EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000020670 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 890 bases
Position: chrKV879881.1:957690-958579
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000016868	zf-C2H2	PF00096.26	2.5e-10	1	2
ENSHCOP00000016868	zf-C2H2	PF00096.26	2.5e-10	2	2
ENSHCOP00000016868	zf-met	PF12874.7	7.7e-07	1	2
ENSHCOP00000016868	zf-met	PF12874.7	7.7e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000028667	-	375	-	ENSHCOP00000016868	124 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000020670's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000020670's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000020670	-	72	53.933	ENSHCOG00000019481	-	70	53.933
ENSHCOG00000020670	-	72	53.933	ENSHCOG00000015005	-	51	53.933
ENSHCOG00000020670	-	72	47.191	ENSHCOG00000013713	gfi1b	53	47.191
ENSHCOG00000020670	-	87	55.056	ENSHCOG00000020972	-	94	55.056
ENSHCOG00000020670	-	73	45.977	ENSHCOG00000014874	-	59	45.977
ENSHCOG00000020670	-	84	49.438	ENSHCOG00000003909	-	56	49.438
ENSHCOG00000020670	-	75	44.643	ENSHCOG00000006286	ZNF319	63	44.643
ENSHCOG00000020670	-	74	56.180	ENSHCOG00000019465	-	69	56.180
ENSHCOG00000020670	-	86	53.333	ENSHCOG00000020984	-	78	53.333
ENSHCOG00000020670	-	90	49.451	ENSHCOG00000015000	-	79	49.153
ENSHCOG00000020670	-	81	51.685	ENSHCOG00000015105	-	87	52.778
ENSHCOG00000020670	-	86	51.685	ENSHCOG00000020725	-	65	51.685
ENSHCOG00000020670	-	73	55.056	ENSHCOG00000021073	-	77	55.056
ENSHCOG00000020670	-	72	48.315	ENSHCOG00000008742	-	75	48.315
ENSHCOG00000020670	-	72	53.933	ENSHCOG00000001338	-	89	51.765
ENSHCOG00000020670	-	74	52.874	ENSHCOG00000001272	-	96	52.809
ENSHCOG00000020670	-	84	52.809	ENSHCOG00000015441	-	68	52.809
ENSHCOG00000020670	-	73	47.945	ENSHCOG00000018977	-	60	47.945
ENSHCOG00000020670	-	74	46.591	ENSHCOG00000015231	-	51	46.591
ENSHCOG00000020670	-	72	56.180	ENSHCOG00000001793	-	70	56.180
ENSHCOG00000020670	-	72	53.409	ENSHCOG00000003021	-	52	53.409
ENSHCOG00000020670	-	74	52.222	ENSHCOG00000013455	-	86	51.111
ENSHCOG00000020670	-	96	53.488	ENSHCOG00000001448	-	63	53.488
ENSHCOG00000020670	-	89	50.562	ENSHCOG00000007990	-	72	50.562
ENSHCOG00000020670	-	85	51.685	ENSHCOG00000014713	-	95	52.809
ENSHCOG00000020670	-	86	51.807	ENSHCOG00000020993	-	60	51.807
ENSHCOG00000020670	-	73	55.056	ENSHCOG00000011411	-	80	55.056
ENSHCOG00000020670	-	73	52.809	ENSHCOG00000019385	-	69	52.809
ENSHCOG00000020670	-	73	53.333	ENSHCOG00000001883	-	82	53.333
ENSHCOG00000020670	-	85	52.941	ENSHCOG00000008028	-	81	52.941
ENSHCOG00000020670	-	72	50.649	ENSHCOG00000008205	-	69	48.529
ENSHCOG00000020670	-	73	49.438	ENSHCOG00000008906	-	78	49.438
ENSHCOG00000020670	-	73	51.111	ENSHCOG00000001873	-	55	51.111
ENSHCOG00000020670	-	86	51.685	ENSHCOG00000003085	-	67	51.685
ENSHCOG00000020670	-	75	46.067	ENSHCOG00000000511	-	59	46.067
ENSHCOG00000020670	-	73	53.571	ENSHCOG00000000517	-	72	53.571
ENSHCOG00000020670	-	87	51.765	ENSHCOG00000008168	-	97	51.136
ENSHCOG00000020670	-	72	52.809	ENSHCOG00000000947	-	67	52.809
ENSHCOG00000020670	-	72	49.231	ENSHCOG00000017437	-	54	50.562
ENSHCOG00000020670	-	74	52.381	ENSHCOG00000013489	-	88	49.438
ENSHCOG00000020670	-	83	44.944	ENSHCOG00000015237	-	58	44.944
ENSHCOG00000020670	-	73	52.809	ENSHCOG00000015476	-	89	52.809
ENSHCOG00000020670	-	72	55.056	ENSHCOG00000019541	-	60	55.056
ENSHCOG00000020670	-	73	53.333	ENSHCOG00000009009	-	60	53.333
ENSHCOG00000020670	-	73	55.128	ENSHCOG00000021028	-	87	55.128
ENSHCOG00000020670	-	86	50.562	ENSHCOG00000015386	-	76	50.562
ENSHCOG00000020670	-	79	55.556	ENSHCOG00000020856	-	79	55.556
ENSHCOG00000020670	-	74	50.562	ENSHCOG00000012617	-	80	50.562
ENSHCOG00000020670	-	74	50.000	ENSHCOG00000001629	-	62	50.000
ENSHCOG00000020670	-	73	41.176	ENSHCOG00000000800	-	69	41.176
ENSHCOG00000020670	-	79	52.809	ENSHCOG00000001238	-	94	52.809
ENSHCOG00000020670	-	73	52.809	ENSHCOG00000019497	-	78	52.809
ENSHCOG00000020670	-	88	51.220	ENSHCOG00000017456	-	86	51.220
ENSHCOG00000020670	-	72	56.180	ENSHCOG00000020940	-	63	56.180
ENSHCOG00000020670	-	73	52.809	ENSHCOG00000020909	-	77	52.809
ENSHCOG00000020670	-	72	50.562	ENSHCOG00000001345	-	79	50.562
ENSHCOG00000020670	-	90	48.315	ENSHCOG00000008234	-	64	47.436
ENSHCOG00000020670	-	74	54.054	ENSHCOG00000015246	-	60	54.054
ENSHCOG00000020670	-	73	46.512	ENSHCOG00000015241	-	63	46.512
ENSHCOG00000020670	-	94	54.286	ENSHCOG00000007485	-	92	52.941
ENSHCOG00000020670	-	72	50.562	ENSHCOG00000014781	-	54	50.562
ENSHCOG00000020670	-	73	52.941	ENSHCOG00000000138	-	62	52.941
ENSHCOG00000020670	-	99	43.820	ENSHCOG00000001318	-	94	48.315
ENSHCOG00000020670	-	73	51.220	ENSHCOG00000019458	-	51	51.220
ENSHCOG00000020670	-	72	54.023	ENSHCOG00000019454	-	54	54.023
ENSHCOG00000020670	-	73	43.590	ENSHCOG00000010332	-	57	43.590
ENSHCOG00000020670	-	72	51.765	ENSHCOG00000015463	-	59	51.765
ENSHCOG00000020670	-	73	46.067	ENSHCOG00000018201	-	81	46.067
ENSHCOG00000020670	-	73	46.067	ENSHCOG00000019555	GFI1	53	46.067
ENSHCOG00000020670	-	73	55.056	ENSHCOG00000021033	-	75	55.056
ENSHCOG00000020670	-	74	56.627	ENSHCOG00000020924	-	58	56.627
ENSHCOG00000020670	-	83	49.438	ENSHCOG00000020846	-	61	49.438
ENSHCOG00000020670	-	86	50.562	ENSHCOG00000020848	-	62	50.562
ENSHCOG00000020670	-	74	50.000	ENSHCOG00000003041	-	89	46.753
ENSHCOG00000020670	-	73	50.000	ENSHCOG00000014986	-	78	50.000
ENSHCOG00000020670	-	73	51.667	ENSHCOG00000001292	-	58	51.667
ENSHCOG00000020670	-	73	57.303	ENSHCOG00000001638	-	73	57.303
ENSHCOG00000020670	-	73	50.562	ENSHCOG00000001631	-	55	50.562
ENSHCOG00000020670	-	72	55.056	ENSHCOG00000001242	-	60	55.056
ENSHCOG00000020670	-	74	55.056	ENSHCOG00000011432	-	92	55.056
ENSHCOG00000020670	-	73	53.933	ENSHCOG00000011433	-	74	53.933
ENSHCOG00000020670	-	90	52.809	ENSHCOG00000012175	-	85	52.809
ENSHCOG00000020670	-	72	48.315	ENSHCOG00000014796	-	58	48.315
ENSHCOG00000020670	-	73	50.562	ENSHCOG00000014797	-	56	50.562
ENSHCOG00000020670	-	77	54.688	ENSHCOG00000000627	-	55	54.688
ENSHCOG00000020670	-	72	61.111	ENSHCOG00000019438	-	85	61.111
ENSHCOG00000020670	-	73	47.191	ENSHCOG00000015639	znf319b	67	47.191
ENSHCOG00000020670	-	73	51.163	ENSHCOG00000012592	-	55	51.163
ENSHCOG00000020670	-	94	48.193	ENSHCOG00000008181	-	61	48.193
ENSHCOG00000020670	-	84	56.923	ENSHCOG00000007664	-	96	56.923
ENSHCOG00000020670	-	86	53.933	ENSHCOG00000001308	-	68	53.933
ENSHCOG00000020670	-	72	50.000	ENSHCOG00000001300	-	77	50.000
ENSHCOG00000020670	-	79	50.562	ENSHCOG00000014881	-	56	50.562
ENSHCOG00000020670	-	72	48.315	ENSHCOG00000001245	-	68	48.315
ENSHCOG00000020670	-	73	50.725	ENSHCOG00000008601	-	77	50.725
ENSHCOG00000020670	-	86	54.444	ENSHCOG00000020879	-	69	54.444
ENSHCOG00000020670	-	73	49.254	ENSHCOG00000008133	-	53	49.254
ENSHCOG00000020670	-	72	60.870	ENSHCOG00000015497	-	73	60.870
ENSHCOG00000020670	-	73	52.941	ENSHCOG00000015484	-	65	52.941
ENSHCOG00000020670	-	78	52.222	ENSHCOG00000014777	-	70	52.222
ENSHCOG00000020670	-	73	51.685	ENSHCOG00000015010	-	56	51.685
ENSHCOG00000020670	-	73	55.056	ENSHCOG00000001252	-	96	55.056
ENSHCOG00000020670	-	81	50.562	ENSHCOG00000001256	-	65	50.562
ENSHCOG00000020670	-	79	53.933	ENSHCOG00000015425	-	75	53.933
ENSHCOG00000020670	-	98	55.696	ENSHCOG00000019512	-	90	55.696
ENSHCOG00000020670	-	73	55.682	ENSHCOG00000007681	-	79	55.682
ENSHCOG00000020670	-	87	51.111	ENSHCOG00000015355	-	86	53.226
ENSHCOG00000020670	-	72	52.809	ENSHCOG00000014786	-	96	52.809
ENSHCOG00000020670	-	90	52.809	ENSHCOG00000001942	-	92	55.556
ENSHCOG00000020670	-	72	55.056	ENSHCOG00000012662	-	83	55.056
ENSHCOG00000020670	-	88	51.685	ENSHCOG00000015414	-	66	51.685
ENSHCOG00000020670	-	73	51.111	ENSHCOG00000008550	-	55	51.111
ENSHCOG00000020670	-	74	47.191	ENSHCOG00000007351	-	75	47.191
ENSHCOG00000020670	-	72	53.933	ENSHCOG00000007358	-	71	53.933
ENSHCOG00000020670	-	73	59.551	ENSHCOG00000019006	-	52	59.551
ENSHCOG00000020670	-	85	50.562	ENSHCOG00000019001	-	67	50.562

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000020670	-	72	54.762	ENSAPOG00000019138	-	56	54.762	Acanthochromis_polyacanthus
ENSHCOG00000020670	-	73	43.956	ENSACIG00000017892	-	70	43.956	Amphilophus_citrinellus
ENSHCOG00000020670	-	89	46.667	ENSACIG00000006826	-	57	46.667	Amphilophus_citrinellus
ENSHCOG00000020670	-	72	53.226	ENSACIG00000004641	-	55	53.226	Amphilophus_citrinellus
ENSHCOG00000020670	-	90	50.000	ENSAOCG00000016897	-	64	50.000	Amphiprion_ocellaris
ENSHCOG00000020670	-	81	39.000	ENSAOCG00000001325	-	66	39.000	Amphiprion_ocellaris
ENSHCOG00000020670	-	90	50.000	ENSAPEG00000001556	-	64	50.000	Amphiprion_percula
ENSHCOG00000020670	-	73	45.679	ENSAPEG00000010013	-	54	45.679	Amphiprion_percula
ENSHCOG00000020670	-	94	43.529	ENSATEG00000018931	-	76	43.529	Anabas_testudineus
ENSHCOG00000020670	-	84	47.059	ENSACLG00000019154	-	99	47.059	Astatotilapia_calliptera
ENSHCOG00000020670	-	72	45.455	ENSACLG00000011658	-	60	45.455	Astatotilapia_calliptera
ENSHCOG00000020670	-	73	45.833	ENSCING00000002128	zf(c2h2)-35	62	45.833	Ciona_intestinalis
ENSHCOG00000020670	-	73	53.933	ENSCSEG00000010453	-	56	53.933	Cynoglossus_semilaevis
ENSHCOG00000020670	-	73	47.619	ENSCSEG00000015593	-	91	47.619	Cynoglossus_semilaevis
ENSHCOG00000020670	-	73	51.562	ENSCVAG00000006653	-	57	51.562	Cyprinodon_variegatus
ENSHCOG00000020670	-	73	41.791	ENSCVAG00000020141	-	61	41.791	Cyprinodon_variegatus
ENSHCOG00000020670	-	72	51.685	ENSCVAG00000012682	-	71	51.685	Cyprinodon_variegatus
ENSHCOG00000020670	-	73	49.438	ENSCVAG00000015616	-	73	49.438	Cyprinodon_variegatus
ENSHCOG00000020670	-	73	48.315	ENSCVAG00000003250	-	62	48.315	Cyprinodon_variegatus
ENSHCOG00000020670	-	73	49.438	ENSEBUG00000014432	-	64	49.438	Eptatretus_burgeri
ENSHCOG00000020670	-	73	46.914	ENSEBUG00000007931	-	60	46.914	Eptatretus_burgeri
ENSHCOG00000020670	-	75	43.820	ENSELUG00000001909	-	79	41.176	Esox_lucius
ENSHCOG00000020670	-	73	47.191	ENSELUG00000024007	-	55	47.191	Esox_lucius
ENSHCOG00000020670	-	72	49.412	ENSGAFG00000001879	-	56	49.412	Gambusia_affinis
ENSHCOG00000020670	-	73	48.889	ENSGAFG00000008204	-	60	48.889	Gambusia_affinis
ENSHCOG00000020670	-	72	50.877	ENSGAFG00000007528	-	50	50.877	Gambusia_affinis
ENSHCOG00000020670	-	83	39.326	ENSHBUG00000006656	-	60	39.326	Haplochromis_burtoni
ENSHCOG00000020670	-	96	41.379	ENSKMAG00000007699	-	76	38.372	Kryptolebias_marmoratus
ENSHCOG00000020670	-	95	44.928	ENSLBEG00000007106	-	77	44.928	Labrus_bergylta
ENSHCOG00000020670	-	73	41.558	ENSLBEG00000006161	-	72	41.558	Labrus_bergylta
ENSHCOG00000020670	-	98	46.774	ENSLBEG00000001132	-	67	46.774	Labrus_bergylta
ENSHCOG00000020670	-	73	43.038	ENSLBEG00000017424	-	90	43.038	Labrus_bergylta
ENSHCOG00000020670	-	86	45.977	ENSLOCG00000004208	-	94	45.977	Lepisosteus_oculatus
ENSHCOG00000020670	-	72	46.067	ENSMAMG00000017939	-	68	46.067	Mastacembelus_armatus
ENSHCOG00000020670	-	73	41.429	ENSMZEG00005013907	-	74	41.429	Maylandia_zebra
ENSHCOG00000020670	-	72	45.614	ENSMMOG00000013330	-	56	43.284	Mola_mola
ENSHCOG00000020670	-	72	48.148	ENSMALG00000004279	-	63	48.148	Monopterus_albus
ENSHCOG00000020670	-	72	56.757	ENSORLG00000021885	-	62	49.180	Oryzias_latipes
ENSHCOG00000020670	-	92	44.615	ENSORLG00000002268	-	68	44.615	Oryzias_latipes
ENSHCOG00000020670	-	73	42.222	ENSORLG00020018921	-	69	42.697	Oryzias_latipes_hni
ENSHCOG00000020670	-	73	50.820	ENSORLG00015018099	-	61	50.820	Oryzias_latipes_hsok
ENSHCOG00000020670	-	73	45.882	ENSOMEG00000005578	-	67	45.882	Oryzias_melastigma
ENSHCOG00000020670	-	72	53.933	ENSPMGG00000002661	-	61	53.933	Periophthalmus_magnuspinnatus
ENSHCOG00000020670	-	81	52.941	ENSPMGG00000009571	-	73	52.941	Periophthalmus_magnuspinnatus
ENSHCOG00000020670	-	90	43.820	ENSPMGG00000002455	-	80	43.820	Periophthalmus_magnuspinnatus
ENSHCOG00000020670	-	84	47.059	ENSPMGG00000002659	-	70	47.059	Periophthalmus_magnuspinnatus
ENSHCOG00000020670	-	85	36.000	ENSPMGG00000019750	-	76	36.000	Periophthalmus_magnuspinnatus
ENSHCOG00000020670	-	73	37.838	ENSPMAG00000002022	-	91	41.379	Petromyzon_marinus
ENSHCOG00000020670	-	73	38.202	ENSPMAG00000004189	-	87	38.202	Petromyzon_marinus
ENSHCOG00000020670	-	73	39.726	ENSPMAG00000000839	-	84	39.726	Petromyzon_marinus
ENSHCOG00000020670	-	73	49.438	ENSPFOG00000018860	-	98	49.438	Poecilia_formosa
ENSHCOG00000020670	-	72	50.000	ENSPFOG00000009491	-	52	50.000	Poecilia_formosa
ENSHCOG00000020670	-	72	49.438	ENSPLAG00000008941	-	77	49.438	Poecilia_latipinna
ENSHCOG00000020670	-	73	51.648	ENSPLAG00000010067	-	63	51.648	Poecilia_latipinna
ENSHCOG00000020670	-	72	48.101	ENSPLAG00000014832	-	72	48.101	Poecilia_latipinna
ENSHCOG00000020670	-	87	48.052	ENSPMEG00000024117	-	52	50.000	Poecilia_mexicana
ENSHCOG00000020670	-	72	48.101	ENSPMEG00000005210	-	72	48.101	Poecilia_mexicana
ENSHCOG00000020670	-	72	46.970	ENSPMEG00000002953	-	52	46.970	Poecilia_mexicana
ENSHCOG00000020670	-	82	45.161	ENSPREG00000002603	-	52	45.161	Poecilia_reticulata
ENSHCOG00000020670	-	74	43.182	ENSPREG00000009488	-	90	43.182	Poecilia_reticulata
ENSHCOG00000020670	-	85	43.396	ENSPNAG00000005946	-	79	37.624	Pygocentrus_nattereri
ENSHCOG00000020670	-	72	47.059	ENSSFOG00015011531	-	83	44.118	Scleropages_formosus
ENSHCOG00000020670	-	75	51.429	ENSSMAG00000013291	-	89	42.045	Scophthalmus_maximus
ENSHCOG00000020670	-	72	43.956	ENSSLDG00000014436	-	70	43.956	Seriola_lalandi_dorsalis
ENSHCOG00000020670	-	73	46.667	ENSSPAG00000011533	-	78	46.667	Stegastes_partitus
ENSHCOG00000020670	-	73	44.444	ENSSPAG00000011544	-	51	44.444	Stegastes_partitus
ENSHCOG00000020670	-	73	41.379	ENSXETG00000012506	znf91	76	41.379	Xenopus_tropicalis
ENSHCOG00000020670	-	90	44.944	ENSXCOG00000003441	-	62	44.944	Xiphophorus_couchianus
ENSHCOG00000020670	-	72	46.341	ENSXCOG00000020768	-	63	46.341	Xiphophorus_couchianus
ENSHCOG00000020670	-	72	49.296	ENSXCOG00000000254	-	58	49.296	Xiphophorus_couchianus