EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000020565 (Gene tree)
Gene ID: 109520490
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6152 bases
Position: chrKV880096.1:1009722-1015873
Accession: 109520490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000016780	S4	PF01479.25	1.7e-08	1	1
ENSHCOP00000028141	S4	PF01479.25	1.7e-08	1	1
ENSHCOP00000028141	Ribosomal_S4	PF00163.19	8.5e-10	1	1
ENSHCOP00000016780	Ribosomal_S4	PF00163.19	8.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000028622	-	561	-	ENSHCOP00000028141	186 (aa)	-	-
ENSHCOT00000024988	-	2050	XM_019877741	ENSHCOP00000016780	183 (aa)	XP_019733300	UPI00094ECC87

Gene Model

Click here to download ENSHCOG00000020565's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000020565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000020565	imp3	100	91.803	ENSAPOG00000014720	imp3	100	91.803	Acanthochromis_polyacanthus
ENSHCOG00000020565	imp3	100	68.478	ENSAMEG00000019247	IMP3	100	68.478	Ailuropoda_melanoleuca
ENSHCOG00000020565	imp3	99	90.217	ENSACIG00000022070	imp3	98	90.217	Amphilophus_citrinellus
ENSHCOG00000020565	imp3	100	92.350	ENSAOCG00000015761	imp3	100	92.350	Amphiprion_ocellaris
ENSHCOG00000020565	imp3	99	92.818	ENSAPEG00000005250	imp3	99	92.818	Amphiprion_percula
ENSHCOG00000020565	imp3	100	93.443	ENSATEG00000020021	imp3	100	93.443	Anabas_testudineus
ENSHCOG00000020565	imp3	99	68.108	ENSACAG00000016259	IMP3	99	68.108	Anolis_carolinensis
ENSHCOG00000020565	imp3	99	56.593	ENSANAG00000036874	-	99	56.593	Aotus_nancymaae
ENSHCOG00000020565	imp3	100	66.848	ENSANAG00000016669	-	100	66.848	Aotus_nancymaae
ENSHCOG00000020565	imp3	100	91.803	ENSACLG00000009929	imp3	100	91.803	Astatotilapia_calliptera
ENSHCOG00000020565	imp3	96	85.714	ENSAMXG00000018715	imp3	100	85.795	Astyanax_mexicanus
ENSHCOG00000020565	imp3	99	51.648	WBGene00016740	C48B6.2	99	51.648	Caenorhabditis_elegans
ENSHCOG00000020565	imp3	100	66.848	ENSCJAG00000044585	IMP3	100	66.848	Callithrix_jacchus
ENSHCOG00000020565	imp3	100	65.217	ENSCAFG00000018039	IMP3	82	65.217	Canis_familiaris
ENSHCOG00000020565	imp3	100	54.891	ENSCAFG00020006737	-	100	54.348	Canis_lupus_dingo
ENSHCOG00000020565	imp3	100	65.217	ENSCAFG00020003760	-	100	65.217	Canis_lupus_dingo
ENSHCOG00000020565	imp3	100	67.935	ENSCHIG00000006295	IMP3	100	67.935	Capra_hircus
ENSHCOG00000020565	imp3	100	67.391	ENSTSYG00000005503	IMP3	100	67.391	Carlito_syrichta
ENSHCOG00000020565	imp3	100	67.935	ENSCPOG00000012016	IMP3	100	67.935	Cavia_porcellus
ENSHCOG00000020565	imp3	100	66.848	ENSCCAG00000002712	-	100	66.848	Cebus_capucinus
ENSHCOG00000020565	imp3	98	58.889	ENSCCAG00000023378	-	99	58.046	Cebus_capucinus
ENSHCOG00000020565	imp3	100	67.391	ENSCATG00000015188	IMP3	100	67.391	Cercocebus_atys
ENSHCOG00000020565	imp3	100	67.391	ENSCSAG00000019732	IMP3	100	67.391	Chlorocebus_sabaeus
ENSHCOG00000020565	imp3	100	67.935	ENSCHOG00000012046	IMP3	100	67.935	Choloepus_hoffmanni
ENSHCOG00000020565	imp3	99	65.574	ENSCPBG00000021662	IMP3	99	65.574	Chrysemys_picta_bellii
ENSHCOG00000020565	imp3	98	66.111	ENSCING00000004233	-	99	66.111	Ciona_intestinalis
ENSHCOG00000020565	imp3	98	66.667	ENSCSAVG00000000698	-	99	66.667	Ciona_savignyi
ENSHCOG00000020565	imp3	100	67.391	ENSCANG00000018342	IMP3	100	67.391	Colobus_angolensis_palliatus
ENSHCOG00000020565	imp3	100	66.304	ENSCGRG00001001326	Imp3	100	66.304	Cricetulus_griseus_chok1gshd
ENSHCOG00000020565	imp3	100	66.304	ENSCGRG00000018907	Imp3	100	66.304	Cricetulus_griseus_crigri
ENSHCOG00000020565	imp3	99	90.659	ENSCSEG00000017200	imp3	99	90.659	Cynoglossus_semilaevis
ENSHCOG00000020565	imp3	100	82.105	ENSCVAG00000019511	imp3	100	82.105	Cyprinodon_variegatus
ENSHCOG00000020565	imp3	100	86.339	ENSDARG00000115266	imp3	100	86.982	Danio_rerio
ENSHCOG00000020565	imp3	100	66.848	ENSDNOG00000015787	IMP3	81	66.848	Dasypus_novemcinctus
ENSHCOG00000020565	imp3	100	66.848	ENSDORG00000029301	Imp3	100	66.848	Dipodomys_ordii
ENSHCOG00000020565	imp3	99	63.536	FBgn0034232	CG4866	100	63.536	Drosophila_melanogaster
ENSHCOG00000020565	imp3	100	69.022	ENSETEG00000004278	IMP3	100	69.022	Echinops_telfairi
ENSHCOG00000020565	imp3	99	74.033	ENSEBUG00000002343	imp3	99	74.033	Eptatretus_burgeri
ENSHCOG00000020565	imp3	100	66.848	ENSEASG00005015693	IMP3	100	66.848	Equus_asinus_asinus
ENSHCOG00000020565	imp3	100	67.391	ENSECAG00000015786	IMP3	100	67.391	Equus_caballus
ENSHCOG00000020565	imp3	99	89.503	ENSELUG00000023264	imp3	99	89.503	Esox_lucius
ENSHCOG00000020565	imp3	100	67.391	ENSFCAG00000040328	IMP3	100	67.391	Felis_catus
ENSHCOG00000020565	imp3	71	54.198	ENSFALG00000014811	IMP3	99	56.489	Ficedula_albicollis
ENSHCOG00000020565	imp3	100	67.935	ENSFDAG00000018422	IMP3	100	67.935	Fukomys_damarensis
ENSHCOG00000020565	imp3	100	89.617	ENSFHEG00000016954	imp3	100	89.617	Fundulus_heteroclitus
ENSHCOG00000020565	imp3	99	87.845	ENSGMOG00000018162	imp3	99	87.845	Gadus_morhua
ENSHCOG00000020565	imp3	100	55.135	ENSGALG00000040238	IMP3	100	56.757	Gallus_gallus
ENSHCOG00000020565	imp3	100	90.710	ENSGAFG00000007425	imp3	100	90.710	Gambusia_affinis
ENSHCOG00000020565	imp3	99	89.503	ENSGACG00000015998	imp3	99	89.503	Gasterosteus_aculeatus
ENSHCOG00000020565	imp3	99	63.934	ENSGAGG00000008163	IMP3	99	63.934	Gopherus_agassizii
ENSHCOG00000020565	imp3	100	67.391	ENSGGOG00000025122	IMP3	100	67.391	Gorilla_gorilla
ENSHCOG00000020565	imp3	100	92.350	ENSHBUG00000018453	imp3	100	92.350	Haplochromis_burtoni
ENSHCOG00000020565	imp3	100	67.391	ENSHGLG00000019824	IMP3	100	67.391	Heterocephalus_glaber_female
ENSHCOG00000020565	imp3	100	67.391	ENSHGLG00100020660	IMP3	100	67.391	Heterocephalus_glaber_male
ENSHCOG00000020565	imp3	99	84.530	ENSIPUG00000013142	imp3	99	84.530	Ictalurus_punctatus
ENSHCOG00000020565	imp3	100	67.935	ENSSTOG00000030143	IMP3	100	67.935	Ictidomys_tridecemlineatus
ENSHCOG00000020565	imp3	100	92.350	ENSKMAG00000001956	imp3	100	92.350	Kryptolebias_marmoratus
ENSHCOG00000020565	imp3	99	90.608	ENSLBEG00000008178	imp3	99	90.608	Labrus_bergylta
ENSHCOG00000020565	imp3	100	80.328	ENSLACG00000022148	imp3	100	80.328	Latimeria_chalumnae
ENSHCOG00000020565	imp3	99	85.083	ENSLOCG00000010237	imp3	99	85.083	Lepisosteus_oculatus
ENSHCOG00000020565	imp3	99	67.582	ENSLAFG00000004425	IMP3	99	67.582	Loxodonta_africana
ENSHCOG00000020565	imp3	100	67.391	ENSMFAG00000008867	IMP3	100	67.391	Macaca_fascicularis
ENSHCOG00000020565	imp3	100	67.391	ENSMMUG00000016103	IMP3	100	67.391	Macaca_mulatta
ENSHCOG00000020565	imp3	100	67.391	ENSMNEG00000026328	IMP3	100	67.391	Macaca_nemestrina
ENSHCOG00000020565	imp3	100	91.257	ENSMAMG00000003215	imp3	100	91.257	Mastacembelus_armatus
ENSHCOG00000020565	imp3	100	91.803	ENSMZEG00005005544	imp3	100	91.803	Maylandia_zebra
ENSHCOG00000020565	imp3	100	66.848	ENSMAUG00000010279	Imp3	100	66.848	Mesocricetus_auratus
ENSHCOG00000020565	imp3	100	67.391	ENSMICG00000044149	IMP3	100	67.391	Microcebus_murinus
ENSHCOG00000020565	imp3	100	67.391	ENSMOCG00000008647	Imp3	100	67.391	Microtus_ochrogaster
ENSHCOG00000020565	imp3	96	92.571	ENSMMOG00000018117	imp3	85	92.135	Mola_mola
ENSHCOG00000020565	imp3	100	67.935	ENSMODG00000025193	IMP3	100	67.935	Monodelphis_domestica
ENSHCOG00000020565	imp3	100	90.710	ENSMALG00000006505	imp3	100	90.710	Monopterus_albus
ENSHCOG00000020565	imp3	100	66.304	MGP_CAROLIEiJ_G0032258	Imp3	100	66.304	Mus_caroli
ENSHCOG00000020565	imp3	100	66.304	ENSMUSG00000032288	Imp3	100	66.304	Mus_musculus
ENSHCOG00000020565	imp3	100	66.304	MGP_PahariEiJ_G0015125	Imp3	100	66.304	Mus_pahari
ENSHCOG00000020565	imp3	100	66.304	MGP_SPRETEiJ_G0033398	Imp3	100	66.304	Mus_spretus
ENSHCOG00000020565	imp3	100	66.848	ENSMPUG00000020147	IMP3	100	66.848	Mustela_putorius_furo
ENSHCOG00000020565	imp3	100	67.391	ENSMLUG00000014032	IMP3	100	67.391	Myotis_lucifugus
ENSHCOG00000020565	imp3	100	65.217	ENSNGAG00000017248	Imp3	100	65.217	Nannospalax_galili
ENSHCOG00000020565	imp3	100	91.803	ENSNBRG00000004060	imp3	100	91.803	Neolamprologus_brichardi
ENSHCOG00000020565	imp3	100	68.478	ENSOPRG00000015906	-	100	68.478	Ochotona_princeps
ENSHCOG00000020565	imp3	100	67.935	ENSODEG00000020194	IMP3	100	67.935	Octodon_degus
ENSHCOG00000020565	imp3	100	91.803	ENSONIG00000010661	imp3	100	91.803	Oreochromis_niloticus
ENSHCOG00000020565	imp3	100	67.391	ENSOCUG00000004690	IMP3	100	67.391	Oryctolagus_cuniculus
ENSHCOG00000020565	imp3	100	90.710	ENSORLG00000004484	imp3	100	90.710	Oryzias_latipes
ENSHCOG00000020565	imp3	100	90.710	ENSORLG00020003771	imp3	100	90.710	Oryzias_latipes_hni
ENSHCOG00000020565	imp3	100	90.164	ENSORLG00015006933	imp3	100	90.164	Oryzias_latipes_hsok
ENSHCOG00000020565	imp3	100	91.803	ENSOMEG00000016160	imp3	100	91.803	Oryzias_melastigma
ENSHCOG00000020565	imp3	100	67.391	ENSOGAG00000004917	IMP3	100	67.391	Otolemur_garnettii
ENSHCOG00000020565	imp3	100	67.391	ENSPPAG00000009241	IMP3	100	67.391	Pan_paniscus
ENSHCOG00000020565	imp3	100	67.391	ENSPPRG00000018701	IMP3	100	67.391	Panthera_pardus
ENSHCOG00000020565	imp3	100	67.391	ENSPTRG00000052235	IMP3	100	67.391	Pan_troglodytes
ENSHCOG00000020565	imp3	100	67.391	ENSPANG00000013668	IMP3	100	67.391	Papio_anubis
ENSHCOG00000020565	imp3	99	88.398	ENSPKIG00000007169	imp3	99	88.398	Paramormyrops_kingsleyae
ENSHCOG00000020565	imp3	100	81.720	ENSPMGG00000009379	imp3	100	81.720	Periophthalmus_magnuspinnatus
ENSHCOG00000020565	imp3	100	66.304	ENSPEMG00000013003	Imp3	100	66.304	Peromyscus_maniculatus_bairdii
ENSHCOG00000020565	imp3	100	90.710	ENSPFOG00000016529	imp3	100	90.710	Poecilia_formosa
ENSHCOG00000020565	imp3	100	91.257	ENSPLAG00000013831	imp3	100	91.257	Poecilia_latipinna
ENSHCOG00000020565	imp3	100	90.164	ENSPMEG00000000797	imp3	100	90.164	Poecilia_mexicana
ENSHCOG00000020565	imp3	100	90.710	ENSPREG00000006885	imp3	100	90.710	Poecilia_reticulata
ENSHCOG00000020565	imp3	100	67.935	ENSPPYG00000006664	IMP3	100	67.935	Pongo_abelii
ENSHCOG00000020565	imp3	99	68.132	ENSPCAG00000006920	IMP3	99	68.132	Procavia_capensis
ENSHCOG00000020565	imp3	100	67.391	ENSPCOG00000012367	IMP3	100	67.391	Propithecus_coquereli
ENSHCOG00000020565	imp3	100	67.935	ENSPVAG00000010036	IMP3	100	67.935	Pteropus_vampyrus
ENSHCOG00000020565	imp3	100	91.803	ENSPNYG00000000324	imp3	100	91.803	Pundamilia_nyererei
ENSHCOG00000020565	imp3	99	88.398	ENSPNAG00000017113	imp3	99	88.398	Pygocentrus_nattereri
ENSHCOG00000020565	imp3	100	66.304	ENSRNOG00000017460	Imp3	100	66.304	Rattus_norvegicus
ENSHCOG00000020565	imp3	100	67.935	ENSRBIG00000024522	IMP3	100	67.935	Rhinopithecus_bieti
ENSHCOG00000020565	imp3	100	67.935	ENSRROG00000024157	IMP3	100	67.935	Rhinopithecus_roxellana
ENSHCOG00000020565	imp3	99	54.945	YHR148W	-	99	54.945	Saccharomyces_cerevisiae
ENSHCOG00000020565	imp3	100	66.848	ENSSBOG00000006542	-	100	66.848	Saimiri_boliviensis_boliviensis
ENSHCOG00000020565	imp3	99	58.242	ENSSBOG00000026404	-	99	58.242	Saimiri_boliviensis_boliviensis
ENSHCOG00000020565	imp3	99	64.835	ENSSHAG00000006200	IMP3	99	64.835	Sarcophilus_harrisii
ENSHCOG00000020565	imp3	99	86.740	ENSSFOG00015012483	imp3	99	86.740	Scleropages_formosus
ENSHCOG00000020565	imp3	100	91.803	ENSSMAG00000007865	imp3	100	91.803	Scophthalmus_maximus
ENSHCOG00000020565	imp3	100	92.350	ENSSDUG00000010594	imp3	100	92.350	Seriola_dumerili
ENSHCOG00000020565	imp3	100	92.350	ENSSLDG00000015587	imp3	100	92.350	Seriola_lalandi_dorsalis
ENSHCOG00000020565	imp3	100	67.935	ENSSARG00000009657	IMP3	100	67.935	Sorex_araneus
ENSHCOG00000020565	imp3	100	90.710	ENSSPAG00000002088	imp3	100	90.710	Stegastes_partitus
ENSHCOG00000020565	imp3	100	55.135	ENSTGUG00000013228	IMP3	100	56.757	Taeniopygia_guttata
ENSHCOG00000020565	imp3	99	92.265	ENSTRUG00000025783	imp3	99	92.265	Takifugu_rubripes
ENSHCOG00000020565	imp3	100	67.935	ENSUAMG00000022724	IMP3	100	67.935	Ursus_americanus
ENSHCOG00000020565	imp3	100	67.935	ENSUMAG00000003736	IMP3	100	67.935	Ursus_maritimus
ENSHCOG00000020565	imp3	100	65.761	ENSVVUG00000019589	IMP3	100	65.761	Vulpes_vulpes
ENSHCOG00000020565	imp3	96	92.000	ENSXCOG00000007392	imp3	96	92.045	Xiphophorus_couchianus
ENSHCOG00000020565	imp3	100	91.803	ENSXMAG00000023049	imp3	100	91.803	Xiphophorus_maculatus