EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000021167 (Gene tree)
Gene ID: 109525307
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5848 bases
Position: chrKV880238.1:668624-674471
Accession: 109525307
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000058	zf-C2H2	PF00096.26	8.2e-12	1	2
ENSHCOP00000000058	zf-C2H2	PF00096.26	8.2e-12	2	2
ENSHCOP00000000058	zf-met	PF12874.7	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014416	-	1053	XM_019885729	ENSHCOP00000000058	350 (aa)	XP_019741288	-

Gene Model

Click here to download ENSHCOG00000021167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000021167's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000021167	-	54	39.759	ENSHCOG00000020309	-	59	39.759
ENSHCOG00000021167	-	67	39.326	ENSHCOG00000012131	prdm5	89	39.326
ENSHCOG00000021167	-	93	74.640	ENSHCOG00000003663	prdm12b	100	69.424
ENSHCOG00000021167	-	71	44.444	ENSHCOG00000015241	-	81	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000021167	-	95	75.882	ENSG00000130711	PRDM12	99	72.118	Homo_sapiens
ENSHCOG00000021167	-	100	69.666	ENSAPOG00000016051	prdm12b	100	71.208	Acanthochromis_polyacanthus
ENSHCOG00000021167	-	100	65.768	ENSAPOG00000018234	-	100	66.307	Acanthochromis_polyacanthus
ENSHCOG00000021167	-	92	77.301	ENSAMEG00000016234	PRDM12	99	77.301	Ailuropoda_melanoleuca
ENSHCOG00000021167	-	100	70.526	ENSACIG00000019578	prdm12b	100	71.842	Amphilophus_citrinellus
ENSHCOG00000021167	-	100	74.219	ENSACIG00000005193	-	100	74.740	Amphilophus_citrinellus
ENSHCOG00000021167	-	100	71.204	ENSAOCG00000015040	prdm12b	100	72.775	Amphiprion_ocellaris
ENSHCOG00000021167	-	100	73.615	ENSAPEG00000022849	-	99	75.198	Amphiprion_percula
ENSHCOG00000021167	-	100	71.768	ENSAPEG00000015092	prdm12b	100	73.351	Amphiprion_percula
ENSHCOG00000021167	-	100	72.123	ENSATEG00000014595	-	96	78.806	Anabas_testudineus
ENSHCOG00000021167	-	95	75.953	ENSANAG00000020616	PRDM12	98	75.953	Aotus_nancymaae
ENSHCOG00000021167	-	100	71.250	ENSACLG00000007631	-	100	73.750	Astatotilapia_calliptera
ENSHCOG00000021167	-	100	76.111	ENSACLG00000011876	prdm12b	100	76.111	Astatotilapia_calliptera
ENSHCOG00000021167	-	100	75.556	ENSAMXG00000008540	PRDM12	100	75.556	Astyanax_mexicanus
ENSHCOG00000021167	-	100	72.296	ENSAMXG00000033665	prdm12b	100	73.087	Astyanax_mexicanus
ENSHCOG00000021167	-	95	76.176	ENSBTAG00000023797	PRDM12	99	73.569	Bos_taurus
ENSHCOG00000021167	-	95	75.882	ENSCJAG00000020540	PRDM12	99	73.224	Callithrix_jacchus
ENSHCOG00000021167	-	77	82.734	ENSCAFG00000023076	PRDM12	96	78.247	Canis_familiaris
ENSHCOG00000021167	-	95	76.176	ENSCAFG00020024046	PRDM12	99	72.973	Canis_lupus_dingo
ENSHCOG00000021167	-	95	76.176	ENSCHIG00000025005	PRDM12	99	73.370	Capra_hircus
ENSHCOG00000021167	-	89	76.489	ENSCPOG00000005901	PRDM12	95	76.489	Cavia_porcellus
ENSHCOG00000021167	-	95	75.882	ENSCCAG00000037485	PRDM12	99	72.900	Cebus_capucinus
ENSHCOG00000021167	-	95	75.882	ENSCATG00000020327	PRDM12	99	72.900	Cercocebus_atys
ENSHCOG00000021167	-	95	75.882	ENSCLAG00000005499	PRDM12	91	75.882	Chinchilla_lanigera
ENSHCOG00000021167	-	95	75.882	ENSCSAG00000014756	PRDM12	99	72.703	Chlorocebus_sabaeus
ENSHCOG00000021167	-	100	74.862	ENSCPBG00000022628	PRDM12	99	74.862	Chrysemys_picta_bellii
ENSHCOG00000021167	-	95	76.471	ENSCGRG00001015005	Prdm12	99	72.849	Cricetulus_griseus_chok1gshd
ENSHCOG00000021167	-	100	71.129	ENSCVAG00000017166	prdm12b	100	72.441	Cyprinodon_variegatus
ENSHCOG00000021167	-	100	73.282	ENSCVAG00000000944	-	100	73.282	Cyprinodon_variegatus
ENSHCOG00000021167	-	100	74.667	ENSDARG00000007430	prdm12b	100	74.667	Danio_rerio
ENSHCOG00000021167	-	95	75.660	ENSDNOG00000042302	PRDM12	95	76.012	Dasypus_novemcinctus
ENSHCOG00000021167	-	87	62.757	ENSEBUG00000016780	prdm12b	74	64.223	Eptatretus_burgeri
ENSHCOG00000021167	-	95	76.246	ENSEASG00005008472	PRDM12	99	73.370	Equus_asinus_asinus
ENSHCOG00000021167	-	95	76.246	ENSECAG00000005933	PRDM12	99	73.370	Equus_caballus
ENSHCOG00000021167	-	100	73.481	ENSELUG00000013674	PRDM12	99	73.481	Esox_lucius
ENSHCOG00000021167	-	100	72.632	ENSELUG00000009905	prdm12b	100	72.632	Esox_lucius
ENSHCOG00000021167	-	95	76.176	ENSFCAG00000043086	PRDM12	99	73.171	Felis_catus
ENSHCOG00000021167	-	100	75.207	ENSFALG00000001445	PRDM12	89	75.207	Ficedula_albicollis
ENSHCOG00000021167	-	100	70.341	ENSFHEG00000003944	prdm12b	100	71.916	Fundulus_heteroclitus
ENSHCOG00000021167	-	100	74.870	ENSFHEG00000007746	-	100	75.648	Fundulus_heteroclitus
ENSHCOG00000021167	-	93	75.749	ENSGMOG00000011797	prdm12b	99	73.554	Gadus_morhua
ENSHCOG00000021167	-	100	75.207	ENSGALG00000003895	PRDM12	99	75.207	Gallus_gallus
ENSHCOG00000021167	-	100	71.354	ENSGAFG00000010827	prdm12b	99	72.396	Gambusia_affinis
ENSHCOG00000021167	-	100	71.693	ENSGACG00000016713	prdm12b	99	71.693	Gasterosteus_aculeatus
ENSHCOG00000021167	-	100	74.862	ENSGAGG00000014083	PRDM12	99	74.862	Gopherus_agassizii
ENSHCOG00000021167	-	95	75.588	ENSGGOG00000010568	PRDM12	99	72.043	Gorilla_gorilla
ENSHCOG00000021167	-	100	71.250	ENSHBUG00000022537	-	93	73.750	Haplochromis_burtoni
ENSHCOG00000021167	-	100	72.944	ENSHBUG00000022878	prdm12b	100	72.944	Haplochromis_burtoni
ENSHCOG00000021167	-	94	76.716	ENSHGLG00000013939	PRDM12	99	72.237	Heterocephalus_glaber_female
ENSHCOG00000021167	-	100	72.414	ENSIPUG00000017053	prdm12b	100	74.005	Ictalurus_punctatus
ENSHCOG00000021167	-	100	70.889	ENSIPUG00000019544	PRDM12	100	70.889	Ictalurus_punctatus
ENSHCOG00000021167	-	97	75.645	ENSSTOG00000005986	PRDM12	90	75.645	Ictidomys_tridecemlineatus
ENSHCOG00000021167	-	99	73.729	ENSJJAG00000005424	Prdm12	99	76.716	Jaculus_jaculus
ENSHCOG00000021167	-	93	83.939	ENSKMAG00000021205	-	99	80.453	Kryptolebias_marmoratus
ENSHCOG00000021167	-	100	65.937	ENSKMAG00000016921	prdm12b	100	66.423	Kryptolebias_marmoratus
ENSHCOG00000021167	-	100	70.390	ENSLBEG00000017769	prdm12b	100	71.948	Labrus_bergylta
ENSHCOG00000021167	-	100	74.359	ENSLBEG00000007776	-	100	75.385	Labrus_bergylta
ENSHCOG00000021167	-	100	75.482	ENSLACG00000017560	PRDM12	99	75.482	Latimeria_chalumnae
ENSHCOG00000021167	-	100	73.190	ENSLOCG00000005429	prdm12b	99	74.462	Lepisosteus_oculatus
ENSHCOG00000021167	-	95	74.855	ENSLAFG00000006979	PRDM12	91	74.928	Loxodonta_africana
ENSHCOG00000021167	-	100	71.046	ENSMFAG00000040322	PRDM12	99	72.386	Macaca_fascicularis
ENSHCOG00000021167	-	95	75.882	ENSMNEG00000037234	PRDM12	99	72.900	Macaca_nemestrina
ENSHCOG00000021167	-	100	72.727	ENSMAMG00000018988	-	100	75.844	Mastacembelus_armatus
ENSHCOG00000021167	-	100	70.419	ENSMAMG00000013212	prdm12b	100	71.990	Mastacembelus_armatus
ENSHCOG00000021167	-	100	70.896	ENSMZEG00005000415	PRDM12	100	73.383	Maylandia_zebra
ENSHCOG00000021167	-	98	75.070	ENSMGAG00000005438	PRDM12	98	75.070	Meleagris_gallopavo
ENSHCOG00000021167	-	100	73.046	ENSMAUG00000013040	Prdm12	99	73.046	Mesocricetus_auratus
ENSHCOG00000021167	-	95	76.246	ENSMICG00000015480	PRDM12	99	73.098	Microcebus_murinus
ENSHCOG00000021167	-	98	74.648	ENSMOCG00000021026	Prdm12	91	76.540	Microtus_ochrogaster
ENSHCOG00000021167	-	100	74.380	ENSMODG00000012108	PRDM12	99	74.380	Monodelphis_domestica
ENSHCOG00000021167	-	78	75.166	ENSMALG00000021901	prdm12b	93	75.166	Monopterus_albus
ENSHCOG00000021167	-	95	76.471	MGP_CAROLIEiJ_G0023414	Prdm12	99	73.046	Mus_caroli
ENSHCOG00000021167	-	95	76.471	ENSMUSG00000079466	Prdm12	99	73.046	Mus_musculus
ENSHCOG00000021167	-	95	76.471	MGP_PahariEiJ_G0024871	Prdm12	99	73.046	Mus_pahari
ENSHCOG00000021167	-	95	76.471	MGP_SPRETEiJ_G0024331	Prdm12	99	73.046	Mus_spretus
ENSHCOG00000021167	-	93	77.644	ENSNGAG00000018480	Prdm12	99	74.238	Nannospalax_galili
ENSHCOG00000021167	-	100	71.579	ENSNBRG00000006727	prdm12b	100	72.368	Neolamprologus_brichardi
ENSHCOG00000021167	-	100	72.480	ENSNBRG00000024312	-	100	74.387	Neolamprologus_brichardi
ENSHCOG00000021167	-	100	66.942	ENSMEUG00000003828	PRDM12	99	66.942	Notamacropus_eugenii
ENSHCOG00000021167	-	94	76.418	ENSOPRG00000008680	PRDM12	99	76.418	Ochotona_princeps
ENSHCOG00000021167	-	95	76.540	ENSODEG00000016282	PRDM12	63	76.540	Octodon_degus
ENSHCOG00000021167	-	59	76.959	ENSOANG00000001043	PRDM12	100	76.959	Ornithorhynchus_anatinus
ENSHCOG00000021167	-	84	78.477	ENSOCUG00000008241	PRDM12	96	78.477	Oryctolagus_cuniculus
ENSHCOG00000021167	-	100	71.094	ENSORLG00000007114	prdm12b	99	71.354	Oryzias_latipes
ENSHCOG00000021167	-	100	72.362	ENSORLG00000017558	-	100	73.924	Oryzias_latipes
ENSHCOG00000021167	-	100	69.171	ENSORLG00020019565	prdm12b	99	70.984	Oryzias_latipes_hni
ENSHCOG00000021167	-	100	71.930	ENSORLG00020013167	-	100	73.485	Oryzias_latipes_hni
ENSHCOG00000021167	-	100	72.362	ENSORLG00015003435	-	100	73.924	Oryzias_latipes_hsok
ENSHCOG00000021167	-	100	69.713	ENSORLG00015007621	prdm12b	99	71.540	Oryzias_latipes_hsok
ENSHCOG00000021167	-	100	69.072	ENSOMEG00000004134	prdm12b	99	70.543	Oryzias_melastigma
ENSHCOG00000021167	-	100	75.397	ENSOMEG00000007762	-	100	75.661	Oryzias_melastigma
ENSHCOG00000021167	-	95	76.106	ENSOGAG00000007557	PRDM12	99	76.106	Otolemur_garnettii
ENSHCOG00000021167	-	82	73.720	ENSPPAG00000031506	-	97	73.720	Pan_paniscus
ENSHCOG00000021167	-	100	68.681	ENSPPRG00000023024	PRDM12	92	68.681	Panthera_pardus
ENSHCOG00000021167	-	95	75.882	ENSPTRG00000043324	-	99	72.312	Pan_troglodytes
ENSHCOG00000021167	-	95	75.882	ENSPTRG00000021475	PRDM12	99	72.312	Pan_troglodytes
ENSHCOG00000021167	-	95	75.882	ENSPANG00000025967	PRDM12	99	72.900	Papio_anubis
ENSHCOG00000021167	-	100	73.228	ENSPKIG00000007228	prdm12b	100	73.753	Paramormyrops_kingsleyae
ENSHCOG00000021167	-	85	77.670	ENSPKIG00000004305	PRDM12	88	77.670	Paramormyrops_kingsleyae
ENSHCOG00000021167	-	100	76.243	ENSPSIG00000006739	PRDM12	99	76.243	Pelodiscus_sinensis
ENSHCOG00000021167	-	100	74.737	ENSPMGG00000002356	-	100	75.000	Periophthalmus_magnuspinnatus
ENSHCOG00000021167	-	100	72.340	ENSPMGG00000008867	prdm12b	99	74.263	Periophthalmus_magnuspinnatus
ENSHCOG00000021167	-	97	74.859	ENSPEMG00000009969	Prdm12	95	74.859	Peromyscus_maniculatus_bairdii
ENSHCOG00000021167	-	100	74.656	ENSPCIG00000024119	PRDM12	99	74.656	Phascolarctos_cinereus
ENSHCOG00000021167	-	100	72.251	ENSPFOG00000019841	prdm12b	100	72.251	Poecilia_formosa
ENSHCOG00000021167	-	100	70.801	ENSPLAG00000016626	prdm12b	95	74.309	Poecilia_latipinna
ENSHCOG00000021167	-	94	73.481	ENSPMEG00000016698	prdm12b	98	74.309	Poecilia_mexicana
ENSHCOG00000021167	-	89	84.013	ENSPREG00000003211	-	90	84.013	Poecilia_reticulata
ENSHCOG00000021167	-	100	70.361	ENSPREG00000015073	prdm12b	95	74.105	Poecilia_reticulata
ENSHCOG00000021167	-	98	74.148	ENSPPYG00000019694	PRDM12	98	74.148	Pongo_abelii
ENSHCOG00000021167	-	95	76.176	ENSPCOG00000022255	PRDM12	99	72.849	Propithecus_coquereli
ENSHCOG00000021167	-	95	76.176	ENSPVAG00000001511	PRDM12	99	72.581	Pteropus_vampyrus
ENSHCOG00000021167	-	100	72.966	ENSPNYG00000009607	prdm12b	100	72.966	Pundamilia_nyererei
ENSHCOG00000021167	-	100	70.896	ENSPNYG00000013589	-	100	73.383	Pundamilia_nyererei
ENSHCOG00000021167	-	100	73.740	ENSPNAG00000024532	prdm12b	100	74.536	Pygocentrus_nattereri
ENSHCOG00000021167	-	100	73.171	ENSPNAG00000013396	PRDM12	100	74.595	Pygocentrus_nattereri
ENSHCOG00000021167	-	95	76.471	ENSRNOG00000009218	Prdm12	99	73.046	Rattus_norvegicus
ENSHCOG00000021167	-	90	76.471	ENSRBIG00000042712	PRDM12	98	70.765	Rhinopithecus_bieti
ENSHCOG00000021167	-	91	76.758	ENSRROG00000043554	PRDM12	99	76.758	Rhinopithecus_roxellana
ENSHCOG00000021167	-	100	74.451	ENSSHAG00000015972	PRDM12	99	74.451	Sarcophilus_harrisii
ENSHCOG00000021167	-	100	69.289	ENSSMAG00000003754	prdm12b	100	70.051	Scophthalmus_maximus
ENSHCOG00000021167	-	92	80.675	ENSSDUG00000019071	-	100	74.036	Seriola_dumerili
ENSHCOG00000021167	-	100	70.909	ENSSDUG00000023498	prdm12b	100	70.909	Seriola_dumerili
ENSHCOG00000021167	-	100	70.649	ENSSLDG00000009557	prdm12b	100	70.909	Seriola_lalandi_dorsalis
ENSHCOG00000021167	-	100	78.492	ENSSLDG00000013562	-	100	78.771	Seriola_lalandi_dorsalis
ENSHCOG00000021167	-	100	75.138	ENSSPUG00000013424	PRDM12	99	75.138	Sphenodon_punctatus
ENSHCOG00000021167	-	100	68.464	ENSSPAG00000022420	-	100	70.081	Stegastes_partitus
ENSHCOG00000021167	-	100	70.496	ENSSPAG00000018824	prdm12b	100	71.540	Stegastes_partitus
ENSHCOG00000021167	-	95	76.176	ENSSSCG00000005703	PRDM12	99	72.973	Sus_scrofa
ENSHCOG00000021167	-	100	76.584	ENSTRUG00000013239	-	100	76.860	Takifugu_rubripes
ENSHCOG00000021167	-	100	72.654	ENSTRUG00000018659	prdm12b	100	73.458	Takifugu_rubripes
ENSHCOG00000021167	-	100	72.654	ENSTNIG00000009020	prdm12b	99	73.190	Tetraodon_nigroviridis
ENSHCOG00000021167	-	100	79.202	ENSTNIG00000005859	-	99	79.202	Tetraodon_nigroviridis
ENSHCOG00000021167	-	95	76.176	ENSUAMG00000009653	PRDM12	96	74.022	Ursus_americanus
ENSHCOG00000021167	-	94	76.716	ENSVVUG00000027662	PRDM12	78	76.716	Vulpes_vulpes
ENSHCOG00000021167	-	100	71.466	ENSXCOG00000002836	prdm12b	99	72.513	Xiphophorus_couchianus
ENSHCOG00000021167	-	100	70.649	ENSXMAG00000005537	prdm12b	100	71.688	Xiphophorus_maculatus
ENSHCOG00000021167	-	100	75.328	ENSXMAG00000028012	-	100	76.903	Xiphophorus_maculatus