EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000020361 (Gene tree)
Gene ID: 109520575
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3589 bases
Position: chrKV880096.1:1174481-1178069
Accession: 109520575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000016607	RRM_1	PF00076.22	3.8e-43	1	4
ENSHCOP00000016607	RRM_1	PF00076.22	3.8e-43	2	4
ENSHCOP00000016607	RRM_1	PF00076.22	3.8e-43	3	4
ENSHCOP00000016607	RRM_1	PF00076.22	3.8e-43	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000024789	-	1510	XM_019877903	ENSHCOP00000016607	425 (aa)	XP_019733462	-

Gene Model

Click here to download ENSHCOG00000020361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000020361's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000020361	-	85	33.571	ENSHCOG00000013502	pabpc1a	55	33.571
ENSHCOG00000020361	-	89	39.370	ENSHCOG00000010234	ncl	54	38.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000020361	-	93	44.337	ENSACIG00000021941	-	88	44.337	Amphilophus_citrinellus
ENSHCOG00000020361	-	92	42.677	ENSACLG00000009613	-	93	42.677	Astatotilapia_calliptera
ENSHCOG00000020361	-	94	47.512	ENSCSEG00000017388	-	76	47.512	Cynoglossus_semilaevis
ENSHCOG00000020361	-	96	48.712	ENSFHEG00000017265	-	91	48.712	Fundulus_heteroclitus
ENSHCOG00000020361	-	89	38.583	ENSGMOG00000017831	-	98	39.695	Gadus_morhua
ENSHCOG00000020361	-	98	46.099	ENSGAFG00000018408	-	85	46.556	Gambusia_affinis
ENSHCOG00000020361	-	90	42.597	ENSHBUG00000006683	-	92	42.597	Haplochromis_burtoni
ENSHCOG00000020361	-	98	51.905	ENSKMAG00000003154	-	90	51.905	Kryptolebias_marmoratus
ENSHCOG00000020361	-	90	42.894	ENSMZEG00005005300	-	92	42.894	Maylandia_zebra
ENSHCOG00000020361	-	92	48.974	ENSMMOG00000018095	-	89	48.974	Mola_mola
ENSHCOG00000020361	-	89	48.322	ENSMALG00000006207	-	69	48.322	Monopterus_albus
ENSHCOG00000020361	-	91	43.557	ENSPMGG00000013705	-	93	43.557	Periophthalmus_magnuspinnatus
ENSHCOG00000020361	-	94	46.766	ENSPFOG00000016767	-	93	45.972	Poecilia_formosa
ENSHCOG00000020361	-	92	49.620	ENSPLAG00000000597	-	79	49.620	Poecilia_latipinna
ENSHCOG00000020361	-	92	48.744	ENSPMEG00000004046	-	80	48.744	Poecilia_mexicana
ENSHCOG00000020361	-	94	47.794	ENSPREG00000007170	-	88	47.281	Poecilia_reticulata
ENSHCOG00000020361	-	90	43.928	ENSPNYG00000000391	-	92	43.928	Pundamilia_nyererei
ENSHCOG00000020361	-	91	48.593	ENSTRUG00000023880	-	79	48.593	Takifugu_rubripes
ENSHCOG00000020361	-	94	46.683	ENSXMAG00000004403	-	83	47.044	Xiphophorus_maculatus