2a8062.626ENSAMXG00000015966apobec2b9650.923Astyanax_mexicanus
ENSHCOG00000020319apobec2a8260.386ENSAMXG00000042992apobec2a9655.600Astyanax_mexicanus
ENSHCOG00000020319apobec2a7855.276ENSBTAG00000005974APOBEC27150.673Bos_taurus
ENSHCOG00000020319apobec2a7856.281ENSCJAG00000004063APOBEC28956.281Callithrix_jacchus
ENSHCOG00000020319apobec2a7855.276ENSCAFG00000001575APOBEC28955.276Canis_familiaris
ENSHCOG00000020319apobec2a7855.276ENSCAFG00020008306APOBEC28955.276Canis_lupus_dingo
ENSHCOG00000020319apobec2a7854.774ENSCHIG00000026348APOBEC29951.339Capra_hircus
ENSHCOG00000020319apobec2a7855.276ENSTSYG00000008206APOBEC29452.804Carlito_syrichta
ENSHCOG00000020319apobec2a7954.500ENSCAPG00000015084APOBEC28854.500Cavia_aperea
ENSHCOG00000020319apobec2a7954.500ENSCPOG00000036103APOBEC28854.500Cavia_porcellus
ENSHCOG00000020319apobec2a7856.281ENSCCAG00000033987APOBEC28956.281Cebus_capucinus
ENSHCOG00000020319apobec2a7856.281ENSCATG00000010691APOBEC28956.281Cercocebus_atys
ENSHCOG00000020319apobec2a7955.000ENSCLAG00000013817APOBEC28855.000Chinchilla_lanigera
ENSHCOG00000020319apobec2a7856.281ENSCSAG00000011177APOBEC28956.281Chlorocebus_sabaeus
ENSHCOG00000020319apobec2a7155.000ENSCHOG00000008930APOBEC210055.000Choloepus_hoffmanni
ENSHCOG00000020319apobec2a7554.301ENSCPBG00000017469APOBEC28554.545Chrysemys_picta_bellii
ENSHCOG00000020319apobec2a7855.779ENSCANG00000035072APOBEC28955.779Colobus_angolensis_palliatus
ENSHCOG00000020319apobec2a7856.281ENSCGRG00001014983Apobec28956.281Cricetulus_griseus_chok1gshd
ENSHCOG00000020319apobec2a7856.281ENSCGRG00000007835Apobec28956.281Cricetulus_griseus_crigri
ENSHCOG00000020319apobec2a10073.878ENSCSEG00000020201apobec2a9773.878Cynoglossus_semilaevis
ENSHCOG00000020319apobec2a7757.447ENSCSEG00000000690-7555.721Cynoglossus_semilaevis
ENSHCOG00000020319apobec2a8158.291ENSCVAG00000012342apobec2b9749.237Cyprinodon_variegatus
ENSHCOG00000020319apobec2a9960.246ENSDARG00000018881apobec2a8859.836Danio_rerio
ENSHCOG00000020319apobec2a8962.162ENSDARG00000113992apobec2b9555.000Danio_rerio
ENSHCOG00000020319apobec2a7736.585ENSDNOG00000033914APOBEC28936.967Dasypus_novemcinctus
ENSHCOG00000020319apobec2a7756.995ENSDORG00000006447Apobec28456.995Dipodomys_ordii
ENSHCOG00000020319apobec2a7854.774ENSETEG00000000624APOBEC29950.218Echinops_telfairi
ENSHCOG00000020319apobec2a6758.084ENSEASG00005002937APOBEC28758.084Equus_asinus_asinus
ENSHCOG00000020319apobec2a7855.779ENSECAG00000006576APOBEC28955.779Equus_caballus
ENSHCOG00000020319apobec2a7754.922ENSEEUG00000006046APOBEC29949.561Erinaceus_europaeus
ENSHCOG00000020319apobec2a7774.603ENSELUG00000003736apobec2a6974.112Esox_lucius
ENSHCOG00000020319apobec2a7853.769ENSFCAG00000004108APOBEC28953.769Felis_catus
ENSHCOG00000020319apobec2a8140.376ENSFALG00000003910APOBEC29640.376Ficedula_albicollis
ENSHCOG00000020319apobec2a7756.477ENSFDAG00000006015APOBEC29951.339Fukomys_damarensis
ENSHCOG00000020319apobec2a8157.071ENSFHEG00000005492apobec2b8457.071Fundulus_heteroclitus
ENSHCOG00000020319apobec2a8055.838ENSGMOG00000006819apobec2b9349.587Gadus_morhua
ENSHCOG00000020319apobec2a7177.143ENSGMOG00000007028apobec2a10077.143Gadus_morhua
ENSHCOG00000020319apobec2a8149.533ENSGALG00000003226APOBEC29649.533Gallus_gallus
ENSHCOG00000020319apobec2a8257.500ENSGAFG00000007634apobec2b6557.500Gambusia_affinis
ENSHCOG00000020319apobec2a7858.421ENSGACG00000009663apobec2b9953.138Gasterosteus_aculeatus
ENSHCOG00000020319apobec2a7782.447ENSGACG00000011671apobec2a10082.447Gasterosteus_aculeatus
ENSHCOG00000020319apobec2a7554.301ENSGAGG00000010347APOBEC28554.545Gopherus_agassizii
ENSHCOG00000020319apobec2a7856.784ENSGGOG00000001099APOBEC29952.402Gorilla_gorilla
ENSHCOG00000020319apobec2a9966.803ENSHBUG00000015890apobec2a9666.803Haplochromis_burtoni
ENSHCOG00000020319apobec2a8257.214ENSHBUG00000005993apobec2b9748.855Haplochromis_burtoni
ENSHCOG00000020319apobec2a7756.477ENSHGLG00000017169APOBEC28556.477Heterocephalus_glaber_female
ENSHCOG00000020319apobec2a7756.477ENSHGLG00100019442APOBEC28556.477Heterocephalus_glaber_male
ENSHCOG00000020319apobec2a8064.824ENSIPUG00000013784Apobec28759.402Ictalurus_punctatus
ENSHCOG00000020319apobec2a8065.000ENSIPUG00000017355apobec2a6657.430Ictalurus_punctatus
ENSHCOG00000020319apobec2a7756.995ENSSTOG00000023643APOBEC29951.570Ictidomys_tridecemlineatus
ENSHCOG00000020319apobec2a7853.769ENSJJAG00000009733Apobec28953.769Jaculus_jaculus
ENSHCOG00000020319apobec2a8056.345ENSKMAG00000020631apobec2b9549.219Kryptolebias_marmoratus
ENSHCOG00000020319apobec2a10072.653ENSLBEG00000025214apobec2a9772.653Labrus_bergylta
ENSHCOG00000020319apobec2a9450.000ENSLBEG00000009422-8547.967Labrus_bergylta
ENSHCOG00000020319apobec2a8056.853ENSLACG00000015985APOBEC28656.853Latimeria_chalumnae
ENSHCOG00000020319apobec2a8163.000ENSLOCG00000012415apobec2b8854.694Lepisosteus_oculatus
ENSHCOG00000020319apobec2a7857.286ENSLAFG00000016563APOBEC29952.679Loxodonta_africana
ENSHCOG00000020319apobec2a7856.281ENSMFAG00000044645APOBEC28956.281Macaca_fascicularis
ENSHCOG00000020319apobec2a7856.281ENSMMUG00000021171APOBEC28956.281Macaca_mulatta
ENSHCOG00000020319apobec2a7856.281ENSMNEG00000045497APOBEC28956.281Macaca_nemestrina
ENSHCOG00000020319apobec2a7856.281ENSMLEG00000028328APOBEC28956.281Mandrillus_leucophaeus
ENSHCOG00000020319apobec2a7857.368ENSMAMG00000007926APOBEC26957.368Mastacembelus_armatus
ENSHCOG00000020319apobec2a9976.955ENSMAMG00000023685apobec2a9476.955Mastacembelus_armatus
ENSHCOG00000020319apobec2a9948.473ENSMZEG00005027159APOBEC29748.473Maylandia_zebra
ENSHCOG00000020319apobec2a9369.737ENSMZEG00005005240-8877.647Maylandia_zebra
ENSHCOG00000020319apobec2a8150.000ENSMGAG00000010173APOBEC29453.073Meleagris_gallopavo
ENSHCOG00000020319apobec2a7856.281ENSMAUG00000011016Apobec28956.281Mesocricetus_auratus
ENSHCOG00000020319apobec2a7856.281ENSMICG00000043339APOBEC28956.281Microcebus_murinus
ENSHCOG00000020319apobec2a7856.784ENSMOCG00000001904Apobec29952.018Microtus_ochrogaster
ENSHCOG00000020319apobec2a9350.877ENSMMOG00000008681apobec2b7156.316Mola_mola
ENSHCOG00000020319apobec2a7854.271ENSMODG00000013090APOBEC29054.271Monodelphis_domestica
ENSHCOG00000020319apobec2a9848.387ENSMALG00000013779APOBEC29648.387Monopterus_albus
ENSHCOG00000020319apobec2a9971.721ENSMALG00000020523apobec2a9771.721Monopterus_albus
ENSHCOG00000020319apobec2a7857.000MGP_CAROLIEiJ_G0021727Apobec29952.232Mus_caroli
ENSHCOG00000020319apobec2a7857.000ENSMUSG00000040694Apobec29952.232Mus_musculus
ENSHCOG00000020319apobec2a7857.000MGP_PahariEiJ_G0020716Apobec29952.232Mus_pahari
ENSHCOG00000020319apobec2a7854.271ENSMPUG00000013691APOBEC29650.224Mustela_putorius_furo
ENSHCOG00000020319apobec2a7853.769ENSMLUG00000011327APOBEC28753.769Myotis_lucifugus
ENSHCOG00000020319apobec2a7856.281ENSNGAG00000013717Apobec28956.281Nannospalax_galili
ENSHCOG00000020319apobec2a8156.500ENSNBRG00000018806apobec2b8648.092Neolamprologus_brichardi
ENSHCOG00000020319apobec2a7778.836ENSNBRG00000021776apobec2a9665.574Neolamprologus_brichardi
ENSHCOG00000020319apobec2a7856.784ENSNLEG00000005057APOBEC29952.679Nomascus_leucogenys
ENSHCOG00000020319apobec2a7854.774ENSMEUG00000011623APOBEC29054.774Notamacropus_eugenii
ENSHCOG00000020319apobec2a8054.502ENSOPRG00000014808APOBEC29951.502Ochotona_princeps
ENSHCOG00000020319apobec2a7755.959ENSODEG00000016183APOBEC28455.959Octodon_degus
ENSHCOG00000020319apobec2a8157.500ENSONIG00000012289apobec2b9749.237Oreochromis_niloticus
ENSHCOG00000020319apobec2a9968.852ENSONIG00000004644-9668.852Oreochromis_niloticus
ENSHCOG00000020319apobec2a6754.167ENSOANG00000000824APOBEC29852.778Ornithorhynchus_anatinus
ENSHCOG00000020319apobec2a8153.991ENSOCUG00000028008APOBEC29951.082Oryctolagus_cuniculus
ENSHCOG00000020319apobec2a8159.091ENSORLG00000022372APOBEC28952.101Oryzias_latipes
ENSHCOG00000020319apobec2a9964.198ENSORLG00000010752apobec2a9664.198Oryzias_latipes
ENSHCOG00000020319apobec2a8159.596ENSORLG00020006164APOBEC28952.521Oryzias_latipes_hni
ENSHCOG00000020319apobec2a9964.198ENSORLG00020004153apobec2a9664.198Oryzias_latipes_hni
ENSHCOG00000020319apobec2a9964.198ENSORLG00015021781apobec2a9664.198Oryzias_latipes_hsok
ENSHCOG00000020319apobec2a8159.596ENSORLG00015022089-9749.231Oryzias_latipes_hsok
ENSHCOG00000020319apobec2a9962.551ENSOMEG00000001311apobec2a9662.551Oryzias_melastigma
ENSHCOG00000020319apobec2a9353.712ENSOMEG00000015449APOBEC29752.500Oryzias_melastigma
ENSHCOG00000020319apobec2a7857.789ENSOGAG00000002632APOBEC28957.789Otolemur_garnettii
ENSHCOG00000020319apobec2a7854.774ENSOARG00000000820APOBEC29951.339Ovis_aries
ENSHCOG00000020319apobec2a7856.784ENSPPAG00000035598APOBEC29952.402Pan_paniscus
ENSHCOG00000020319apobec2a7853.769ENSPPRG00000008530APOBEC28953.769Panthera_pardus
ENSHCOG00000020319apobec2a7753.886ENSPTIG00000011084APOBEC28653.886Panthera_tigris_altaica
ENSHCOG00000020319apobec2a7856.784ENSPTRG00000029679APOBEC29952.402Pan_troglodytes
ENSHCOG00000020319apobec2a7856.281ENSPANG00000007121APOBEC28956.281Papio_anubis
ENSHCOG00000020319apobec2a9959.504ENSPKIG00000005395apobec2a9459.504Paramormyrops_kingsleyae
ENSHCOG00000020319apobec2a8964.840ENSPKIG00000004741apobec2b7964.840Paramormyrops_kingsleyae
ENSHCOG00000020319apobec2a7554.301ENSPSIG00000013480APOBEC29051.691Pelodiscus_sinensis
ENSHCOG00000020319apobec2a8157.286ENSPMGG00000002686APOBEC25957.286Periophthalmus_magnuspinnatus
ENSHCOG00000020319apobec2a9970.902ENSPMGG00000004044apobec2a9670.902Periophthalmus_magnuspinnatus
ENSHCOG00000020319apobec2a7856.281ENSPEMG00000005724Apobec28956.281Peromyscus_maniculatus_bairdii
ENSHCOG00000020319apobec2a8257.000ENSPFOG00000001216apobec2b9049.587Poecilia_formosa
ENSHCOG00000020319apobec2a8256.500ENSPLAG00000002074apobec2b9650.820Poecilia_latipinna
ENSHCOG00000020319apobec2a8257.000ENSPMEG00000017537apobec2b9049.587Poecilia_mexicana
ENSHCOG00000020319apobec2a8257.500ENSPREG00000020060apobec2b7850.000Poecilia_reticulata
ENSHCOG00000020319apobec2a7856.281ENSPPYG00000016586APOBEC29952.232Pongo_abelii
ENSHCOG00000020319apobec2a7656.021ENSPCAG00000011433APOBEC210056.021Procavia_capensis
ENSHCOG00000020319apobec2a7857.789ENSPCOG00000026935APOBEC28957.789Propithecus_coquereli
ENSHCOG00000020319apobec2a7854.271ENSPVAG00000008316APOBEC29949.561Pteropus_vampyrus
ENSHCOG00000020319apobec2a8256.716ENSPNYG00000016747apobec2b9748.473Pundamilia_nyererei
ENSHCOG00000020319apobec2a9958.268ENSPNAG00000010382apobec2a9558.268Pygocentrus_nattereri
ENSHCOG00000020319apobec2a8262.381ENSPNAG00000013666apobec2b9652.612Pygocentrus_nattereri
ENSHCOG00000020319apobec2a7855.779ENSRNOG00000012303Apobec29951.121Rattus_norvegicus
ENSHCOG00000020319apobec2a7855.779ENSRBIG00000044756APOBEC28955.779Rhinopithecus_bieti
ENSHCOG00000020319apobec2a7855.779ENSRROG00000030082APOBEC28955.779Rhinopithecus_roxellana
ENSHCOG00000020319apobec2a7856.281ENSSBOG00000028496APOBEC28956.281Saimiri_boliviensis_boliviensis
ENSHCOG00000020319apobec2a7853.769ENSSHAG00000017771APOBEC29053.769Sarcophilus_harrisii
ENSHCOG00000020319apobec2a6958.480ENSSFOG00015005437-7158.480Scleropages_formosus
ENSHCOG00000020319apobec2a8664.623ENSSFOG00015022920apobec27764.623Scleropages_formosus
ENSHCOG00000020319apobec2a9971.605ENSSMAG00000001011apobec2a7171.605Scophthalmus_maximus
ENSHCOG00000020319apobec2a7856.316ENSSMAG00000005110APOBEC27155.276Scophthalmus_maximus
ENSHCOG00000020319apobec2a10073.469ENSSDUG00000007013apobec2a9773.469Seriola_dumerili
ENSHCOG00000020319apobec2a7858.947ENSSDUG00000014543apobec2b7058.947Seriola_dumerili
ENSHCOG00000020319apobec2a10072.245ENSSLDG00000020199apobec2a9772.245Seriola_lalandi_dorsalis
ENSHCOG00000020319apobec2a7858.947ENSSLDG00000003321apobec2b7058.947Seriola_lalandi_dorsalis
ENSHCOG00000020319apobec2a7151.099ENSSPUG00000010839APOBEC28750.276Sphenodon_punctatus
ENSHCOG00000020319apobec2a8157.071ENSSPAG00000005253apobec2b7357.071Stegastes_partitus
ENSHCOG00000020319apobec2a9871.250ENSSPAG00000016299-9671.250Stegastes_partitus
ENSHCOG00000020319apobec2a7855.276ENSSSCG00000036018APOBEC28955.276Sus_scrofa
ENSHCOG00000020319apobec2a8047.170ENSTGUG00000018533APOBEC29248.529Taeniopygia_guttata
ENSHCOG00000020319apobec2a9946.311ENSTRUG00000012839apobec2b8946.311Takifugu_rubripes
ENSHCOG00000020319apobec2a10070.204ENSTRUG00000009123apobec2a9770.204Takifugu_rubripes
ENSHCOG00000020319apobec2a9946.304ENSTNIG00000015038apobec2b9746.304Tetraodon_nigroviridis
ENSHCOG00000020319apobec2a7855.779ENSTBEG00000003553APOBEC29951.121Tupaia_belangeri
ENSHCOG00000020319apobec2a7654.737ENSTTRG00000013392APOBEC28554.737Tursiops_truncatus
ENSHCOG00000020319apobec2a7854.271ENSUAMG00000027667APOBEC28754.271Ursus_americanus
ENSHCOG00000020319apobec2a7855.276ENSVVUG00000026617APOBEC28955.276Vulpes_vulpes
ENSHCOG00000020319apobec2a8045.972ENSXETG00000008007apobec28945.972Xenopus_tropicalis
ENSHCOG00000020319apobec2a8057.360ENSXCOG00000007398apobec2b9649.388Xiphophorus_couchianus
ENSHCOG00000020319apobec2a8057.360ENSXMAG00000008134apobec2b7357.000Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us