EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000020628 (Gene tree)
Gene ID: 109506829
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3998 bases
Position: chrKV880456.1:362428-366425
Accession: 109506829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000028188	RTC	PF01137.21	1.1e-81	1	1
ENSHCOP00000028188	RTC_insert	PF05189.13	5.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000028652	-	1328	XM_019855824	ENSHCOP00000028188	405 (aa)	XP_019711383	UPI00094F114A

Gene Model

Click here to download ENSHCOG00000020628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000020628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000020628	rtca	89	64.754	ENSG00000137996	RTCA	100	67.347	Homo_sapiens
ENSHCOG00000020628	rtca	90	77.808	ENSAPOG00000001345	rtca	99	77.808	Acanthochromis_polyacanthus
ENSHCOG00000020628	rtca	65	63.941	ENSAMEG00000008855	RTCA	100	63.941	Ailuropoda_melanoleuca
ENSHCOG00000020628	rtca	89	77.473	ENSACIG00000019643	rtca	100	77.473	Amphilophus_citrinellus
ENSHCOG00000020628	rtca	90	78.082	ENSAOCG00000014979	rtca	99	78.082	Amphiprion_ocellaris
ENSHCOG00000020628	rtca	90	78.082	ENSAPEG00000006945	rtca	99	78.082	Amphiprion_percula
ENSHCOG00000020628	rtca	86	78.510	ENSATEG00000006315	rtca	96	78.510	Anabas_testudineus
ENSHCOG00000020628	rtca	86	61.473	ENSAPLG00000015430	RTCA	100	61.473	Anas_platyrhynchos
ENSHCOG00000020628	rtca	88	64.820	ENSANAG00000025446	RTCA	99	64.820	Aotus_nancymaae
ENSHCOG00000020628	rtca	90	78.356	ENSACLG00000020770	rtca	99	78.356	Astatotilapia_calliptera
ENSHCOG00000020628	rtca	89	68.956	ENSAMXG00000043271	rtca	100	68.956	Astyanax_mexicanus
ENSHCOG00000020628	rtca	89	64.481	ENSBTAG00000006321	RTCA	100	64.481	Bos_taurus
ENSHCOG00000020628	rtca	89	64.208	ENSCJAG00000003398	RTCA	100	64.208	Callithrix_jacchus
ENSHCOG00000020628	rtca	88	63.989	ENSCAFG00000020010	RTCA	67	63.989	Canis_familiaris
ENSHCOG00000020628	rtca	88	63.989	ENSCAFG00020011528	RTCA	56	63.989	Canis_lupus_dingo
ENSHCOG00000020628	rtca	89	64.208	ENSCHIG00000018937	RTCA	100	64.208	Capra_hircus
ENSHCOG00000020628	rtca	89	63.934	ENSTSYG00000011305	RTCA	100	63.934	Carlito_syrichta
ENSHCOG00000020628	rtca	89	63.934	ENSCCAG00000021844	RTCA	99	65.766	Cebus_capucinus
ENSHCOG00000020628	rtca	89	62.533	ENSCATG00000019364	RTCA	100	63.754	Cercocebus_atys
ENSHCOG00000020628	rtca	77	64.873	ENSCLAG00000006125	RTCA	100	64.873	Chinchilla_lanigera
ENSHCOG00000020628	rtca	89	64.481	ENSCSAG00000001509	RTCA	100	64.481	Chlorocebus_sabaeus
ENSHCOG00000020628	rtca	88	64.266	ENSCHOG00000005211	RTCA	99	64.266	Choloepus_hoffmanni
ENSHCOG00000020628	rtca	89	61.918	ENSCPBG00000026658	RTCA	100	61.918	Chrysemys_picta_bellii
ENSHCOG00000020628	rtca	88	54.318	ENSCING00000007875	-	98	54.318	Ciona_intestinalis
ENSHCOG00000020628	rtca	88	52.661	ENSCSAVG00000007269	-	98	52.661	Ciona_savignyi
ENSHCOG00000020628	rtca	89	64.754	ENSCANG00000040106	RTCA	100	64.754	Colobus_angolensis_palliatus
ENSHCOG00000020628	rtca	65	63.941	ENSCGRG00001013163	Rtca	85	63.941	Cricetulus_griseus_chok1gshd
ENSHCOG00000020628	rtca	89	72.778	ENSCSEG00000000530	rtca	97	72.778	Cynoglossus_semilaevis
ENSHCOG00000020628	rtca	89	60.548	ENSCVAG00000021809	rtca	100	60.548	Cyprinodon_variegatus
ENSHCOG00000020628	rtca	89	68.320	ENSDARG00000002215	rtca	100	68.320	Danio_rerio
ENSHCOG00000020628	rtca	89	63.934	ENSDNOG00000000456	RTCA	100	63.934	Dasypus_novemcinctus
ENSHCOG00000020628	rtca	88	65.374	ENSDORG00000005448	Rtca	100	64.754	Dipodomys_ordii
ENSHCOG00000020628	rtca	87	40.563	FBgn0025630	Rtca	98	40.563	Drosophila_melanogaster
ENSHCOG00000020628	rtca	82	48.810	ENSEBUG00000008556	rtca	92	48.810	Eptatretus_burgeri
ENSHCOG00000020628	rtca	89	63.934	ENSEASG00005015926	RTCA	100	63.934	Equus_asinus_asinus
ENSHCOG00000020628	rtca	89	63.934	ENSECAG00000019831	RTCA	100	63.934	Equus_caballus
ENSHCOG00000020628	rtca	81	58.358	ENSEEUG00000001165	RTCA	100	57.803	Erinaceus_europaeus
ENSHCOG00000020628	rtca	88	71.866	ENSELUG00000003741	rtca	99	71.866	Esox_lucius
ENSHCOG00000020628	rtca	88	64.266	ENSFCAG00000024460	RTCA	100	63.661	Felis_catus
ENSHCOG00000020628	rtca	87	61.190	ENSFALG00000002443	RTCA	95	61.190	Ficedula_albicollis
ENSHCOG00000020628	rtca	89	63.661	ENSFDAG00000012070	-	100	63.661	Fukomys_damarensis
ENSHCOG00000020628	rtca	88	52.210	ENSFDAG00000016084	-	100	52.210	Fukomys_damarensis
ENSHCOG00000020628	rtca	50	74.752	ENSFHEG00000002868	rtca	94	70.968	Fundulus_heteroclitus
ENSHCOG00000020628	rtca	89	68.407	ENSGMOG00000013264	rtca	100	68.407	Gadus_morhua
ENSHCOG00000020628	rtca	89	61.918	ENSGALG00000005277	RTCA	100	61.918	Gallus_gallus
ENSHCOG00000020628	rtca	90	76.438	ENSGAFG00000011853	rtca	99	76.438	Gambusia_affinis
ENSHCOG00000020628	rtca	89	74.451	ENSGACG00000013497	rtca	100	74.451	Gasterosteus_aculeatus
ENSHCOG00000020628	rtca	72	64.164	ENSGAGG00000023306	RTCA	100	64.164	Gopherus_agassizii
ENSHCOG00000020628	rtca	89	64.481	ENSGGOG00000009546	-	100	64.481	Gorilla_gorilla
ENSHCOG00000020628	rtca	89	63.661	ENSGGOG00000044018	-	100	63.661	Gorilla_gorilla
ENSHCOG00000020628	rtca	90	78.082	ENSHBUG00000002114	rtca	99	78.082	Haplochromis_burtoni
ENSHCOG00000020628	rtca	89	63.388	ENSHGLG00000002617	RTCA	100	63.388	Heterocephalus_glaber_female
ENSHCOG00000020628	rtca	89	63.388	ENSHGLG00100006056	RTCA	100	63.388	Heterocephalus_glaber_male
ENSHCOG00000020628	rtca	89	68.407	ENSIPUG00000024803	rtca	100	68.407	Ictalurus_punctatus
ENSHCOG00000020628	rtca	89	55.738	ENSSTOG00000033099	-	100	54.918	Ictidomys_tridecemlineatus
ENSHCOG00000020628	rtca	88	59.557	ENSSTOG00000013528	-	100	59.016	Ictidomys_tridecemlineatus
ENSHCOG00000020628	rtca	89	46.849	ENSJJAG00000016178	Rtca	100	46.849	Jaculus_jaculus
ENSHCOG00000020628	rtca	90	75.616	ENSKMAG00000006651	rtca	99	75.616	Kryptolebias_marmoratus
ENSHCOG00000020628	rtca	78	75.862	ENSLBEG00000002448	-	99	75.862	Labrus_bergylta
ENSHCOG00000020628	rtca	89	76.374	ENSLBEG00000028971	rtca	100	76.374	Labrus_bergylta
ENSHCOG00000020628	rtca	89	63.836	ENSLACG00000013666	RTCA	100	63.836	Latimeria_chalumnae
ENSHCOG00000020628	rtca	90	68.665	ENSLOCG00000000093	rtca	100	68.665	Lepisosteus_oculatus
ENSHCOG00000020628	rtca	89	63.934	ENSLAFG00000001473	RTCA	100	63.934	Loxodonta_africana
ENSHCOG00000020628	rtca	89	64.481	ENSMFAG00000034132	RTCA	100	64.481	Macaca_fascicularis
ENSHCOG00000020628	rtca	89	64.208	ENSMMUG00000019105	RTCA	100	64.208	Macaca_mulatta
ENSHCOG00000020628	rtca	75	63.430	ENSMNEG00000037163	RTCA	100	63.430	Macaca_nemestrina
ENSHCOG00000020628	rtca	89	53.005	ENSMLEG00000042151	RTCA	100	53.005	Mandrillus_leucophaeus
ENSHCOG00000020628	rtca	89	76.923	ENSMAMG00000016536	rtca	100	76.923	Mastacembelus_armatus
ENSHCOG00000020628	rtca	90	78.356	ENSMZEG00005017945	rtca	99	78.356	Maylandia_zebra
ENSHCOG00000020628	rtca	78	61.635	ENSMGAG00000006892	RTCA	99	61.635	Meleagris_gallopavo
ENSHCOG00000020628	rtca	89	65.027	ENSMAUG00000008488	Rtca	100	65.027	Mesocricetus_auratus
ENSHCOG00000020628	rtca	75	63.430	ENSMICG00000008643	RTCA	100	63.430	Microcebus_murinus
ENSHCOG00000020628	rtca	89	64.481	ENSMOCG00000016660	Rtca	100	64.481	Microtus_ochrogaster
ENSHCOG00000020628	rtca	75	74.593	ENSMMOG00000007750	rtca	100	74.593	Mola_mola
ENSHCOG00000020628	rtca	88	64.820	ENSMODG00000003557	RTCA	100	64.208	Monodelphis_domestica
ENSHCOG00000020628	rtca	89	77.198	ENSMALG00000020844	rtca	100	77.198	Monopterus_albus
ENSHCOG00000020628	rtca	89	64.208	MGP_CAROLIEiJ_G0025565	Rtca	100	64.208	Mus_caroli
ENSHCOG00000020628	rtca	89	63.934	ENSMUSG00000000339	Rtca	100	63.934	Mus_musculus
ENSHCOG00000020628	rtca	89	64.208	MGP_PahariEiJ_G0027011	Rtca	100	64.208	Mus_pahari
ENSHCOG00000020628	rtca	89	63.934	MGP_SPRETEiJ_G0026515	Rtca	100	63.934	Mus_spretus
ENSHCOG00000020628	rtca	89	63.661	ENSMPUG00000012119	RTCA	100	63.661	Mustela_putorius_furo
ENSHCOG00000020628	rtca	89	63.215	ENSMLUG00000009922	RTCA	100	63.215	Myotis_lucifugus
ENSHCOG00000020628	rtca	89	64.754	ENSNGAG00000011540	Rtca	99	64.754	Nannospalax_galili
ENSHCOG00000020628	rtca	90	78.356	ENSNBRG00000003062	rtca	99	78.356	Neolamprologus_brichardi
ENSHCOG00000020628	rtca	89	64.754	ENSNLEG00000031426	RTCA	100	64.754	Nomascus_leucogenys
ENSHCOG00000020628	rtca	65	61.710	ENSOPRG00000012092	RTCA	71	61.710	Ochotona_princeps
ENSHCOG00000020628	rtca	85	64.368	ENSODEG00000006990	RTCA	96	64.672	Octodon_degus
ENSHCOG00000020628	rtca	90	78.630	ENSONIG00000007753	rtca	99	78.630	Oreochromis_niloticus
ENSHCOG00000020628	rtca	77	64.353	ENSOANG00000012055	RTCA	98	64.353	Ornithorhynchus_anatinus
ENSHCOG00000020628	rtca	89	64.208	ENSOCUG00000014247	RTCA	100	64.208	Oryctolagus_cuniculus
ENSHCOG00000020628	rtca	89	77.198	ENSORLG00000013605	rtca	100	77.198	Oryzias_latipes
ENSHCOG00000020628	rtca	89	77.473	ENSORLG00020001904	rtca	100	77.473	Oryzias_latipes_hni
ENSHCOG00000020628	rtca	89	77.747	ENSORLG00015021064	rtca	100	77.747	Oryzias_latipes_hsok
ENSHCOG00000020628	rtca	89	76.923	ENSOMEG00000000756	rtca	100	76.923	Oryzias_melastigma
ENSHCOG00000020628	rtca	89	57.923	ENSOGAG00000005627	RTCA	100	57.923	Otolemur_garnettii
ENSHCOG00000020628	rtca	78	64.151	ENSOARG00000018122	RTCA	100	64.151	Ovis_aries
ENSHCOG00000020628	rtca	89	62.533	ENSPPAG00000035119	RTCA	100	63.754	Pan_paniscus
ENSHCOG00000020628	rtca	88	64.543	ENSPPRG00000000350	RTCA	100	63.934	Panthera_pardus
ENSHCOG00000020628	rtca	88	64.266	ENSPTIG00000012816	RTCA	100	63.661	Panthera_tigris_altaica
ENSHCOG00000020628	rtca	89	62.005	ENSPTRG00000001004	RTCA	100	63.107	Pan_troglodytes
ENSHCOG00000020628	rtca	89	64.481	ENSPANG00000000346	RTCA	100	64.481	Papio_anubis
ENSHCOG00000020628	rtca	89	69.231	ENSPKIG00000001653	rtca	100	69.231	Paramormyrops_kingsleyae
ENSHCOG00000020628	rtca	89	61.644	ENSPSIG00000011408	RTCA	100	61.644	Pelodiscus_sinensis
ENSHCOG00000020628	rtca	89	64.754	ENSPEMG00000018582	Rtca	100	64.754	Peromyscus_maniculatus_bairdii
ENSHCOG00000020628	rtca	89	52.877	ENSPMAG00000009110	rtca	99	52.877	Petromyzon_marinus
ENSHCOG00000020628	rtca	88	64.543	ENSPCIG00000007684	RTCA	99	64.543	Phascolarctos_cinereus
ENSHCOG00000020628	rtca	89	76.164	ENSPFOG00000004824	rtca	100	76.164	Poecilia_formosa
ENSHCOG00000020628	rtca	90	76.164	ENSPLAG00000011753	rtca	99	76.164	Poecilia_latipinna
ENSHCOG00000020628	rtca	90	76.164	ENSPMEG00000020469	rtca	99	76.164	Poecilia_mexicana
ENSHCOG00000020628	rtca	90	76.438	ENSPREG00000001365	rtca	99	76.438	Poecilia_reticulata
ENSHCOG00000020628	rtca	89	64.754	ENSPPYG00000001115	RTCA	100	64.754	Pongo_abelii
ENSHCOG00000020628	rtca	89	62.022	ENSPCAG00000005076	RTCA	100	62.022	Procavia_capensis
ENSHCOG00000020628	rtca	88	64.543	ENSPCOG00000005603	RTCA	100	63.934	Propithecus_coquereli
ENSHCOG00000020628	rtca	88	60.428	ENSPVAG00000009478	RTCA	100	59.894	Pteropus_vampyrus
ENSHCOG00000020628	rtca	90	78.356	ENSPNYG00000004722	rtca	99	78.356	Pundamilia_nyererei
ENSHCOG00000020628	rtca	89	69.231	ENSPNAG00000022270	rtca	100	69.231	Pygocentrus_nattereri
ENSHCOG00000020628	rtca	89	63.661	ENSRNOG00000014575	Rtca	100	63.661	Rattus_norvegicus
ENSHCOG00000020628	rtca	89	62.533	ENSRBIG00000041180	RTCA	100	63.754	Rhinopithecus_bieti
ENSHCOG00000020628	rtca	89	64.754	ENSRROG00000024929	RTCA	100	64.754	Rhinopithecus_roxellana
ENSHCOG00000020628	rtca	89	63.934	ENSSBOG00000028626	RTCA	100	63.934	Saimiri_boliviensis_boliviensis
ENSHCOG00000020628	rtca	88	64.820	ENSSHAG00000001758	RTCA	100	64.208	Sarcophilus_harrisii
ENSHCOG00000020628	rtca	88	76.667	ENSSMAG00000014680	rtca	97	76.667	Scophthalmus_maximus
ENSHCOG00000020628	rtca	88	76.816	ENSSDUG00000015585	rtca	97	76.667	Seriola_dumerili
ENSHCOG00000020628	rtca	86	77.077	ENSSLDG00000018985	rtca	95	77.077	Seriola_lalandi_dorsalis
ENSHCOG00000020628	rtca	77	61.199	ENSSARG00000013993	RTCA	100	61.199	Sorex_araneus
ENSHCOG00000020628	rtca	90	78.082	ENSSPAG00000011938	rtca	99	78.082	Stegastes_partitus
ENSHCOG00000020628	rtca	89	64.754	ENSSSCG00000006865	RTCA	100	64.754	Sus_scrofa
ENSHCOG00000020628	rtca	89	63.014	ENSTGUG00000005154	RTCA	100	63.014	Taeniopygia_guttata
ENSHCOG00000020628	rtca	89	76.099	ENSTRUG00000008799	rtca	100	76.099	Takifugu_rubripes
ENSHCOG00000020628	rtca	89	75.275	ENSTNIG00000004725	rtca	100	75.275	Tetraodon_nigroviridis
ENSHCOG00000020628	rtca	51	53.333	ENSTBEG00000000943	RTCA	59	53.333	Tupaia_belangeri
ENSHCOG00000020628	rtca	89	62.533	ENSTTRG00000015327	RTCA	100	62.533	Tursiops_truncatus
ENSHCOG00000020628	rtca	84	64.431	ENSUAMG00000017265	RTCA	96	64.431	Ursus_americanus
ENSHCOG00000020628	rtca	88	64.266	ENSUMAG00000007881	RTCA	100	63.661	Ursus_maritimus
ENSHCOG00000020628	rtca	77	56.151	ENSVPAG00000001039	RTCA	84	56.151	Vicugna_pacos
ENSHCOG00000020628	rtca	88	63.989	ENSVVUG00000022041	RTCA	67	63.989	Vulpes_vulpes
ENSHCOG00000020628	rtca	89	55.342	ENSXETG00000031661	RTCA	99	55.342	Xenopus_tropicalis
ENSHCOG00000020628	rtca	89	65.934	ENSXCOG00000008002	rtca	100	65.934	Xiphophorus_couchianus
ENSHCOG00000020628	rtca	90	76.164	ENSXMAG00000005482	rtca	99	76.164	Xiphophorus_maculatus