EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000020937 (Gene tree)
Gene ID: 109515155
Gene Symbol: pop4
Alias: zgc:110597
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 13782 bases
Position: chrKV879657.1:102596-116377
Accession: 109515155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000028352	UPF0086	PF01868.16	7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000025384	-	1245	XM_019869155	ENSHCOP00000028352	221 (aa)	XP_019724714	UPI00094EEFB8

Gene Model

Click here to download ENSHCOG00000020937's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000020937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000020937	pop4	91	65.686	ENSG00000105171	POP4	99	76.842	Homo_sapiens
ENSHCOG00000020937	pop4	88	62.051	ENSAMEG00000018329	-	89	62.051	Ailuropoda_melanoleuca
ENSHCOG00000020937	pop4	88	58.376	ENSAMEG00000003172	-	88	58.376	Ailuropoda_melanoleuca
ENSHCOG00000020937	pop4	99	72.603	ENSACIG00000008358	pop4	99	72.603	Amphilophus_citrinellus
ENSHCOG00000020937	pop4	90	73.762	ENSAOCG00000010116	pop4	98	73.762	Amphiprion_ocellaris
ENSHCOG00000020937	pop4	100	72.321	ENSAPEG00000002829	pop4	94	72.321	Amphiprion_percula
ENSHCOG00000020937	pop4	99	75.113	ENSATEG00000013028	pop4	99	75.113	Anabas_testudineus
ENSHCOG00000020937	pop4	91	60.488	ENSAPLG00000014051	POP4	98	60.488	Anas_platyrhynchos
ENSHCOG00000020937	pop4	94	63.810	ENSANAG00000020295	POP4	94	63.810	Aotus_nancymaae
ENSHCOG00000020937	pop4	100	71.041	ENSACLG00000000526	pop4	100	71.041	Astatotilapia_calliptera
ENSHCOG00000020937	pop4	100	64.286	ENSAMXG00000002899	pop4	100	64.286	Astyanax_mexicanus
ENSHCOG00000020937	pop4	94	60.952	ENSBTAG00000002223	POP4	94	60.952	Bos_taurus
ENSHCOG00000020937	pop4	91	65.534	ENSCJAG00000046750	POP4	99	69.061	Callithrix_jacchus
ENSHCOG00000020937	pop4	77	67.059	ENSCAFG00000007630	POP4	93	67.059	Canis_familiaris
ENSHCOG00000020937	pop4	88	62.626	ENSCHIG00000016743	POP4	89	62.626	Capra_hircus
ENSHCOG00000020937	pop4	88	61.538	ENSTSYG00000003488	POP4	89	61.538	Carlito_syrichta
ENSHCOG00000020937	pop4	88	44.615	ENSCAPG00000011105	POP4	87	44.615	Cavia_aperea
ENSHCOG00000020937	pop4	88	63.077	ENSCPOG00000002992	POP4	89	63.077	Cavia_porcellus
ENSHCOG00000020937	pop4	86	56.085	ENSCCAG00000034244	-	87	57.368	Cebus_capucinus
ENSHCOG00000020937	pop4	91	66.176	ENSCCAG00000020285	-	92	66.176	Cebus_capucinus
ENSHCOG00000020937	pop4	91	65.025	ENSCATG00000036022	POP4	99	76.842	Cercocebus_atys
ENSHCOG00000020937	pop4	88	62.564	ENSCLAG00000013162	POP4	89	62.564	Chinchilla_lanigera
ENSHCOG00000020937	pop4	91	63.861	ENSCSAG00000004868	POP4	93	63.861	Chlorocebus_sabaeus
ENSHCOG00000020937	pop4	88	45.455	ENSCHOG00000002071	POP4	90	45.455	Choloepus_hoffmanni
ENSHCOG00000020937	pop4	99	56.306	ENSCPBG00000016132	POP4	99	56.306	Chrysemys_picta_bellii
ENSHCOG00000020937	pop4	85	33.503	ENSCING00000023871	-	95	33.503	Ciona_intestinalis
ENSHCOG00000020937	pop4	91	63.366	ENSCANG00000005924	POP4	100	63.366	Colobus_angolensis_palliatus
ENSHCOG00000020937	pop4	88	63.590	ENSCGRG00001017185	Pop4	89	64.796	Cricetulus_griseus_chok1gshd
ENSHCOG00000020937	pop4	88	63.590	ENSCGRG00000008155	Pop4	89	64.796	Cricetulus_griseus_crigri
ENSHCOG00000020937	pop4	99	63.014	ENSCSEG00000002946	pop4	99	63.014	Cynoglossus_semilaevis
ENSHCOG00000020937	pop4	100	51.570	ENSCVAG00000018602	POP4	96	51.570	Cyprinodon_variegatus
ENSHCOG00000020937	pop4	99	64.384	ENSDARG00000101472	pop4	99	64.384	Danio_rerio
ENSHCOG00000020937	pop4	88	62.626	ENSDNOG00000047663	POP4	78	62.626	Dasypus_novemcinctus
ENSHCOG00000020937	pop4	68	60.265	ENSDORG00000008577	Pop4	87	60.265	Dipodomys_ordii
ENSHCOG00000020937	pop4	71	31.548	FBgn0035831	CG8038	82	31.548	Drosophila_melanogaster
ENSHCOG00000020937	pop4	94	51.429	ENSETEG00000003607	POP4	95	51.429	Echinops_telfairi
ENSHCOG00000020937	pop4	92	39.614	ENSEBUG00000008575	pop4	92	39.614	Eptatretus_burgeri
ENSHCOG00000020937	pop4	95	42.982	ENSEBUG00000010447	pop4	87	43.860	Eptatretus_burgeri
ENSHCOG00000020937	pop4	68	44.371	ENSEBUG00000004305	pop4	91	39.437	Eptatretus_burgeri
ENSHCOG00000020937	pop4	94	69.231	ENSECAG00000020206	POP4	77	69.231	Equus_caballus
ENSHCOG00000020937	pop4	88	45.128	ENSEEUG00000013109	POP4	98	45.128	Erinaceus_europaeus
ENSHCOG00000020937	pop4	99	62.100	ENSELUG00000019812	pop4	99	62.100	Esox_lucius
ENSHCOG00000020937	pop4	88	62.564	ENSFCAG00000001619	POP4	89	62.564	Felis_catus
ENSHCOG00000020937	pop4	92	60.294	ENSFALG00000000206	POP4	91	60.294	Ficedula_albicollis
ENSHCOG00000020937	pop4	88	63.077	ENSFDAG00000017859	POP4	89	63.077	Fukomys_damarensis
ENSHCOG00000020937	pop4	96	61.860	ENSFHEG00000012745	pop4	96	61.860	Fundulus_heteroclitus
ENSHCOG00000020937	pop4	87	66.154	ENSGMOG00000000335	pop4	96	66.154	Gadus_morhua
ENSHCOG00000020937	pop4	99	57.991	ENSGALG00000041972	POP4	92	57.991	Gallus_gallus
ENSHCOG00000020937	pop4	80	65.363	ENSGAFG00000003571	pop4	99	65.363	Gambusia_affinis
ENSHCOG00000020937	pop4	100	69.955	ENSGACG00000014510	pop4	97	75.978	Gasterosteus_aculeatus
ENSHCOG00000020937	pop4	99	56.306	ENSGAGG00000024544	POP4	79	56.306	Gopherus_agassizii
ENSHCOG00000020937	pop4	91	65.196	ENSGGOG00000038346	POP4	92	65.196	Gorilla_gorilla
ENSHCOG00000020937	pop4	100	71.493	ENSHBUG00000021821	pop4	100	71.493	Haplochromis_burtoni
ENSHCOG00000020937	pop4	88	63.077	ENSHGLG00000015798	POP4	89	63.077	Heterocephalus_glaber_female
ENSHCOG00000020937	pop4	88	63.077	ENSHGLG00100009737	POP4	89	63.077	Heterocephalus_glaber_male
ENSHCOG00000020937	pop4	99	62.273	ENSIPUG00000013652	pop4	99	62.273	Ictalurus_punctatus
ENSHCOG00000020937	pop4	94	60.870	ENSSTOG00000011016	POP4	94	60.870	Ictidomys_tridecemlineatus
ENSHCOG00000020937	pop4	88	62.564	ENSJJAG00000013376	Pop4	89	62.121	Jaculus_jaculus
ENSHCOG00000020937	pop4	100	73.543	ENSKMAG00000012250	pop4	100	73.543	Kryptolebias_marmoratus
ENSHCOG00000020937	pop4	100	65.471	ENSLBEG00000014139	pop4	100	65.919	Labrus_bergylta
ENSHCOG00000020937	pop4	100	65.471	ENSLBEG00000018846	-	100	65.919	Labrus_bergylta
ENSHCOG00000020937	pop4	98	55.455	ENSLACG00000008581	POP4	98	55.455	Latimeria_chalumnae
ENSHCOG00000020937	pop4	99	62.273	ENSLOCG00000005597	pop4	99	62.385	Lepisosteus_oculatus
ENSHCOG00000020937	pop4	94	60.870	ENSLAFG00000000084	POP4	94	60.870	Loxodonta_africana
ENSHCOG00000020937	pop4	91	63.861	ENSMFAG00000029606	POP4	92	63.861	Macaca_fascicularis
ENSHCOG00000020937	pop4	91	65.025	ENSMMUG00000017424	POP4	92	65.025	Macaca_mulatta
ENSHCOG00000020937	pop4	91	65.025	ENSMNEG00000031374	POP4	92	65.025	Macaca_nemestrina
ENSHCOG00000020937	pop4	91	63.861	ENSMLEG00000043454	POP4	92	65.517	Mandrillus_leucophaeus
ENSHCOG00000020937	pop4	99	75.566	ENSMAMG00000011716	pop4	99	75.566	Mastacembelus_armatus
ENSHCOG00000020937	pop4	100	71.041	ENSMZEG00005002360	pop4	100	71.041	Maylandia_zebra
ENSHCOG00000020937	pop4	100	57.014	ENSMGAG00000005337	POP4	99	57.014	Meleagris_gallopavo
ENSHCOG00000020937	pop4	88	63.077	ENSMAUG00000020110	Pop4	89	63.077	Mesocricetus_auratus
ENSHCOG00000020937	pop4	94	60.870	ENSMICG00000035730	POP4	93	60.870	Microcebus_murinus
ENSHCOG00000020937	pop4	99	73.973	ENSMMOG00000015321	pop4	99	74.886	Mola_mola
ENSHCOG00000020937	pop4	94	64.762	ENSMODG00000029406	POP4	90	64.762	Monodelphis_domestica
ENSHCOG00000020937	pop4	100	75.566	ENSMALG00000012571	pop4	100	75.566	Monopterus_albus
ENSHCOG00000020937	pop4	88	65.816	MGP_CAROLIEiJ_G0029600	Pop4	89	65.816	Mus_caroli
ENSHCOG00000020937	pop4	88	64.796	ENSMUSG00000030423	Pop4	89	64.796	Mus_musculus
ENSHCOG00000020937	pop4	88	64.103	MGP_SPRETEiJ_G0030699	Pop4	89	65.306	Mus_spretus
ENSHCOG00000020937	pop4	94	59.903	ENSMPUG00000008041	-	92	59.903	Mustela_putorius_furo
ENSHCOG00000020937	pop4	94	54.327	ENSMPUG00000008063	-	92	54.327	Mustela_putorius_furo
ENSHCOG00000020937	pop4	94	46.154	ENSMLUG00000010774	POP4	94	46.154	Myotis_lucifugus
ENSHCOG00000020937	pop4	57	71.200	ENSMEUG00000003636	-	100	71.200	Notamacropus_eugenii
ENSHCOG00000020937	pop4	88	65.641	ENSOPRG00000004736	POP4	98	65.641	Ochotona_princeps
ENSHCOG00000020937	pop4	88	62.051	ENSODEG00000013025	POP4	92	62.051	Octodon_degus
ENSHCOG00000020937	pop4	99	71.689	ENSONIG00000003458	pop4	97	71.689	Oreochromis_niloticus
ENSHCOG00000020937	pop4	88	64.615	ENSOCUG00000015974	POP4	89	64.615	Oryctolagus_cuniculus
ENSHCOG00000020937	pop4	99	68.326	ENSORLG00000020317	pop4	99	68.326	Oryzias_latipes
ENSHCOG00000020937	pop4	100	68.161	ENSORLG00015011624	pop4	100	68.161	Oryzias_latipes_hsok
ENSHCOG00000020937	pop4	100	68.161	ENSOMEG00000002538	pop4	100	68.161	Oryzias_melastigma
ENSHCOG00000020937	pop4	94	63.285	ENSOGAG00000011168	POP4	94	64.423	Otolemur_garnettii
ENSHCOG00000020937	pop4	88	62.626	ENSOARG00000004041	POP4	88	62.626	Ovis_aries
ENSHCOG00000020937	pop4	91	65.196	ENSPPAG00000040372	POP4	92	65.196	Pan_paniscus
ENSHCOG00000020937	pop4	88	62.564	ENSPPRG00000010502	POP4	89	62.564	Panthera_pardus
ENSHCOG00000020937	pop4	88	62.564	ENSPTIG00000016598	POP4	89	62.564	Panthera_tigris_altaica
ENSHCOG00000020937	pop4	91	65.196	ENSPTRG00000010779	POP4	92	65.196	Pan_troglodytes
ENSHCOG00000020937	pop4	91	63.861	ENSPANG00000008546	POP4	92	63.861	Papio_anubis
ENSHCOG00000020937	pop4	100	60.444	ENSPKIG00000004468	pop4	98	60.444	Paramormyrops_kingsleyae
ENSHCOG00000020937	pop4	99	57.466	ENSPSIG00000015690	POP4	100	60.488	Pelodiscus_sinensis
ENSHCOG00000020937	pop4	90	61.951	ENSPMGG00000008608	pop4	98	62.927	Periophthalmus_magnuspinnatus
ENSHCOG00000020937	pop4	88	52.821	ENSPEMG00000019982	-	88	52.821	Peromyscus_maniculatus_bairdii
ENSHCOG00000020937	pop4	92	62.069	ENSPEMG00000014034	-	93	62.069	Peromyscus_maniculatus_bairdii
ENSHCOG00000020937	pop4	66	62.069	ENSPMAG00000006265	pop4	98	51.031	Petromyzon_marinus
ENSHCOG00000020937	pop4	94	62.857	ENSPCIG00000024738	POP4	90	62.857	Phascolarctos_cinereus
ENSHCOG00000020937	pop4	100	69.369	ENSPFOG00000000925	pop4	100	69.369	Poecilia_formosa
ENSHCOG00000020937	pop4	100	68.919	ENSPLAG00000003161	pop4	100	68.919	Poecilia_latipinna
ENSHCOG00000020937	pop4	100	69.369	ENSPMEG00000002475	pop4	100	69.369	Poecilia_mexicana
ENSHCOG00000020937	pop4	99	67.273	ENSPREG00000022403	pop4	93	67.273	Poecilia_reticulata
ENSHCOG00000020937	pop4	91	65.686	ENSPPYG00000009805	POP4	92	65.686	Pongo_abelii
ENSHCOG00000020937	pop4	91	59.804	ENSPCAG00000007737	POP4	92	59.804	Procavia_capensis
ENSHCOG00000020937	pop4	94	60.870	ENSPCOG00000018055	POP4	94	60.870	Propithecus_coquereli
ENSHCOG00000020937	pop4	94	58.454	ENSPVAG00000006069	POP4	94	58.454	Pteropus_vampyrus
ENSHCOG00000020937	pop4	100	71.041	ENSPNYG00000020038	pop4	100	71.041	Pundamilia_nyererei
ENSHCOG00000020937	pop4	99	64.545	ENSPNAG00000005591	pop4	99	64.545	Pygocentrus_nattereri
ENSHCOG00000020937	pop4	88	66.327	ENSRNOG00000027646	Pop4	89	66.327	Rattus_norvegicus
ENSHCOG00000020937	pop4	72	59.748	ENSRBIG00000044769	POP4	86	65.185	Rhinopithecus_bieti
ENSHCOG00000020937	pop4	91	63.861	ENSRROG00000028903	POP4	92	63.861	Rhinopithecus_roxellana
ENSHCOG00000020937	pop4	57	32.143	YBR257W	-	50	32.143	Saccharomyces_cerevisiae
ENSHCOG00000020937	pop4	91	66.667	ENSSBOG00000032445	POP4	92	66.667	Saimiri_boliviensis_boliviensis
ENSHCOG00000020937	pop4	94	63.333	ENSSHAG00000016888	POP4	94	63.333	Sarcophilus_harrisii
ENSHCOG00000020937	pop4	98	60.455	ENSSFOG00015014556	pop4	97	60.455	Scleropages_formosus
ENSHCOG00000020937	pop4	100	73.543	ENSSMAG00000016611	pop4	100	73.543	Scophthalmus_maximus
ENSHCOG00000020937	pop4	100	74.107	ENSSDUG00000019865	pop4	90	74.107	Seriola_dumerili
ENSHCOG00000020937	pop4	100	72.768	ENSSLDG00000001763	pop4	100	72.768	Seriola_lalandi_dorsalis
ENSHCOG00000020937	pop4	94	61.353	ENSSARG00000004748	POP4	95	61.353	Sorex_araneus
ENSHCOG00000020937	pop4	100	75.446	ENSSPAG00000014364	pop4	100	75.446	Stegastes_partitus
ENSHCOG00000020937	pop4	88	64.103	ENSSSCG00000002854	POP4	89	64.103	Sus_scrofa
ENSHCOG00000020937	pop4	90	60.000	ENSTGUG00000008953	POP4	100	60.000	Taeniopygia_guttata
ENSHCOG00000020937	pop4	91	70.936	ENSTNIG00000006401	pop4	100	70.936	Tetraodon_nigroviridis
ENSHCOG00000020937	pop4	89	64.000	ENSTBEG00000002194	POP4	89	64.000	Tupaia_belangeri
ENSHCOG00000020937	pop4	88	63.077	ENSTTRG00000005882	POP4	89	63.077	Tursiops_truncatus
ENSHCOG00000020937	pop4	88	62.564	ENSUAMG00000003049	-	89	62.564	Ursus_americanus
ENSHCOG00000020937	pop4	88	62.564	ENSUMAG00000007522	-	89	62.564	Ursus_maritimus
ENSHCOG00000020937	pop4	88	61.538	ENSVVUG00000016876	-	68	61.538	Vulpes_vulpes
ENSHCOG00000020937	pop4	96	57.209	ENSXETG00000017598	pop4	96	57.674	Xenopus_tropicalis
ENSHCOG00000020937	pop4	99	67.117	ENSXCOG00000017695	pop4	93	67.117	Xiphophorus_couchianus
ENSHCOG00000020937	pop4	99	67.117	ENSXMAG00000013862	pop4	93	67.117	Xiphophorus_maculatus