EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000020553 (Gene tree)
Gene ID: 109506849
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3988 bases
Position: chrKV880456.1:375888-379875
Accession: 109506849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000028135	TRM13	PF05206.14	4.1e-76	1	1
ENSHCOP00000028135	zf-U11-48K	PF05253.12	7.4e-09	1	1
ENSHCOP00000028135	zf-TRM13_CCCH	PF11722.8	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000024959	-	1257	XM_019855855	ENSHCOP00000028135	418 (aa)	XP_019711414	-

Gene Model

Click here to download ENSHCOG00000020553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000020553's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000020553	trmt13	99	47.357	ENSG00000122435	TRMT13	98	47.780	Homo_sapiens
ENSHCOG00000020553	trmt13	98	52.515	ENSAPOG00000015131	trmt13	99	52.515	Acanthochromis_polyacanthus
ENSHCOG00000020553	trmt13	98	48.498	ENSAMEG00000008917	TRMT13	96	48.712	Ailuropoda_melanoleuca
ENSHCOG00000020553	trmt13	99	54.762	ENSACIG00000005804	trmt13	95	52.876	Amphilophus_citrinellus
ENSHCOG00000020553	trmt13	98	52.515	ENSAOCG00000023585	trmt13	99	52.515	Amphiprion_ocellaris
ENSHCOG00000020553	trmt13	98	52.314	ENSAPEG00000004025	trmt13	99	52.314	Amphiprion_percula
ENSHCOG00000020553	trmt13	98	55.054	ENSATEG00000006597	trmt13	97	55.054	Anabas_testudineus
ENSHCOG00000020553	trmt13	88	48.931	ENSAPLG00000014924	TRMT13	98	48.449	Anas_platyrhynchos
ENSHCOG00000020553	trmt13	96	50.437	ENSACAG00000003498	TRMT13	97	50.437	Anolis_carolinensis
ENSHCOG00000020553	trmt13	98	48.069	ENSANAG00000019525	TRMT13	96	48.498	Aotus_nancymaae
ENSHCOG00000020553	trmt13	99	56.696	ENSACLG00000020018	trmt13	99	56.696	Astatotilapia_calliptera
ENSHCOG00000020553	trmt13	96	48.899	ENSAMXG00000017963	trmt13	97	49.559	Astyanax_mexicanus
ENSHCOG00000020553	trmt13	98	48.498	ENSBTAG00000015781	TRMT13	96	48.498	Bos_taurus
ENSHCOG00000020553	trmt13	96	30.861	WBGene00013026	Y49A3A.3	97	30.861	Caenorhabditis_elegans
ENSHCOG00000020553	trmt13	98	47.084	ENSCJAG00000000200	TRMT13	82	64.228	Callithrix_jacchus
ENSHCOG00000020553	trmt13	64	48.254	ENSCAFG00000020021	TRMT13	99	48.254	Canis_familiaris
ENSHCOG00000020553	trmt13	60	54.826	ENSCAFG00020011572	TRMT13	89	54.826	Canis_lupus_dingo
ENSHCOG00000020553	trmt13	97	48.380	ENSCHIG00000015395	TRMT13	96	48.380	Capra_hircus
ENSHCOG00000020553	trmt13	97	46.467	ENSTSYG00000010811	TRMT13	97	47.537	Carlito_syrichta
ENSHCOG00000020553	trmt13	75	37.681	ENSCAPG00000009085	TRMT13	97	38.841	Cavia_aperea
ENSHCOG00000020553	trmt13	98	47.516	ENSCPOG00000000694	TRMT13	96	47.516	Cavia_porcellus
ENSHCOG00000020553	trmt13	98	47.357	ENSCCAG00000023772	TRMT13	96	48.069	Cebus_capucinus
ENSHCOG00000020553	trmt13	98	47.639	ENSCATG00000033556	TRMT13	96	48.069	Cercocebus_atys
ENSHCOG00000020553	trmt13	88	47.368	ENSCLAG00000008220	TRMT13	99	47.381	Chinchilla_lanigera
ENSHCOG00000020553	trmt13	98	48.069	ENSCSAG00000001506	TRMT13	96	48.069	Chlorocebus_sabaeus
ENSHCOG00000020553	trmt13	97	49.130	ENSCPBG00000026671	TRMT13	95	49.130	Chrysemys_picta_bellii
ENSHCOG00000020553	trmt13	98	47.639	ENSCANG00000034659	TRMT13	96	48.069	Colobus_angolensis_palliatus
ENSHCOG00000020553	trmt13	98	46.352	ENSCGRG00001021601	Trmt13	96	46.352	Cricetulus_griseus_chok1gshd
ENSHCOG00000020553	trmt13	99	58.469	ENSCSEG00000000591	trmt13	98	58.469	Cynoglossus_semilaevis
ENSHCOG00000020553	trmt13	98	56.688	ENSCVAG00000017342	trmt13	94	57.325	Cyprinodon_variegatus
ENSHCOG00000020553	trmt13	96	51.121	ENSDARG00000102846	trmt13	95	51.121	Danio_rerio
ENSHCOG00000020553	trmt13	61	52.985	ENSDNOG00000001710	TRMT13	80	52.612	Dasypus_novemcinctus
ENSHCOG00000020553	trmt13	97	47.527	ENSDORG00000015808	Trmt13	95	47.527	Dipodomys_ordii
ENSHCOG00000020553	trmt13	96	34.101	FBgn0037435	CG18048	94	34.101	Drosophila_melanogaster
ENSHCOG00000020553	trmt13	97	42.050	ENSETEG00000005819	TRMT13	98	41.701	Echinops_telfairi
ENSHCOG00000020553	trmt13	96	45.824	ENSEBUG00000014444	trmt13	96	45.824	Eptatretus_burgeri
ENSHCOG00000020553	trmt13	98	47.639	ENSEASG00005015918	TRMT13	96	47.639	Equus_asinus_asinus
ENSHCOG00000020553	trmt13	98	47.639	ENSECAG00000022626	TRMT13	96	47.639	Equus_caballus
ENSHCOG00000020553	trmt13	66	52.137	ENSEEUG00000000294	TRMT13	59	51.724	Erinaceus_europaeus
ENSHCOG00000020553	trmt13	98	49.138	ENSELUG00000003803	trmt13	98	49.784	Esox_lucius
ENSHCOG00000020553	trmt13	98	48.069	ENSFCAG00000030618	TRMT13	98	46.667	Felis_catus
ENSHCOG00000020553	trmt13	97	50.441	ENSFALG00000002424	TRMT13	95	50.441	Ficedula_albicollis
ENSHCOG00000020553	trmt13	98	46.203	ENSFDAG00000006342	TRMT13	98	46.203	Fukomys_damarensis
ENSHCOG00000020553	trmt13	84	58.355	ENSFHEG00000022954	trmt13	94	57.908	Fundulus_heteroclitus
ENSHCOG00000020553	trmt13	96	51.325	ENSGMOG00000013223	trmt13	100	51.090	Gadus_morhua
ENSHCOG00000020553	trmt13	97	49.782	ENSGALG00000005290	TRMT13	95	50.110	Gallus_gallus
ENSHCOG00000020553	trmt13	81	59.331	ENSGAFG00000001577	trmt13	81	59.889	Gambusia_affinis
ENSHCOG00000020553	trmt13	97	57.930	ENSGACG00000013428	trmt13	97	58.590	Gasterosteus_aculeatus
ENSHCOG00000020553	trmt13	97	48.373	ENSGAGG00000023303	TRMT13	94	55.344	Gopherus_agassizii
ENSHCOG00000020553	trmt13	99	47.146	ENSGGOG00000005616	TRMT13	98	47.569	Gorilla_gorilla
ENSHCOG00000020553	trmt13	99	56.541	ENSHBUG00000007754	trmt13	99	56.541	Haplochromis_burtoni
ENSHCOG00000020553	trmt13	96	46.957	ENSHGLG00000002164	TRMT13	94	46.957	Heterocephalus_glaber_female
ENSHCOG00000020553	trmt13	96	46.957	ENSHGLG00100001618	TRMT13	94	46.957	Heterocephalus_glaber_male
ENSHCOG00000020553	trmt13	96	49.103	ENSIPUG00000024787	trmt13	97	50.000	Ictalurus_punctatus
ENSHCOG00000020553	trmt13	98	47.527	ENSSTOG00000013483	TRMT13	96	47.527	Ictidomys_tridecemlineatus
ENSHCOG00000020553	trmt13	98	47.425	ENSJJAG00000018012	Trmt13	97	47.425	Jaculus_jaculus
ENSHCOG00000020553	trmt13	68	55.873	ENSKMAG00000007639	trmt13	99	55.873	Kryptolebias_marmoratus
ENSHCOG00000020553	trmt13	99	54.449	ENSLBEG00000020238	trmt13	100	54.873	Labrus_bergylta
ENSHCOG00000020553	trmt13	97	49.892	ENSLACG00000013153	TRMT13	100	47.631	Latimeria_chalumnae
ENSHCOG00000020553	trmt13	96	50.554	ENSLOCG00000000418	trmt13	96	50.885	Lepisosteus_oculatus
ENSHCOG00000020553	trmt13	73	47.875	ENSLAFG00000002383	TRMT13	95	47.875	Loxodonta_africana
ENSHCOG00000020553	trmt13	98	48.069	ENSMFAG00000034681	TRMT13	96	48.069	Macaca_fascicularis
ENSHCOG00000020553	trmt13	98	48.069	ENSMMUG00000004243	TRMT13	96	48.069	Macaca_mulatta
ENSHCOG00000020553	trmt13	98	48.069	ENSMNEG00000036102	TRMT13	96	48.069	Macaca_nemestrina
ENSHCOG00000020553	trmt13	98	47.639	ENSMLEG00000034258	TRMT13	96	48.069	Mandrillus_leucophaeus
ENSHCOG00000020553	trmt13	96	56.140	ENSMAMG00000016597	trmt13	95	56.140	Mastacembelus_armatus
ENSHCOG00000020553	trmt13	99	56.473	ENSMZEG00005020959	trmt13	99	56.473	Maylandia_zebra
ENSHCOG00000020553	trmt13	88	50.120	ENSMGAG00000006970	TRMT13	98	50.120	Meleagris_gallopavo
ENSHCOG00000020553	trmt13	98	46.667	ENSMAUG00000010448	Trmt13	96	46.667	Mesocricetus_auratus
ENSHCOG00000020553	trmt13	98	48.283	ENSMICG00000005283	TRMT13	96	48.283	Microcebus_murinus
ENSHCOG00000020553	trmt13	99	47.346	ENSMOCG00000019914	Trmt13	97	47.346	Microtus_ochrogaster
ENSHCOG00000020553	trmt13	66	53.608	ENSMMOG00000007762	trmt13	98	53.608	Mola_mola
ENSHCOG00000020553	trmt13	97	47.346	ENSMODG00000003646	TRMT13	95	47.234	Monodelphis_domestica
ENSHCOG00000020553	trmt13	99	57.471	ENSMALG00000020965	trmt13	97	57.471	Monopterus_albus
ENSHCOG00000020553	trmt13	97	47.403	MGP_CAROLIEiJ_G0025568	Trmt13	96	46.552	Mus_caroli
ENSHCOG00000020553	trmt13	98	46.983	ENSMUSG00000033439	Trmt13	96	46.983	Mus_musculus
ENSHCOG00000020553	trmt13	99	46.398	MGP_PahariEiJ_G0027014	Trmt13	97	46.822	Mus_pahari
ENSHCOG00000020553	trmt13	96	47.817	MGP_SPRETEiJ_G0026518	Trmt13	95	47.817	Mus_spretus
ENSHCOG00000020553	trmt13	73	49.853	ENSMPUG00000002078	-	92	49.853	Mustela_putorius_furo
ENSHCOG00000020553	trmt13	98	48.712	ENSMLUG00000002124	TRMT13	96	48.712	Myotis_lucifugus
ENSHCOG00000020553	trmt13	99	52.144	ENSNBRG00000006783	trmt13	96	53.103	Neolamprologus_brichardi
ENSHCOG00000020553	trmt13	99	47.146	ENSNLEG00000035917	TRMT13	98	47.569	Nomascus_leucogenys
ENSHCOG00000020553	trmt13	56	44.898	ENSMEUG00000013346	-	93	45.532	Notamacropus_eugenii
ENSHCOG00000020553	trmt13	60	54.054	ENSOPRG00000012048	TRMT13	53	54.054	Ochotona_princeps
ENSHCOG00000020553	trmt13	99	57.871	ENSONIG00000004574	trmt13	99	57.871	Oreochromis_niloticus
ENSHCOG00000020553	trmt13	87	48.210	ENSOANG00000012057	TRMT13	96	48.210	Ornithorhynchus_anatinus
ENSHCOG00000020553	trmt13	98	47.414	ENSOCUG00000023095	TRMT13	96	47.414	Oryctolagus_cuniculus
ENSHCOG00000020553	trmt13	99	51.613	ENSORLG00000003320	trmt13	99	51.828	Oryzias_latipes
ENSHCOG00000020553	trmt13	98	55.432	ENSORLG00020005972	trmt13	97	55.432	Oryzias_latipes_hni
ENSHCOG00000020553	trmt13	99	56.494	ENSORLG00015002270	trmt13	99	56.710	Oryzias_latipes_hsok
ENSHCOG00000020553	trmt13	100	55.844	ENSOMEG00000006724	trmt13	95	56.061	Oryzias_melastigma
ENSHCOG00000020553	trmt13	98	47.312	ENSOGAG00000005618	TRMT13	95	47.246	Otolemur_garnettii
ENSHCOG00000020553	trmt13	97	48.380	ENSOARG00000017983	TRMT13	96	48.380	Ovis_aries
ENSHCOG00000020553	trmt13	99	47.357	ENSPPAG00000043736	TRMT13	98	47.780	Pan_paniscus
ENSHCOG00000020553	trmt13	98	48.283	ENSPPRG00000003424	TRMT13	98	46.667	Panthera_pardus
ENSHCOG00000020553	trmt13	98	48.283	ENSPTIG00000018598	TRMT13	98	46.667	Panthera_tigris_altaica
ENSHCOG00000020553	trmt13	99	47.357	ENSPTRG00000001001	TRMT13	98	47.780	Pan_troglodytes
ENSHCOG00000020553	trmt13	98	47.639	ENSPANG00000007598	TRMT13	96	48.069	Papio_anubis
ENSHCOG00000020553	trmt13	97	52.466	ENSPKIG00000001514	trmt13	97	52.466	Paramormyrops_kingsleyae
ENSHCOG00000020553	trmt13	87	47.268	ENSPSIG00000012703	TRMT13	99	47.268	Pelodiscus_sinensis
ENSHCOG00000020553	trmt13	98	58.314	ENSPMGG00000013298	trmt13	93	58.314	Periophthalmus_magnuspinnatus
ENSHCOG00000020553	trmt13	96	48.253	ENSPEMG00000000275	Trmt13	95	48.253	Peromyscus_maniculatus_bairdii
ENSHCOG00000020553	trmt13	96	47.939	ENSPMAG00000000823	trmt13	97	47.826	Petromyzon_marinus
ENSHCOG00000020553	trmt13	97	48.712	ENSPCIG00000007699	TRMT13	96	48.498	Phascolarctos_cinereus
ENSHCOG00000020553	trmt13	96	57.437	ENSPFOG00000008675	trmt13	94	58.508	Poecilia_formosa
ENSHCOG00000020553	trmt13	98	56.570	ENSPLAG00000009709	trmt13	99	56.570	Poecilia_latipinna
ENSHCOG00000020553	trmt13	98	55.142	ENSPMEG00000022954	trmt13	99	56.125	Poecilia_mexicana
ENSHCOG00000020553	trmt13	81	59.511	ENSPREG00000005645	trmt13	92	57.914	Poecilia_reticulata
ENSHCOG00000020553	trmt13	99	47.458	ENSPPYG00000001120	TRMT13	98	47.458	Pongo_abelii
ENSHCOG00000020553	trmt13	98	48.491	ENSPCAG00000002340	TRMT13	96	48.491	Procavia_capensis
ENSHCOG00000020553	trmt13	98	48.069	ENSPCOG00000017984	TRMT13	96	48.069	Propithecus_coquereli
ENSHCOG00000020553	trmt13	98	48.283	ENSPVAG00000017430	TRMT13	96	48.283	Pteropus_vampyrus
ENSHCOG00000020553	trmt13	99	55.982	ENSPNYG00000013690	trmt13	99	55.982	Pundamilia_nyererei
ENSHCOG00000020553	trmt13	96	49.007	ENSPNAG00000022130	trmt13	97	49.007	Pygocentrus_nattereri
ENSHCOG00000020553	trmt13	96	47.072	ENSRNOG00000015140	Trmt13	92	47.072	Rattus_norvegicus
ENSHCOG00000020553	trmt13	98	47.639	ENSRBIG00000037686	TRMT13	96	48.069	Rhinopithecus_bieti
ENSHCOG00000020553	trmt13	98	47.639	ENSRROG00000044057	TRMT13	96	48.069	Rhinopithecus_roxellana
ENSHCOG00000020553	trmt13	98	47.854	ENSSBOG00000026541	TRMT13	96	48.283	Saimiri_boliviensis_boliviensis
ENSHCOG00000020553	trmt13	88	47.529	ENSSHAG00000005213	TRMT13	93	47.529	Sarcophilus_harrisii
ENSHCOG00000020553	trmt13	96	50.336	ENSSFOG00015017560	trmt13	96	50.448	Scleropages_formosus
ENSHCOG00000020553	trmt13	99	56.809	ENSSMAG00000014592	trmt13	96	56.503	Scophthalmus_maximus
ENSHCOG00000020553	trmt13	98	55.085	ENSSDUG00000015508	trmt13	97	55.115	Seriola_dumerili
ENSHCOG00000020553	trmt13	99	55.368	ENSSLDG00000019060	trmt13	97	55.368	Seriola_lalandi_dorsalis
ENSHCOG00000020553	trmt13	98	41.387	ENSSARG00000010344	TRMT13	98	41.387	Sorex_araneus
ENSHCOG00000020553	trmt13	97	48.802	ENSSPUG00000016339	TRMT13	99	48.802	Sphenodon_punctatus
ENSHCOG00000020553	trmt13	96	57.018	ENSSPAG00000011922	trmt13	98	56.739	Stegastes_partitus
ENSHCOG00000020553	trmt13	98	48.069	ENSSSCG00000006869	TRMT13	96	48.069	Sus_scrofa
ENSHCOG00000020553	trmt13	97	49.670	ENSTGUG00000005253	TRMT13	98	49.670	Taeniopygia_guttata
ENSHCOG00000020553	trmt13	99	54.077	ENSTRUG00000008400	trmt13	99	54.077	Takifugu_rubripes
ENSHCOG00000020553	trmt13	66	45.752	ENSTBEG00000008911	TRMT13	76	45.752	Tupaia_belangeri
ENSHCOG00000020553	trmt13	98	47.702	ENSUAMG00000017251	TRMT13	96	47.702	Ursus_americanus
ENSHCOG00000020553	trmt13	98	48.498	ENSUMAG00000007901	TRMT13	98	48.122	Ursus_maritimus
ENSHCOG00000020553	trmt13	88	39.059	ENSVPAG00000001034	TRMT13	98	39.059	Vicugna_pacos
ENSHCOG00000020553	trmt13	98	48.712	ENSVVUG00000021996	TRMT13	96	48.712	Vulpes_vulpes
ENSHCOG00000020553	trmt13	96	50.448	ENSXETG00000013204	trmt13	96	50.000	Xenopus_tropicalis
ENSHCOG00000020553	trmt13	98	54.466	ENSXMAG00000010765	trmt13	99	55.556	Xiphophorus_maculatus