EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000020440 (Gene tree)
Gene ID: 109527353
Gene Symbol: -
Alias: -
Full Name: transportin-2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 11686 bases
Position: chrKV880294.1:737268-748953
Accession: 109527353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000016638	IBN_N	PF03810.19	4.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000024821	-	2670	XM_019889230	ENSHCOP00000016638	889 (aa)	XP_019744789	UPI00094EFD03

Gene Model

Click here to download ENSHCOG00000020440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000020440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000020440	-	100	93.138	ENSHCOG00000005914	tnpo2	100	93.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000020440	-	100	92.913	ENSG00000105576	TNPO2	100	92.913	Homo_sapiens
ENSHCOG00000020440	-	82	94.207	ENSAPOG00000013185	-	96	94.207	Acanthochromis_polyacanthus
ENSHCOG00000020440	-	100	99.213	ENSAPOG00000009339	TNPO2	100	99.213	Acanthochromis_polyacanthus
ENSHCOG00000020440	-	100	90.323	ENSAMEG00000012123	TNPO2	100	90.323	Ailuropoda_melanoleuca
ENSHCOG00000020440	-	87	98.964	ENSACIG00000009586	-	100	98.964	Amphilophus_citrinellus
ENSHCOG00000020440	-	87	95.460	ENSACIG00000007518	tnpo2	98	95.090	Amphilophus_citrinellus
ENSHCOG00000020440	-	100	99.213	ENSAOCG00000010152	-	100	99.213	Amphiprion_ocellaris
ENSHCOG00000020440	-	100	95.276	ENSAOCG00000010374	tnpo2	100	95.276	Amphiprion_ocellaris
ENSHCOG00000020440	-	100	95.276	ENSAPEG00000008429	tnpo2	100	95.276	Amphiprion_percula
ENSHCOG00000020440	-	100	99.213	ENSAPEG00000013268	-	100	99.213	Amphiprion_percula
ENSHCOG00000020440	-	100	99.213	ENSATEG00000019171	-	100	99.213	Anabas_testudineus
ENSHCOG00000020440	-	100	94.826	ENSATEG00000024761	TNPO2	100	94.826	Anabas_testudineus
ENSHCOG00000020440	-	100	93.363	ENSACAG00000003576	TNPO2	100	93.251	Anolis_carolinensis
ENSHCOG00000020440	-	100	92.801	ENSANAG00000036645	TNPO2	100	92.801	Aotus_nancymaae
ENSHCOG00000020440	-	100	95.051	ENSACLG00000001853	tnpo2	100	95.051	Astatotilapia_calliptera
ENSHCOG00000020440	-	100	93.026	ENSACLG00000020672	-	100	93.026	Astatotilapia_calliptera
ENSHCOG00000020440	-	100	93.681	ENSAMXG00000010246	tnpo2	100	93.681	Astyanax_mexicanus
ENSHCOG00000020440	-	100	92.801	ENSBTAG00000011811	TNPO2	100	92.801	Bos_taurus
ENSHCOG00000020440	-	100	91.880	ENSCJAG00000005096	TNPO2	100	91.880	Callithrix_jacchus
ENSHCOG00000020440	-	100	92.913	ENSCAFG00000017226	TNPO2	85	93.026	Canis_familiaris
ENSHCOG00000020440	-	100	93.026	ENSCAFG00020005115	TNPO2	100	93.026	Canis_lupus_dingo
ENSHCOG00000020440	-	100	88.209	ENSCHIG00000011718	TNPO2	100	87.987	Capra_hircus
ENSHCOG00000020440	-	100	92.913	ENSTSYG00000003828	TNPO2	100	92.913	Carlito_syrichta
ENSHCOG00000020440	-	93	90.725	ENSCAPG00000015700	TNPO2	96	90.725	Cavia_aperea
ENSHCOG00000020440	-	100	92.688	ENSCPOG00000007033	TNPO2	100	92.688	Cavia_porcellus
ENSHCOG00000020440	-	100	92.913	ENSCCAG00000024574	TNPO2	100	92.913	Cebus_capucinus
ENSHCOG00000020440	-	100	91.880	ENSCATG00000042599	TNPO2	100	91.880	Cercocebus_atys
ENSHCOG00000020440	-	100	92.688	ENSCLAG00000013442	TNPO2	100	92.688	Chinchilla_lanigera
ENSHCOG00000020440	-	100	92.913	ENSCSAG00000006597	TNPO2	100	92.913	Chlorocebus_sabaeus
ENSHCOG00000020440	-	100	93.588	ENSCPBG00000023892	TNPO2	100	93.588	Chrysemys_picta_bellii
ENSHCOG00000020440	-	96	93.116	ENSCANG00000027834	TNPO2	98	93.116	Colobus_angolensis_palliatus
ENSHCOG00000020440	-	100	91.991	ENSCGRG00001015917	Tnpo2	100	91.991	Cricetulus_griseus_chok1gshd
ENSHCOG00000020440	-	100	93.026	ENSCGRG00000012601	Tnpo2	100	93.026	Cricetulus_griseus_crigri
ENSHCOG00000020440	-	87	95.995	ENSCSEG00000011477	-	100	95.995	Cynoglossus_semilaevis
ENSHCOG00000020440	-	100	91.001	ENSCSEG00000012923	tnpo2	100	91.001	Cynoglossus_semilaevis
ENSHCOG00000020440	-	100	93.258	ENSCVAG00000002750	tnpo2	100	93.258	Cyprinodon_variegatus
ENSHCOG00000020440	-	100	98.988	ENSCVAG00000001908	TNPO2	100	98.988	Cyprinodon_variegatus
ENSHCOG00000020440	-	100	91.114	ENSDARG00000038239	tnpo2	100	91.114	Danio_rerio
ENSHCOG00000020440	-	88	83.546	ENSDNOG00000043264	TNPO2	84	83.673	Dasypus_novemcinctus
ENSHCOG00000020440	-	100	86.333	ENSDORG00000014993	Tnpo2	100	90.511	Dipodomys_ordii
ENSHCOG00000020440	-	100	73.043	FBgn0024921	Tnpo	100	72.931	Drosophila_melanogaster
ENSHCOG00000020440	-	91	83.920	ENSETEG00000014785	TNPO2	92	83.920	Echinops_telfairi
ENSHCOG00000020440	-	100	92.913	ENSEASG00005004160	TNPO2	100	92.913	Equus_asinus_asinus
ENSHCOG00000020440	-	100	92.913	ENSECAG00000013673	TNPO2	100	92.913	Equus_caballus
ENSHCOG00000020440	-	100	94.562	ENSELUG00000008680	tnpo2	100	94.562	Esox_lucius
ENSHCOG00000020440	-	80	94.830	ENSELUG00000016542	-	99	85.915	Esox_lucius
ENSHCOG00000020440	-	100	91.880	ENSFCAG00000000467	TNPO2	100	91.880	Felis_catus
ENSHCOG00000020440	-	100	92.688	ENSFDAG00000021543	TNPO2	100	92.688	Fukomys_damarensis
ENSHCOG00000020440	-	100	93.596	ENSFHEG00000016501	tnpo2	100	93.596	Fundulus_heteroclitus
ENSHCOG00000020440	-	97	98.372	ENSFHEG00000009734	TNPO2	99	98.372	Fundulus_heteroclitus
ENSHCOG00000020440	-	80	97.222	ENSGMOG00000014237	-	90	97.222	Gadus_morhua
ENSHCOG00000020440	-	100	86.689	ENSGMOG00000009021	tnpo2	100	86.689	Gadus_morhua
ENSHCOG00000020440	-	100	94.045	ENSGAFG00000018993	tnpo2	100	94.045	Gambusia_affinis
ENSHCOG00000020440	-	100	98.875	ENSGAFG00000010401	TNPO2	100	98.875	Gambusia_affinis
ENSHCOG00000020440	-	100	93.588	ENSGAGG00000010150	TNPO2	100	93.588	Gopherus_agassizii
ENSHCOG00000020440	-	100	99.100	ENSHBUG00000018317	-	100	99.100	Haplochromis_burtoni
ENSHCOG00000020440	-	100	95.051	ENSHBUG00000014849	tnpo2	100	95.051	Haplochromis_burtoni
ENSHCOG00000020440	-	100	92.576	ENSHGLG00000016928	TNPO2	100	92.576	Heterocephalus_glaber_female
ENSHCOG00000020440	-	100	90.990	ENSHGLG00100009938	TNPO2	100	90.990	Heterocephalus_glaber_male
ENSHCOG00000020440	-	100	96.625	ENSIPUG00000006884	TNPO2	99	96.625	Ictalurus_punctatus
ENSHCOG00000020440	-	100	94.826	ENSIPUG00000005768	tnpo2	100	94.826	Ictalurus_punctatus
ENSHCOG00000020440	-	100	93.138	ENSSTOG00000006952	TNPO2	100	93.138	Ictidomys_tridecemlineatus
ENSHCOG00000020440	-	100	91.880	ENSJJAG00000016820	Tnpo2	100	91.880	Jaculus_jaculus
ENSHCOG00000020440	-	100	98.875	ENSKMAG00000018430	TNPO2	100	98.875	Kryptolebias_marmoratus
ENSHCOG00000020440	-	100	91.451	ENSKMAG00000021274	TNPO2	100	91.451	Kryptolebias_marmoratus
ENSHCOG00000020440	-	100	95.501	ENSLBEG00000026241	tnpo2	100	95.501	Labrus_bergylta
ENSHCOG00000020440	-	100	99.213	ENSLBEG00000005301	-	100	99.213	Labrus_bergylta
ENSHCOG00000020440	-	100	90.214	ENSLACG00000012322	TNPO2	99	90.214	Latimeria_chalumnae
ENSHCOG00000020440	-	100	95.726	ENSLOCG00000006178	tnpo2	99	95.726	Lepisosteus_oculatus
ENSHCOG00000020440	-	100	91.880	ENSLAFG00000003661	TNPO2	100	91.880	Loxodonta_africana
ENSHCOG00000020440	-	100	91.880	ENSMFAG00000037531	TNPO2	100	91.880	Macaca_fascicularis
ENSHCOG00000020440	-	100	92.913	ENSMMUG00000005684	TNPO2	100	92.913	Macaca_mulatta
ENSHCOG00000020440	-	100	92.913	ENSMNEG00000041024	TNPO2	100	92.913	Macaca_nemestrina
ENSHCOG00000020440	-	97	91.234	ENSMLEG00000018391	TNPO2	98	92.042	Mandrillus_leucophaeus
ENSHCOG00000020440	-	100	93.341	ENSMAMG00000023658	tnpo2	100	93.341	Mastacembelus_armatus
ENSHCOG00000020440	-	100	99.213	ENSMAMG00000011862	-	100	99.213	Mastacembelus_armatus
ENSHCOG00000020440	-	100	95.051	ENSMZEG00005023965	tnpo2	100	95.051	Maylandia_zebra
ENSHCOG00000020440	-	100	90.807	ENSMZEG00005011298	TNPO2	100	91.124	Maylandia_zebra
ENSHCOG00000020440	-	100	99.100	ENSMZEG00005007408	-	100	99.100	Maylandia_zebra
ENSHCOG00000020440	-	100	92.913	ENSMICG00000016153	TNPO2	100	92.913	Microcebus_murinus
ENSHCOG00000020440	-	100	93.026	ENSMOCG00000016489	Tnpo2	100	93.026	Microtus_ochrogaster
ENSHCOG00000020440	-	87	89.793	ENSMMOG00000005063	TNPO2	93	89.793	Mola_mola
ENSHCOG00000020440	-	88	97.823	ENSMMOG00000021390	TNPO2	99	97.823	Mola_mola
ENSHCOG00000020440	-	100	92.881	ENSMODG00000006888	TNPO2	100	92.881	Monodelphis_domestica
ENSHCOG00000020440	-	100	93.926	ENSMALG00000004721	tnpo2	100	93.926	Monopterus_albus
ENSHCOG00000020440	-	100	98.763	ENSMALG00000006232	TNPO2	100	98.763	Monopterus_albus
ENSHCOG00000020440	-	100	93.026	MGP_CAROLIEiJ_G0031326	Tnpo2	100	93.026	Mus_caroli
ENSHCOG00000020440	-	100	93.026	ENSMUSG00000031691	Tnpo2	100	93.026	Mus_musculus
ENSHCOG00000020440	-	100	93.026	MGP_PahariEiJ_G0022931	Tnpo2	100	93.026	Mus_pahari
ENSHCOG00000020440	-	100	93.026	MGP_SPRETEiJ_G0032445	Tnpo2	100	93.026	Mus_spretus
ENSHCOG00000020440	-	100	93.026	ENSMPUG00000004663	TNPO2	100	93.026	Mustela_putorius_furo
ENSHCOG00000020440	-	96	93.116	ENSMLUG00000012669	TNPO2	100	93.116	Myotis_lucifugus
ENSHCOG00000020440	-	100	93.026	ENSNGAG00000000650	Tnpo2	100	93.026	Nannospalax_galili
ENSHCOG00000020440	-	100	99.100	ENSNBRG00000023849	TNPO2	100	99.100	Neolamprologus_brichardi
ENSHCOG00000020440	-	100	89.764	ENSNBRG00000006242	TNPO2	100	89.764	Neolamprologus_brichardi
ENSHCOG00000020440	-	100	82.889	ENSNLEG00000012758	TNPO2	100	82.889	Nomascus_leucogenys
ENSHCOG00000020440	-	100	87.208	ENSMEUG00000016658	TNPO2	100	87.208	Notamacropus_eugenii
ENSHCOG00000020440	-	100	92.688	ENSODEG00000009670	TNPO2	100	92.688	Octodon_degus
ENSHCOG00000020440	-	100	95.163	ENSONIG00000002147	tnpo2	100	95.163	Oreochromis_niloticus
ENSHCOG00000020440	-	100	98.107	ENSONIG00000017706	-	100	98.107	Oreochromis_niloticus
ENSHCOG00000020440	-	100	93.026	ENSOANG00000010051	TNPO2	100	93.026	Ornithorhynchus_anatinus
ENSHCOG00000020440	-	91	92.622	ENSOCUG00000008251	TNPO2	90	92.779	Oryctolagus_cuniculus
ENSHCOG00000020440	-	56	98.600	ENSORLG00000011763	TNPO2	99	98.600	Oryzias_latipes
ENSHCOG00000020440	-	100	94.938	ENSORLG00000010363	tnpo2	100	94.938	Oryzias_latipes
ENSHCOG00000020440	-	100	94.938	ENSORLG00020015785	tnpo2	100	94.938	Oryzias_latipes_hni
ENSHCOG00000020440	-	56	98.400	ENSORLG00020001020	TNPO2	99	98.400	Oryzias_latipes_hni
ENSHCOG00000020440	-	56	98.600	ENSORLG00015003941	TNPO2	99	98.600	Oryzias_latipes_hsok
ENSHCOG00000020440	-	100	94.151	ENSORLG00015005489	tnpo2	100	94.151	Oryzias_latipes_hsok
ENSHCOG00000020440	-	100	98.763	ENSOMEG00000013440	TNPO2	100	98.763	Oryzias_melastigma
ENSHCOG00000020440	-	100	94.713	ENSOMEG00000014877	TNPO2	100	94.713	Oryzias_melastigma
ENSHCOG00000020440	-	100	92.013	ENSOARG00000011717	TNPO2	94	91.034	Ovis_aries
ENSHCOG00000020440	-	100	91.880	ENSPPAG00000019494	TNPO2	100	91.880	Pan_paniscus
ENSHCOG00000020440	-	100	91.880	ENSPPRG00000003075	TNPO2	100	91.880	Panthera_pardus
ENSHCOG00000020440	-	85	86.207	ENSPTIG00000011213	TNPO2	97	86.207	Panthera_tigris_altaica
ENSHCOG00000020440	-	100	91.880	ENSPTRG00000010535	TNPO2	100	91.880	Pan_troglodytes
ENSHCOG00000020440	-	100	91.880	ENSPANG00000016857	TNPO2	100	91.880	Papio_anubis
ENSHCOG00000020440	-	100	94.263	ENSPKIG00000004824	tnpo2	100	94.263	Paramormyrops_kingsleyae
ENSHCOG00000020440	-	97	92.299	ENSPKIG00000002899	-	99	92.780	Paramormyrops_kingsleyae
ENSHCOG00000020440	-	100	89.922	ENSPSIG00000010215	TNPO2	100	89.812	Pelodiscus_sinensis
ENSHCOG00000020440	-	87	98.444	ENSPMGG00000016459	TNPO2	98	98.444	Periophthalmus_magnuspinnatus
ENSHCOG00000020440	-	56	94.800	ENSPMGG00000022850	tnpo2	99	93.800	Periophthalmus_magnuspinnatus
ENSHCOG00000020440	-	100	91.991	ENSPEMG00000018702	Tnpo2	100	91.991	Peromyscus_maniculatus_bairdii
ENSHCOG00000020440	-	99	91.573	ENSPCIG00000015327	TNPO2	95	93.932	Phascolarctos_cinereus
ENSHCOG00000020440	-	100	99.213	ENSPFOG00000005417	TNPO2	100	99.213	Poecilia_formosa
ENSHCOG00000020440	-	100	94.045	ENSPFOG00000012466	tnpo2	100	94.045	Poecilia_formosa
ENSHCOG00000020440	-	100	93.933	ENSPLAG00000018842	tnpo2	100	93.933	Poecilia_latipinna
ENSHCOG00000020440	-	93	99.156	ENSPLAG00000010687	TNPO2	97	99.156	Poecilia_latipinna
ENSHCOG00000020440	-	100	99.213	ENSPMEG00000014011	-	100	99.213	Poecilia_mexicana
ENSHCOG00000020440	-	100	93.933	ENSPMEG00000006069	tnpo2	100	93.933	Poecilia_mexicana
ENSHCOG00000020440	-	100	99.213	ENSPREG00000000415	TNPO2	99	99.213	Poecilia_reticulata
ENSHCOG00000020440	-	100	93.596	ENSPREG00000001121	TNPO2	100	93.596	Poecilia_reticulata
ENSHCOG00000020440	-	100	92.913	ENSPPYG00000009602	TNPO2	100	92.913	Pongo_abelii
ENSHCOG00000020440	-	100	83.592	ENSPCAG00000014916	TNPO2	100	83.370	Procavia_capensis
ENSHCOG00000020440	-	100	92.913	ENSPCOG00000018386	TNPO2	100	92.913	Propithecus_coquereli
ENSHCOG00000020440	-	100	88.815	ENSPVAG00000013411	TNPO2	100	88.815	Pteropus_vampyrus
ENSHCOG00000020440	-	100	95.051	ENSPNYG00000013748	tnpo2	100	95.051	Pundamilia_nyererei
ENSHCOG00000020440	-	100	93.026	ENSPNYG00000001235	-	100	93.026	Pundamilia_nyererei
ENSHCOG00000020440	-	100	97.413	ENSPNAG00000026208	-	100	97.413	Pygocentrus_nattereri
ENSHCOG00000020440	-	100	95.276	ENSPNAG00000024491	tnpo2	100	95.276	Pygocentrus_nattereri
ENSHCOG00000020440	-	100	93.138	ENSRNOG00000003970	Tnpo2	97	93.138	Rattus_norvegicus
ENSHCOG00000020440	-	100	92.913	ENSRBIG00000036652	TNPO2	100	92.913	Rhinopithecus_bieti
ENSHCOG00000020440	-	100	92.913	ENSRROG00000040402	TNPO2	100	92.913	Rhinopithecus_roxellana
ENSHCOG00000020440	-	100	92.913	ENSSBOG00000019551	TNPO2	100	92.913	Saimiri_boliviensis_boliviensis
ENSHCOG00000020440	-	96	94.166	ENSSHAG00000015858	TNPO2	99	94.166	Sarcophilus_harrisii
ENSHCOG00000020440	-	100	96.063	ENSSFOG00015018955	TNPO2	100	96.063	Scleropages_formosus
ENSHCOG00000020440	-	100	94.151	ENSSFOG00015010934	tnpo2	100	94.151	Scleropages_formosus
ENSHCOG00000020440	-	100	98.763	ENSSMAG00000004050	-	100	98.763	Scophthalmus_maximus
ENSHCOG00000020440	-	100	95.613	ENSSMAG00000012008	tnpo2	100	95.613	Scophthalmus_maximus
ENSHCOG00000020440	-	100	95.501	ENSSDUG00000001767	tnpo2	100	95.501	Seriola_dumerili
ENSHCOG00000020440	-	100	99.213	ENSSDUG00000002607	TNPO2	100	99.213	Seriola_dumerili
ENSHCOG00000020440	-	100	99.325	ENSSLDG00000013107	-	100	99.325	Seriola_lalandi_dorsalis
ENSHCOG00000020440	-	100	95.501	ENSSLDG00000025629	tnpo2	100	95.501	Seriola_lalandi_dorsalis
ENSHCOG00000020440	-	82	92.750	ENSSARG00000003825	TNPO2	86	92.750	Sorex_araneus
ENSHCOG00000020440	-	100	92.506	ENSSPUG00000000736	TNPO2	100	92.394	Sphenodon_punctatus
ENSHCOG00000020440	-	100	95.276	ENSSPAG00000008512	tnpo2	100	95.276	Stegastes_partitus
ENSHCOG00000020440	-	100	96.966	ENSSPAG00000008511	-	100	96.966	Stegastes_partitus
ENSHCOG00000020440	-	100	93.026	ENSSSCG00000013726	TNPO2	100	93.026	Sus_scrofa
ENSHCOG00000020440	-	100	98.650	ENSTRUG00000009453	TNPO2	100	98.650	Takifugu_rubripes
ENSHCOG00000020440	-	100	93.363	ENSTRUG00000012698	tnpo2	99	93.363	Takifugu_rubripes
ENSHCOG00000020440	-	100	95.726	ENSTNIG00000014071	TNPO2	100	95.726	Tetraodon_nigroviridis
ENSHCOG00000020440	-	100	85.377	ENSTNIG00000003295	TNPO2	98	93.534	Tetraodon_nigroviridis
ENSHCOG00000020440	-	100	91.991	ENSTTRG00000005443	TNPO2	100	91.991	Tursiops_truncatus
ENSHCOG00000020440	-	100	91.880	ENSUAMG00000019621	TNPO2	100	91.880	Ursus_americanus
ENSHCOG00000020440	-	100	89.310	ENSUMAG00000006504	TNPO2	99	89.310	Ursus_maritimus
ENSHCOG00000020440	-	100	85.714	ENSVVUG00000023860	TNPO2	100	85.489	Vulpes_vulpes
ENSHCOG00000020440	-	100	91.901	ENSXETG00000004771	tnpo2	99	91.451	Xenopus_tropicalis
ENSHCOG00000020440	-	100	95.838	ENSXCOG00000014460	TNPO2	99	95.838	Xiphophorus_couchianus
ENSHCOG00000020440	-	100	98.988	ENSXMAG00000012793	TNPO2	100	98.988	Xiphophorus_maculatus
ENSHCOG00000020440	-	100	93.933	ENSXMAG00000014217	TNPO2	100	93.933	Xiphophorus_maculatus