EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000000493 (Gene tree)
Gene ID: -
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 8066 bases
Position: chrJH602143.1:94090-102155
Accession: 101705509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000000560	Gar1	PF04410.14	3.1e-39	1	1
ENSHGLP00000000561	Gar1	PF04410.14	6.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000000599	GAR1-201	2034	XM_004866202	ENSHGLP00000000560	209 (aa)	XP_004866259	UPI00034F326D
ENSHGLT00000000600	GAR1-202	231	-	ENSHGLP00000000561	76 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000000493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000000493's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000000493	GAR1	72	98.182	ENSAPOG00000019754	gar1	50	95.327	Acanthochromis_polyacanthus
ENSHGLG00000000493	GAR1	99	96.053	ENSAMEG00000004605	GAR1	52	98.131	Ailuropoda_melanoleuca
ENSHGLG00000000493	GAR1	72	98.182	ENSAOCG00000020947	gar1	60	91.473	Amphiprion_ocellaris
ENSHGLG00000000493	GAR1	72	98.182	ENSAPEG00000001676	gar1	60	91.473	Amphiprion_percula
ENSHGLG00000000493	GAR1	72	98.182	ENSATEG00000003733	gar1	50	95.327	Anabas_testudineus
ENSHGLG00000000493	GAR1	72	92.727	ENSAPLG00000010926	GAR1	59	90.566	Anas_platyrhynchos
ENSHGLG00000000493	GAR1	72	94.545	ENSACAG00000010031	GAR1	50	92.453	Anolis_carolinensis
ENSHGLG00000000493	GAR1	72	96.364	ENSAMXG00000015752	gar1	82	85.926	Astyanax_mexicanus
ENSHGLG00000000493	GAR1	72	100.000	ENSBTAG00000000748	GAR1	51	98.131	Bos_taurus
ENSHGLG00000000493	GAR1	62	57.447	WBGene00022046	Y66H1A.4	54	54.478	Caenorhabditis_elegans
ENSHGLG00000000493	GAR1	96	98.630	ENSCAFG00020015566	GAR1	56	99.065	Canis_lupus_dingo
ENSHGLG00000000493	GAR1	72	100.000	ENSCHIG00000016026	-	51	98.131	Capra_hircus
ENSHGLG00000000493	GAR1	54	97.561	ENSCHIG00000011049	-	54	85.047	Capra_hircus
ENSHGLG00000000493	GAR1	72	89.091	ENSTSYG00000026632	-	55	89.720	Carlito_syrichta
ENSHGLG00000000493	GAR1	72	100.000	ENSTSYG00000013668	-	50	98.131	Carlito_syrichta
ENSHGLG00000000493	GAR1	72	98.182	ENSCAPG00000014977	-	69	98.182	Cavia_aperea
ENSHGLG00000000493	GAR1	99	97.333	ENSCATG00000021854	GAR1	54	98.131	Cercocebus_atys
ENSHGLG00000000493	GAR1	72	98.182	ENSCLAG00000005335	GAR1	69	98.182	Chinchilla_lanigera
ENSHGLG00000000493	GAR1	99	97.333	ENSCSAG00000003922	GAR1	54	98.131	Chlorocebus_sabaeus
ENSHGLG00000000493	GAR1	99	97.333	ENSCHOG00000007484	-	51	98.276	Choloepus_hoffmanni
ENSHGLG00000000493	GAR1	72	96.364	ENSCPBG00000004310	GAR1	60	92.437	Chrysemys_picta_bellii
ENSHGLG00000000493	GAR1	63	70.833	ENSCSAVG00000006355	-	75	57.823	Ciona_savignyi
ENSHGLG00000000493	GAR1	72	98.182	ENSCGRG00000010165	-	72	97.826	Cricetulus_griseus_crigri
ENSHGLG00000000493	GAR1	92	88.571	ENSCVAG00000002103	gar1	51	94.393	Cyprinodon_variegatus
ENSHGLG00000000493	GAR1	72	96.364	ENSDARG00000076526	gar1	52	88.889	Danio_rerio
ENSHGLG00000000493	GAR1	72	100.000	ENSDNOG00000037632	GAR1	54	97.196	Dasypus_novemcinctus
ENSHGLG00000000493	GAR1	75	57.895	FBgn0011824	CG4038	70	55.652	Drosophila_melanogaster
ENSHGLG00000000493	GAR1	96	98.630	ENSEASG00005004658	GAR1	50	98.131	Equus_asinus_asinus
ENSHGLG00000000493	GAR1	96	98.630	ENSECAG00000013624	GAR1	54	99.065	Equus_caballus
ENSHGLG00000000493	GAR1	96	98.630	ENSFCAG00000040791	-	51	99.065	Felis_catus
ENSHGLG00000000493	GAR1	67	52.941	ENSFCAG00000025841	-	57	63.025	Felis_catus
ENSHGLG00000000493	GAR1	100	95.000	ENSFDAG00000006333	-	100	95.000	Fukomys_damarensis
ENSHGLG00000000493	GAR1	72	94.545	ENSFHEG00000008068	gar1	50	93.458	Fundulus_heteroclitus
ENSHGLG00000000493	GAR1	70	98.113	ENSGAGG00000004393	GAR1	61	91.597	Gopherus_agassizii
ENSHGLG00000000493	GAR1	72	76.364	ENSGGOG00000036205	-	53	79.439	Gorilla_gorilla
ENSHGLG00000000493	GAR1	100	100.000	ENSHGLG00100016873	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000000493	GAR1	72	96.364	ENSIPUG00000003194	gar1	72	78.289	Ictalurus_punctatus
ENSHGLG00000000493	GAR1	72	96.364	ENSSTOG00000005577	GAR1	100	94.805	Ictidomys_tridecemlineatus
ENSHGLG00000000493	GAR1	72	96.364	ENSKMAG00000010402	gar1	51	93.458	Kryptolebias_marmoratus
ENSHGLG00000000493	GAR1	89	79.054	ENSLBEG00000015647	gar1	73	76.282	Labrus_bergylta
ENSHGLG00000000493	GAR1	72	92.727	ENSLACG00000003306	GAR1	64	88.679	Latimeria_chalumnae
ENSHGLG00000000493	GAR1	72	98.182	ENSLOCG00000011711	GAR1	67	88.235	Lepisosteus_oculatus
ENSHGLG00000000493	GAR1	74	80.357	ENSMFAG00000003572	-	52	82.243	Macaca_fascicularis
ENSHGLG00000000493	GAR1	72	92.727	ENSMGAG00000011058	GAR1	66	79.333	Meleagris_gallopavo
ENSHGLG00000000493	GAR1	72	98.182	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSHGLG00000000493	GAR1	72	100.000	ENSMOCG00000001340	Gar1	99	93.590	Microtus_ochrogaster
ENSHGLG00000000493	GAR1	72	98.182	ENSMMOG00000004156	gar1	52	96.262	Mola_mola
ENSHGLG00000000493	GAR1	72	96.364	ENSMALG00000009672	gar1	50	93.458	Monopterus_albus
ENSHGLG00000000493	GAR1	72	100.000	MGP_CAROLIEiJ_G0025627	Gar1	99	93.590	Mus_caroli
ENSHGLG00000000493	GAR1	72	100.000	ENSMUSG00000028010	Gar1	99	93.590	Mus_musculus
ENSHGLG00000000493	GAR1	72	100.000	MGP_PahariEiJ_G0027076	Gar1	99	93.590	Mus_pahari
ENSHGLG00000000493	GAR1	72	100.000	MGP_SPRETEiJ_G0026580	Gar1	99	93.590	Mus_spretus
ENSHGLG00000000493	GAR1	96	98.630	ENSMPUG00000008615	GAR1	51	99.065	Mustela_putorius_furo
ENSHGLG00000000493	GAR1	93	97.183	ENSNGAG00000008268	Gar1	100	96.104	Nannospalax_galili
ENSHGLG00000000493	GAR1	74	78.571	ENSNLEG00000034282	-	54	82.243	Nomascus_leucogenys
ENSHGLG00000000493	GAR1	99	97.333	ENSNLEG00000016578	GAR1	50	98.131	Nomascus_leucogenys
ENSHGLG00000000493	GAR1	72	100.000	ENSODEG00000011083	GAR1	99	92.188	Octodon_degus
ENSHGLG00000000493	GAR1	72	100.000	ENSOCUG00000003901	GAR1	100	92.558	Oryctolagus_cuniculus
ENSHGLG00000000493	GAR1	72	98.182	ENSOGAG00000004693	GAR1	100	93.925	Otolemur_garnettii
ENSHGLG00000000493	GAR1	72	100.000	ENSOARG00000004910	GAR1	51	98.131	Ovis_aries
ENSHGLG00000000493	GAR1	99	97.333	ENSPPAG00000014081	GAR1	54	98.131	Pan_paniscus
ENSHGLG00000000493	GAR1	96	98.630	ENSPPRG00000023697	GAR1	51	99.065	Panthera_pardus
ENSHGLG00000000493	GAR1	96	98.630	ENSPTIG00000021565	GAR1	51	99.065	Panthera_tigris_altaica
ENSHGLG00000000493	GAR1	72	80.000	ENSPTRG00000049340	-	66	72.993	Pan_troglodytes
ENSHGLG00000000493	GAR1	99	97.333	ENSPTRG00000016364	GAR1	54	98.131	Pan_troglodytes
ENSHGLG00000000493	GAR1	71	98.148	ENSPKIG00000018991	gar1	61	88.321	Paramormyrops_kingsleyae
ENSHGLG00000000493	GAR1	72	96.364	ENSPSIG00000002970	GAR1	77	77.976	Pelodiscus_sinensis
ENSHGLG00000000493	GAR1	72	98.182	ENSPMGG00000022004	gar1	56	86.719	Periophthalmus_magnuspinnatus
ENSHGLG00000000493	GAR1	72	98.182	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSHGLG00000000493	GAR1	72	96.364	ENSPFOG00000024155	gar1	51	93.458	Poecilia_formosa
ENSHGLG00000000493	GAR1	72	96.364	ENSPLAG00000015056	gar1	51	93.458	Poecilia_latipinna
ENSHGLG00000000493	GAR1	72	96.364	ENSPMEG00000009320	gar1	51	94.393	Poecilia_mexicana
ENSHGLG00000000493	GAR1	99	97.333	ENSPCOG00000027049	GAR1	55	98.131	Propithecus_coquereli
ENSHGLG00000000493	GAR1	74	100.000	ENSRNOG00000061146	Gar1	63	98.131	Rattus_norvegicus
ENSHGLG00000000493	GAR1	74	76.786	ENSRBIG00000042411	-	52	79.439	Rhinopithecus_bieti
ENSHGLG00000000493	GAR1	99	97.333	ENSRBIG00000019547	GAR1	54	98.131	Rhinopithecus_bieti
ENSHGLG00000000493	GAR1	99	97.333	ENSRROG00000028454	GAR1	54	98.131	Rhinopithecus_roxellana
ENSHGLG00000000493	GAR1	74	76.786	ENSRROG00000044348	-	51	79.439	Rhinopithecus_roxellana
ENSHGLG00000000493	GAR1	99	97.333	ENSSBOG00000024785	GAR1	50	98.131	Saimiri_boliviensis_boliviensis
ENSHGLG00000000493	GAR1	72	96.364	ENSSFOG00015013198	gar1	62	86.331	Scleropages_formosus
ENSHGLG00000000493	GAR1	72	98.182	ENSSLDG00000023264	gar1	50	94.393	Seriola_lalandi_dorsalis
ENSHGLG00000000493	GAR1	72	96.364	ENSSPUG00000008707	GAR1	59	94.340	Sphenodon_punctatus
ENSHGLG00000000493	GAR1	72	98.182	ENSSPAG00000005974	gar1	53	93.388	Stegastes_partitus
ENSHGLG00000000493	GAR1	96	98.630	ENSSSCG00000009137	GAR1	99	93.237	Sus_scrofa
ENSHGLG00000000493	GAR1	72	94.545	ENSTGUG00000004185	GAR1	67	90.909	Taeniopygia_guttata
ENSHGLG00000000493	GAR1	72	90.909	ENSTRUG00000020580	gar1	51	91.589	Takifugu_rubripes
ENSHGLG00000000493	GAR1	68	96.154	ENSTNIG00000013023	gar1	61	94.393	Tetraodon_nigroviridis
ENSHGLG00000000493	GAR1	96	98.630	ENSUAMG00000005652	GAR1	56	99.065	Ursus_americanus
ENSHGLG00000000493	GAR1	96	98.630	ENSUMAG00000000776	GAR1	52	99.065	Ursus_maritimus
ENSHGLG00000000493	GAR1	96	98.630	ENSVVUG00000017612	GAR1	55	99.065	Vulpes_vulpes