EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000021170 (Gene tree)
Gene ID
109525149
Gene Symbol
-
Alias
-
Full Name
far upstream element-binding protein 3-like
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
5884 bases
Position
chrKV880238.1:678908-684791
Accession
109525149
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000000059KH_1PF00013.299e-6914
ENSHCOP00000000059KH_1PF00013.299e-6924
ENSHCOP00000000059KH_1PF00013.299e-6934
ENSHCOP00000000059KH_1PF00013.299e-6944
ENSHCOP00000000059KH_2PF07650.173.3e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000014420-1587XM_019885440ENSHCOP00000000059528 (aa)XP_019740999-
Gene Model
Click here to download ENSHCOG00000021170's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000021170's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000021170-6332.886ENSHCOG00000000818zgc:1100459232.886
ENSHCOG00000021170-7531.304ENSHCOG00000020951PCBP29534.783
ENSHCOG00000021170-9341.488ENSHCOG00000020488khsrp9442.617
ENSHCOG00000021170-6330.201ENSHCOG00000006067-9430.201
ENSHCOG00000021170-9756.326ENSHCOG00000003639FUBP39259.134
ENSHCOG00000021170-7861.538ENSHCOG00000000910fubp18950.377
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000021170-9761.444ENSG00000107164FUBP39861.484Homo_sapiens
ENSHCOG00000021170-9880.147ENSAPOG00000018241-9980.147Acanthochromis_polyacanthus
ENSHCOG00000021170-9756.842ENSAPOG00000016135fubp39756.326Acanthochromis_polyacanthus
ENSHCOG00000021170-9763.139ENSAMEG00000016193FUBP39763.380Ailuropoda_melanoleuca
ENSHCOG00000021170-9655.985ENSACIG00000019595fubp39057.977Amphilophus_citrinellus
ENSHCOG00000021170-9975.651ENSACIG00000005212-8875.651Amphilophus_citrinellus
ENSHCOG00000021170-9879.963ENSAOCG00000008429-9979.963Amphiprion_ocellaris
ENSHCOG00000021170-9756.842ENSAOCG00000015110fubp39756.326Amphiprion_ocellaris
ENSHCOG00000021170-9756.842ENSAPEG00000015125fubp39756.326Amphiprion_percula
ENSHCOG00000021170-9879.963ENSAPEG00000022868-9979.963Amphiprion_percula
ENSHCOG00000021170-9756.085ENSATEG00000018030fubp39756.790Anabas_testudineus
ENSHCOG00000021170-9978.545ENSATEG00000014618-9778.545Anabas_testudineus
ENSHCOG00000021170-8669.703ENSAPLG00000011238FUBP38370.190Anas_platyrhynchos
ENSHCOG00000021170-9761.444ENSANAG00000022905FUBP39861.863Aotus_nancymaae
ENSHCOG00000021170-9883.047ENSACLG00000007655-9978.285Astatotilapia_calliptera
ENSHCOG00000021170-9557.195ENSACLG00000011819fubp38557.741Astatotilapia_calliptera
ENSHCOG00000021170-9664.476ENSAMXG00000008318fubp39664.654Astyanax_mexicanus
ENSHCOG00000021170-9663.636ENSBTAG00000013072FUBP39862.500Bos_taurus
ENSHCOG00000021170-9762.345ENSCJAG00000020542FUBP39862.589Callithrix_jacchus
ENSHCOG00000021170-9761.081ENSCAFG00000019942FUBP39366.307Canis_familiaris
ENSHCOG00000021170-9664.103ENSCAFG00020024002FUBP39661.932Canis_lupus_dingo
ENSHCOG00000021170-9762.094ENSCHIG00000027228FUBP39562.162Capra_hircus
ENSHCOG00000021170-8661.587ENSTSYG00000028199FUBP39661.875Carlito_syrichta
ENSHCOG00000021170-8867.480ENSCAPG00000007144FUBP39067.748Cavia_aperea
ENSHCOG00000021170-9961.658ENSCPOG00000010315FUBP39962.069Cavia_porcellus
ENSHCOG00000021170-9761.972ENSCCAG00000036313FUBP39862.214Cebus_capucinus
ENSHCOG00000021170-9658.938ENSCATG00000015864FUBP39758.596Cercocebus_atys
ENSHCOG00000021170-9764.207ENSCLAG00000009005FUBP39764.641Chinchilla_lanigera
ENSHCOG00000021170-9761.444ENSCSAG00000014748FUBP39861.484Chlorocebus_sabaeus
ENSHCOG00000021170-6475.373ENSCHOG00000010987FUBP36277.037Choloepus_hoffmanni
ENSHCOG00000021170-9662.590ENSCPBG00000022635FUBP39862.567Chrysemys_picta_bellii
ENSHCOG00000021170-9761.444ENSCANG00000042975FUBP39861.484Colobus_angolensis_palliatus
ENSHCOG00000021170-9761.947ENSCGRG00001011076Fubp39862.544Cricetulus_griseus_chok1gshd
ENSHCOG00000021170-9761.879ENSCGRG00000001872Fubp39862.478Cricetulus_griseus_crigri
ENSHCOG00000021170-9879.228ENSCSEG00000008761-9979.228Cynoglossus_semilaevis
ENSHCOG00000021170-9656.506ENSCSEG00000017815FUBP39657.895Cynoglossus_semilaevis
ENSHCOG00000021170-6692.763ENSCVAG00000006510-9392.763Cyprinodon_variegatus
ENSHCOG00000021170-9756.063ENSCVAG00000017181FUBP39656.140Cyprinodon_variegatus
ENSHCOG00000021170-9861.121ENSDARG00000086896fubp39861.538Danio_rerio
ENSHCOG00000021170-8865.000ENSDNOG00000014533FUBP39565.374Dasypus_novemcinctus
ENSHCOG00000021170-9749.322ENSETEG00000008842FUBP38650.678Echinops_telfairi
ENSHCOG00000021170-9764.457ENSEASG00005008416FUBP39763.653Equus_asinus_asinus
ENSHCOG00000021170-9665.306ENSECAG00000011500FUBP39863.204Equus_caballus
ENSHCOG00000021170-8658.882ENSEEUG00000000550FUBP38859.491Erinaceus_europaeus
ENSHCOG00000021170-9866.850ENSELUG00000009949-9867.276Esox_lucius
ENSHCOG00000021170-9668.284ENSELUG00000013808fubp39667.276Esox_lucius
ENSHCOG00000021170-9762.434ENSFCAG00000005113FUBP39862.742Felis_catus
ENSHCOG00000021170-9370.536ENSFALG00000001444FUBP39770.419Ficedula_albicollis
ENSHCOG00000021170-8968.672ENSFDAG00000013466FUBP39369.151Fukomys_damarensis
ENSHCOG00000021170-9758.545ENSFHEG00000003957fubp39658.621Fundulus_heteroclitus
ENSHCOG00000021170-6782.474ENSFHEG00000006558-8582.474Fundulus_heteroclitus
ENSHCOG00000021170-9884.375ENSGMOG00000002653FUBP38684.375Gadus_morhua
ENSHCOG00000021170-9553.458ENSGMOG00000017047-8655.728Gadus_morhua
ENSHCOG00000021170-9661.879ENSGALG00000003941FUBP39862.234Gallus_gallus
ENSHCOG00000021170-8881.070ENSGAFG00000019255-9180.082Gambusia_affinis
ENSHCOG00000021170-9758.106ENSGAFG00000010840FUBP39658.182Gambusia_affinis
ENSHCOG00000021170-9966.667ENSGACG00000000957-9966.667Gasterosteus_aculeatus
ENSHCOG00000021170-9957.324ENSGACG00000016704fubp39758.348Gasterosteus_aculeatus
ENSHCOG00000021170-9664.074ENSGAGG00000014090FUBP39763.853Gopherus_agassizii
ENSHCOG00000021170-9761.268ENSGGOG00000011318FUBP39861.336Gorilla_gorilla
ENSHCOG00000021170-8893.458ENSHBUG00000022475-8193.458Haplochromis_burtoni
ENSHCOG00000021170-9557.195ENSHBUG00000022849fubp39258.672Haplochromis_burtoni
ENSHCOG00000021170-9761.972ENSHGLG00000014381-9861.972Heterocephalus_glaber_female
ENSHCOG00000021170-9558.724ENSHGLG00000014728-9459.363Heterocephalus_glaber_female
ENSHCOG00000021170-9469.703ENSIPUG00000019400FUBP39662.087Ictalurus_punctatus
ENSHCOG00000021170-9762.434ENSSTOG00000014105FUBP39862.676Ictidomys_tridecemlineatus
ENSHCOG00000021170-8668.116ENSJJAG00000009992Fubp38968.660Jaculus_jaculus
ENSHCOG00000021170-8757.613ENSKMAG00000016886fubp38758.436Kryptolebias_marmoratus
ENSHCOG00000021170-9877.532ENSKMAG00000021164-9977.532Kryptolebias_marmoratus
ENSHCOG00000021170-9756.180ENSLBEG00000017826FUBP39756.742Labrus_bergylta
ENSHCOG00000021170-9879.235ENSLBEG00000007845-9979.235Labrus_bergylta
ENSHCOG00000021170-9765.328ENSLACG00000017619FUBP39964.286Latimeria_chalumnae
ENSHCOG00000021170-9657.517ENSLOCG00000005411fubp39659.790Lepisosteus_oculatus
ENSHCOG00000021170-9762.324ENSLAFG00000011611FUBP39762.742Loxodonta_africana
ENSHCOG00000021170-9761.989ENSMFAG00000038309FUBP39861.687Macaca_fascicularis
ENSHCOG00000021170-9761.620ENSMMUG00000008249FUBP39861.687Macaca_mulatta
ENSHCOG00000021170-9761.989ENSMNEG00000039622FUBP39861.687Macaca_nemestrina
ENSHCOG00000021170-8667.149ENSMLEG00000037030FUBP38967.216Mandrillus_leucophaeus
ENSHCOG00000021170-9756.637ENSMAMG00000013259fubp39756.483Mastacembelus_armatus
ENSHCOG00000021170-9978.030ENSMAMG00000019009-9778.030Mastacembelus_armatus
ENSHCOG00000021170-9882.796ENSMZEG00005000329-9977.920Maylandia_zebra
ENSHCOG00000021170-8669.023ENSMGAG00000005342FUBP38869.502Meleagris_gallopavo
ENSHCOG00000021170-9762.014ENSMAUG00000012513Fubp39862.610Mesocricetus_auratus
ENSHCOG00000021170-9761.070ENSMICG00000034044-9760.958Microcebus_murinus
ENSHCOG00000021170-9762.367ENSMICG00000015452-9862.610Microcebus_murinus
ENSHCOG00000021170-9762.234ENSMOCG00000005635Fubp39862.301Microtus_ochrogaster
ENSHCOG00000021170-9981.203ENSMMOG00000020809-9781.203Mola_mola
ENSHCOG00000021170-9756.797ENSMMOG00000000105FUBP39558.621Mola_mola
ENSHCOG00000021170-9663.668ENSMODG00000012105FUBP39763.316Monodelphis_domestica
ENSHCOG00000021170-9877.941ENSMALG00000002993-9977.941Monopterus_albus
ENSHCOG00000021170-9758.724ENSMALG00000021819FUBP39757.609Monopterus_albus
ENSHCOG00000021170-9761.837MGP_CAROLIEiJ_G0023413Fubp39875.132Mus_caroli
ENSHCOG00000021170-9761.837ENSMUSG00000026843Fubp39875.132Mus_musculus
ENSHCOG00000021170-9761.484MGP_PahariEiJ_G0024870Fubp39874.074Mus_pahari
ENSHCOG00000021170-9761.837MGP_SPRETEiJ_G0024330Fubp39875.132Mus_spretus
ENSHCOG00000021170-9762.787ENSMPUG00000012692FUBP39863.028Mustela_putorius_furo
ENSHCOG00000021170-9759.859ENSMLUG00000008743FUBP39760.105Myotis_lucifugus
ENSHCOG00000021170-9762.832ENSNGAG00000016562Fubp39862.655Nannospalax_galili
ENSHCOG00000021170-8858.043ENSNBRG00000006751FUBP37758.696Neolamprologus_brichardi
ENSHCOG00000021170-9868.659ENSNBRG00000024313-9667.084Neolamprologus_brichardi
ENSHCOG00000021170-9261.781ENSNLEG00000012523FUBP39962.011Nomascus_leucogenys
ENSHCOG00000021170-8464.286ENSMEUG00000007862FUBP38655.505Notamacropus_eugenii
ENSHCOG00000021170-8668.660ENSOPRG00000008648FUBP38568.454Ochotona_princeps
ENSHCOG00000021170-9557.377ENSONIG00000002861fubp39258.856Oreochromis_niloticus
ENSHCOG00000021170-9975.610ENSONIG00000000666-9875.610Oreochromis_niloticus
ENSHCOG00000021170-8968.511ENSOANG00000001042FUBP39768.790Ornithorhynchus_anatinus
ENSHCOG00000021170-7763.758ENSOCUG00000006183FUBP38863.758Oryctolagus_cuniculus
ENSHCOG00000021170-9878.189ENSORLG00000017565-9978.558Oryzias_latipes
ENSHCOG00000021170-9756.766ENSORLG00000007103fubp39756.766Oryzias_latipes
ENSHCOG00000021170-9756.942ENSORLG00020019624fubp39756.942Oryzias_latipes_hni
ENSHCOG00000021170-9878.189ENSORLG00020013143-9978.558Oryzias_latipes_hni
ENSHCOG00000021170-9878.189ENSORLG00015003412-9978.558Oryzias_latipes_hsok
ENSHCOG00000021170-9756.942ENSORLG00015007684fubp39756.942Oryzias_latipes_hsok
ENSHCOG00000021170-9879.113ENSOMEG00000007725-9979.113Oryzias_melastigma
ENSHCOG00000021170-9757.866ENSOMEG00000004190fubp39757.118Oryzias_melastigma
ENSHCOG00000021170-9761.796ENSOGAG00000007555FUBP39861.796Otolemur_garnettii
ENSHCOG00000021170-8663.710ENSOARG00000007540FUBP38763.508Ovis_aries
ENSHCOG00000021170-9761.444ENSPPAG00000011103FUBP39861.484Pan_paniscus
ENSHCOG00000021170-8668.323ENSPPRG00000023251FUBP38968.660Panthera_pardus
ENSHCOG00000021170-8266.079ENSPTIG00000019979FUBP38968.750Panthera_tigris_altaica
ENSHCOG00000021170-9761.444ENSPTRG00000021474FUBP39861.484Pan_troglodytes
ENSHCOG00000021170-8967.442ENSPTRG00000044650-9767.511Pan_troglodytes
ENSHCOG00000021170-9761.812ENSPANG00000025968FUBP39861.484Papio_anubis
ENSHCOG00000021170-9665.399ENSPKIG00000004367fubp39667.063Paramormyrops_kingsleyae
ENSHCOG00000021170-9663.993ENSPKIG00000007267-9662.832Paramormyrops_kingsleyae
ENSHCOG00000021170-8671.024ENSPSIG00000006734FUBP38571.522Pelodiscus_sinensis
ENSHCOG00000021170-8475.161ENSPMGG00000016496-8075.161Periophthalmus_magnuspinnatus
ENSHCOG00000021170-9956.648ENSPMGG00000008874fubp39856.600Periophthalmus_magnuspinnatus
ENSHCOG00000021170-9761.593ENSPEMG00000019195Fubp39862.124Peromyscus_maniculatus_bairdii
ENSHCOG00000021170-9664.954ENSPCIG00000024114FUBP39765.138Phascolarctos_cinereus
ENSHCOG00000021170-9874.401ENSPFOG00000008400-9974.401Poecilia_formosa
ENSHCOG00000021170-9756.591ENSPFOG00000019842FUBP39756.667Poecilia_formosa
ENSHCOG00000021170-9875.265ENSPLAG00000008443-9974.427Poecilia_latipinna
ENSHCOG00000021170-8957.058ENSPLAG00000016612fubp38957.058Poecilia_latipinna
ENSHCOG00000021170-9674.157ENSPMEG00000014351-9974.157Poecilia_mexicana
ENSHCOG00000021170-10056.701ENSPMEG00000016672FUBP39856.701Poecilia_mexicana
ENSHCOG00000021170-9756.667ENSPREG00000015101FUBP39556.667Poecilia_reticulata
ENSHCOG00000021170-9974.128ENSPREG00000003168-9974.033Poecilia_reticulata
ENSHCOG00000021170-9761.444ENSPPYG00000019693FUBP39861.484Pongo_abelii
ENSHCOG00000021170-8466.667ENSPCAG00000001717FUBP38463.825Procavia_capensis
ENSHCOG00000021170-9762.081ENSPCOG00000022783FUBP39862.324Propithecus_coquereli
ENSHCOG00000021170-9762.081ENSPVAG00000001510FUBP39862.500Pteropus_vampyrus
ENSHCOG00000021170-9557.013ENSPNYG00000009567fubp38562.105Pundamilia_nyererei
ENSHCOG00000021170-9973.818ENSPNYG00000013607-9774.182Pundamilia_nyererei
ENSHCOG00000021170-9668.113ENSPNAG00000013478fubp39668.173Pygocentrus_nattereri
ENSHCOG00000021170-9761.170ENSRNOG00000009139Fubp39861.416Rattus_norvegicus
ENSHCOG00000021170-9761.444ENSRBIG00000042110-9861.484Rhinopithecus_bieti
ENSHCOG00000021170-9759.397ENSRBIG00000030864-9759.683Rhinopithecus_bieti
ENSHCOG00000021170-9761.444ENSRROG00000030006-9861.484Rhinopithecus_roxellana
ENSHCOG00000021170-9758.761ENSRROG00000032640-9859.011Rhinopithecus_roxellana
ENSHCOG00000021170-9647.658ENSSBOG00000021755FUBP39647.802Saimiri_boliviensis_boliviensis
ENSHCOG00000021170-8869.427ENSSHAG00000015689FUBP39669.639Sarcophilus_harrisii
ENSHCOG00000021170-9765.480ENSSFOG00015012455-9765.542Scleropages_formosus
ENSHCOG00000021170-9663.055ENSSFOG00015011098fubp39663.298Scleropages_formosus
ENSHCOG00000021170-9858.333ENSSMAG00000003793FUBP39858.877Scophthalmus_maximus
ENSHCOG00000021170-10078.777ENSSMAG00000017905-9979.228Scophthalmus_maximus
ENSHCOG00000021170-9976.667ENSSDUG00000005975-9975.528Seriola_dumerili
ENSHCOG00000021170-9758.545ENSSDUG00000023495fubp39757.469Seriola_dumerili
ENSHCOG00000021170-9888.546ENSSLDG00000013592-9088.546Seriola_lalandi_dorsalis
ENSHCOG00000021170-9758.258ENSSLDG00000009455FUBP39758.984Seriola_lalandi_dorsalis
ENSHCOG00000021170-9663.869ENSSPUG00000013444FUBP39763.834Sphenodon_punctatus
ENSHCOG00000021170-9756.667ENSSPAG00000018848fubp39757.368Stegastes_partitus
ENSHCOG00000021170-9880.147ENSSPAG00000022405-9980.147Stegastes_partitus
ENSHCOG00000021170-9662.923ENSSSCG00000005702FUBP39768.922Sus_scrofa
ENSHCOG00000021170-9659.381ENSTGUG00000004662FUBP39760.952Taeniopygia_guttata
ENSHCOG00000021170-9878.125ENSTRUG00000013259-9085.714Takifugu_rubripes
ENSHCOG00000021170-9756.569ENSTRUG00000018658fubp39357.299Takifugu_rubripes
ENSHCOG00000021170-8756.455ENSTNIG00000009019fubp37461.488Tetraodon_nigroviridis
ENSHCOG00000021170-9973.805ENSTNIG00000005858-10075.605Tetraodon_nigroviridis
ENSHCOG00000021170-9649.645ENSTTRG00000015138FUBP39749.735Tursiops_truncatus
ENSHCOG00000021170-9762.963ENSUAMG00000009671FUBP39863.204Ursus_americanus
ENSHCOG00000021170-8467.896ENSUMAG00000018745FUBP39470.748Ursus_maritimus
ENSHCOG00000021170-9362.847ENSVVUG00000027641FUBP39763.619Vulpes_vulpes
ENSHCOG00000021170-9664.391ENSXETG00000001344fubp39763.919Xenopus_tropicalis
ENSHCOG00000021170-9757.914ENSXCOG00000002806FUBP39757.914Xiphophorus_couchianus
ENSHCOG00000021170-9871.078ENSXCOG00000011765-9769.274Xiphophorus_couchianus
ENSHCOG00000021170-9974.165ENSXMAG00000000237-9873.333Xiphophorus_maculatus
ENSHCOG00000021170-9758.258ENSXMAG00000005541FUBP39758.258Xiphophorus_maculatus

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