EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000020644 (Gene tree)
Gene ID: 109519217
Gene Symbol: -
Alias: -
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 3431 bases
Position: chrKV880066.1:904656-908086
Accession: 109519217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000028194	BUD22	PF09073.10	3.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000025081	-	2556	XM_019875624	ENSHCOP00000028194	590 (aa)	XP_019731183	UPI00094F32D5

Gene Model

Click here to download ENSHCOG00000020644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000020644's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000020644	-	52	59.813	ENSAMEG00000018050	SRFBP1	67	57.143	Ailuropoda_melanoleuca
ENSHCOG00000020644	-	73	81.132	ENSACIG00000019127	-	70	74.436	Amphilophus_citrinellus
ENSHCOG00000020644	-	84	35.108	ENSANAG00000022485	SRFBP1	73	57.143	Aotus_nancymaae
ENSHCOG00000020644	-	84	36.381	ENSCJAG00000017177	SRFBP1	73	57.857	Callithrix_jacchus
ENSHCOG00000020644	-	55	62.500	ENSCPOG00000004695	SRFBP1	71	62.500	Cavia_porcellus
ENSHCOG00000020644	-	84	36.220	ENSCCAG00000032237	-	73	58.993	Cebus_capucinus
ENSHCOG00000020644	-	63	49.724	ENSCLAG00000003630	SRFBP1	70	60.000	Chinchilla_lanigera
ENSHCOG00000020644	-	58	57.447	ENSCANG00000041298	SRFBP1	73	57.447	Colobus_angolensis_palliatus
ENSHCOG00000020644	-	57	79.339	ENSCSEG00000011789	-	83	77.273	Cynoglossus_semilaevis
ENSHCOG00000020644	-	55	57.463	ENSDARG00000075323	srfbp1	71	57.463	Danio_rerio
ENSHCOG00000020644	-	55	43.750	ENSEBUG00000007806	SRFBP1	57	43.750	Eptatretus_burgeri
ENSHCOG00000020644	-	60	57.241	ENSEASG00005012421	SRFBP1	75	57.241	Equus_asinus_asinus
ENSHCOG00000020644	-	84	37.931	ENSECAG00000015330	SRFBP1	75	57.241	Equus_caballus
ENSHCOG00000020644	-	84	48.362	ENSFHEG00000000477	-	87	47.932	Fundulus_heteroclitus
ENSHCOG00000020644	-	59	57.778	ENSGALG00000005316	SRFBP1	72	57.778	Gallus_gallus
ENSHCOG00000020644	-	85	48.269	ENSGAFG00000018777	-	90	46.255	Gambusia_affinis
ENSHCOG00000020644	-	71	97.297	ENSGACG00000009055	-	84	46.575	Gasterosteus_aculeatus
ENSHCOG00000020644	-	84	36.170	ENSGGOG00000007725	SRFBP1	70	61.600	Gorilla_gorilla
ENSHCOG00000020644	-	84	37.354	ENSSTOG00000029184	SRFBP1	69	61.240	Ictidomys_tridecemlineatus
ENSHCOG00000020644	-	58	74.016	ENSLBEG00000013924	-	74	74.016	Labrus_bergylta
ENSHCOG00000020644	-	55	78.788	ENSLACG00000004456	SRFBP1	62	53.846	Latimeria_chalumnae
ENSHCOG00000020644	-	84	39.453	ENSLOCG00000008772	SRFBP1	69	59.836	Lepisosteus_oculatus
ENSHCOG00000020644	-	84	46.947	ENSMAMG00000004632	-	89	45.265	Mastacembelus_armatus
ENSHCOG00000020644	-	58	56.250	ENSMOCG00000006206	Srfbp1	68	61.417	Microtus_ochrogaster
ENSHCOG00000020644	-	85	50.094	ENSMALG00000001812	-	90	49.907	Monopterus_albus
ENSHCOG00000020644	-	55	62.400	ENSMUSG00000024528	Srfbp1	68	62.400	Mus_musculus
ENSHCOG00000020644	-	83	37.059	ENSMLUG00000009984	SRFBP1	73	55.396	Myotis_lucifugus
ENSHCOG00000020644	-	84	46.918	ENSNBRG00000001146	-	99	47.590	Neolamprologus_brichardi
ENSHCOG00000020644	-	84	35.953	ENSOCUG00000009556	SRFBP1	73	57.931	Oryctolagus_cuniculus
ENSHCOG00000020644	-	67	72.932	ENSORLG00015000238	-	81	72.932	Oryzias_latipes_hsok
ENSHCOG00000020644	-	54	63.636	ENSPPRG00000001695	SRFBP1	69	63.636	Panthera_pardus
ENSHCOG00000020644	-	58	57.447	ENSPANG00000003799	SRFBP1	74	57.447	Papio_anubis
ENSHCOG00000020644	-	58	60.938	ENSPSIG00000010650	SRFBP1	71	60.938	Pelodiscus_sinensis
ENSHCOG00000020644	-	84	45.509	ENSPMGG00000001675	-	72	69.565	Periophthalmus_magnuspinnatus
ENSHCOG00000020644	-	84	36.874	ENSPCIG00000028532	SRFBP1	66	61.600	Phascolarctos_cinereus
ENSHCOG00000020644	-	88	45.336	ENSPFOG00000005272	-	74	56.989	Poecilia_formosa
ENSHCOG00000020644	-	84	36.190	ENSPPYG00000015714	SRFBP1	73	56.738	Pongo_abelii
ENSHCOG00000020644	-	84	37.817	ENSPCOG00000027331	SRFBP1	69	63.710	Propithecus_coquereli
ENSHCOG00000020644	-	86	48.704	ENSSMAG00000020630	-	100	47.249	Scophthalmus_maximus
ENSHCOG00000020644	-	88	50.998	ENSSDUG00000001828	-	87	51.017	Seriola_dumerili
ENSHCOG00000020644	-	82	36.419	ENSSPUG00000009204	SRFBP1	66	62.069	Sphenodon_punctatus
ENSHCOG00000020644	-	89	49.206	ENSSPAG00000010728	-	100	48.131	Stegastes_partitus
ENSHCOG00000020644	-	82	36.346	ENSUAMG00000016707	SRFBP1	69	62.500	Ursus_americanus
ENSHCOG00000020644	-	53	62.609	ENSUMAG00000018340	SRFBP1	78	56.115	Ursus_maritimus
ENSHCOG00000020644	-	57	57.241	ENSVPAG00000005714	SRFBP1	75	57.241	Vicugna_pacos
ENSHCOG00000020644	-	82	39.521	ENSXETG00000004681	srfbp1	68	54.918	Xenopus_tropicalis
ENSHCOG00000020644	-	83	48.828	ENSXCOG00000003410	-	99	48.555	Xiphophorus_couchianus