EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000000600 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 1838 bases
Position: chrAHKG01112344.1:5-1842
Accession: 101700593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000000701	RRM_1	PF00076.22	1.5e-25	1	2
ENSHGLP00000000701	RRM_1	PF00076.22	1.5e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000000741	-	892	XM_004875612	ENSHGLP00000000701	215 (aa)	XP_004875669	-

Gene Model

Click here to download ENSHGLG00000000600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000000600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000000600	-	80	36.464	ENSHGLG00000007701	-	57	35.556
ENSHGLG00000000600	-	74	71.698	ENSHGLG00000014372	SRSF9	68	71.698
ENSHGLG00000000600	-	92	60.101	ENSHGLG00000003582	-	72	66.667
ENSHGLG00000000600	-	81	41.579	ENSHGLG00000007348	SRSF6	52	40.526
ENSHGLG00000000600	-	65	47.619	ENSHGLG00000010147	SRSF5	52	46.939
ENSHGLG00000000600	-	100	100.000	ENSHGLG00000000669	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000000600	-	100	100.000	ENSG00000136450	SRSF1	99	100.000	Homo_sapiens
ENSHGLG00000000600	-	76	91.176	ENSAPOG00000008542	-	68	89.412	Acanthochromis_polyacanthus
ENSHGLG00000000600	-	76	91.463	ENSAPOG00000002748	-	66	88.415	Acanthochromis_polyacanthus
ENSHGLG00000000600	-	100	96.744	ENSAMEG00000002635	SRSF1	86	96.744	Ailuropoda_melanoleuca
ENSHGLG00000000600	-	76	91.463	ENSACIG00000008091	srsf1a	70	89.024	Amphilophus_citrinellus
ENSHGLG00000000600	-	76	91.176	ENSAOCG00000000337	-	69	89.412	Amphiprion_ocellaris
ENSHGLG00000000600	-	76	92.073	ENSAOCG00000010671	-	70	89.634	Amphiprion_ocellaris
ENSHGLG00000000600	-	76	91.176	ENSAPEG00000023352	-	67	89.412	Amphiprion_percula
ENSHGLG00000000600	-	76	92.073	ENSAPEG00000009915	-	70	89.634	Amphiprion_percula
ENSHGLG00000000600	-	79	87.647	ENSATEG00000021567	-	67	89.024	Anabas_testudineus
ENSHGLG00000000600	-	76	92.073	ENSATEG00000022403	-	66	89.634	Anabas_testudineus
ENSHGLG00000000600	-	100	98.140	ENSACAG00000005542	-	87	98.140	Anolis_carolinensis
ENSHGLG00000000600	-	78	69.461	ENSANAG00000025417	-	59	67.073	Aotus_nancymaae
ENSHGLG00000000600	-	100	99.070	ENSANAG00000020583	-	85	99.070	Aotus_nancymaae
ENSHGLG00000000600	-	62	78.065	ENSAMXG00000024373	-	72	76.282	Astyanax_mexicanus
ENSHGLG00000000600	-	95	91.388	ENSAMXG00000035996	srsf1a	67	92.899	Astyanax_mexicanus
ENSHGLG00000000600	-	100	100.000	ENSBTAG00000014766	SRSF1	87	100.000	Bos_taurus
ENSHGLG00000000600	-	76	91.463	ENSCJAG00000008111	-	73	91.463	Callithrix_jacchus
ENSHGLG00000000600	-	100	99.070	ENSCJAG00000041713	-	85	99.070	Callithrix_jacchus
ENSHGLG00000000600	-	100	99.070	ENSCAFG00000017430	SRSF1	85	99.070	Canis_familiaris
ENSHGLG00000000600	-	100	99.070	ENSCAFG00020025632	-	85	99.070	Canis_lupus_dingo
ENSHGLG00000000600	-	100	100.000	ENSCHIG00000010787	SRSF1	87	100.000	Capra_hircus
ENSHGLG00000000600	-	100	99.070	ENSTSYG00000013899	-	85	99.070	Carlito_syrichta
ENSHGLG00000000600	-	100	100.000	ENSCPOG00000032681	-	87	100.000	Cavia_porcellus
ENSHGLG00000000600	-	100	100.000	ENSCCAG00000029484	-	87	100.000	Cebus_capucinus
ENSHGLG00000000600	-	100	99.070	ENSCATG00000042294	-	88	98.693	Cercocebus_atys
ENSHGLG00000000600	-	100	100.000	ENSCLAG00000014707	-	87	100.000	Chinchilla_lanigera
ENSHGLG00000000600	-	100	98.140	ENSCSAG00000005642	-	85	98.140	Chlorocebus_sabaeus
ENSHGLG00000000600	-	100	100.000	ENSCHOG00000001899	SRSF1	87	100.000	Choloepus_hoffmanni
ENSHGLG00000000600	-	100	98.605	ENSCPBG00000009851	-	87	98.605	Chrysemys_picta_bellii
ENSHGLG00000000600	-	100	99.070	ENSCANG00000029726	-	85	99.070	Colobus_angolensis_palliatus
ENSHGLG00000000600	-	100	99.070	ENSCGRG00001000670	Srsf1	85	99.070	Cricetulus_griseus_chok1gshd
ENSHGLG00000000600	-	100	100.000	ENSCGRG00000005590	Srsf1	87	100.000	Cricetulus_griseus_crigri
ENSHGLG00000000600	-	76	82.123	ENSCSEG00000009973	-	68	81.006	Cynoglossus_semilaevis
ENSHGLG00000000600	-	76	91.018	ENSCSEG00000014272	-	67	91.018	Cynoglossus_semilaevis
ENSHGLG00000000600	-	76	91.515	ENSCVAG00000005458	-	76	90.196	Cyprinodon_variegatus
ENSHGLG00000000600	-	76	92.073	ENSCVAG00000018617	-	66	89.634	Cyprinodon_variegatus
ENSHGLG00000000600	-	76	89.080	ENSDARG00000057691	srsf1a	83	89.441	Danio_rerio
ENSHGLG00000000600	-	100	96.744	ENSDARG00000017843	srsf1b	87	96.744	Danio_rerio
ENSHGLG00000000600	-	100	99.070	ENSDNOG00000011737	-	85	99.070	Dasypus_novemcinctus
ENSHGLG00000000600	-	100	100.000	ENSDORG00000015082	Srsf1	87	100.000	Dipodomys_ordii
ENSHGLG00000000600	-	70	98.675	ENSETEG00000005349	-	52	98.675	Echinops_telfairi
ENSHGLG00000000600	-	100	99.070	ENSEASG00005002922	-	85	99.070	Equus_asinus_asinus
ENSHGLG00000000600	-	100	100.000	ENSECAG00000016654	SRSF1	87	100.000	Equus_caballus
ENSHGLG00000000600	-	70	100.000	ENSEEUG00000009255	-	52	100.000	Erinaceus_europaeus
ENSHGLG00000000600	-	76	93.293	ENSELUG00000021646	srsf1a	65	89.024	Esox_lucius
ENSHGLG00000000600	-	100	99.070	ENSFCAG00000002250	-	85	99.070	Felis_catus
ENSHGLG00000000600	-	99	78.873	ENSFALG00000005062	-	84	78.873	Ficedula_albicollis
ENSHGLG00000000600	-	100	100.000	ENSFDAG00000010646	-	87	100.000	Fukomys_damarensis
ENSHGLG00000000600	-	76	92.073	ENSFHEG00000003174	srsf1a	70	89.634	Fundulus_heteroclitus
ENSHGLG00000000600	-	93	85.427	ENSGMOG00000014787	-	68	85.366	Gadus_morhua
ENSHGLG00000000600	-	100	98.605	ENSGALG00000005525	SRSF1	87	98.605	Gallus_gallus
ENSHGLG00000000600	-	76	86.585	ENSGACG00000020621	srsf1b	66	84.146	Gasterosteus_aculeatus
ENSHGLG00000000600	-	100	97.674	ENSGAGG00000022965	-	85	97.674	Gopherus_agassizii
ENSHGLG00000000600	-	100	99.070	ENSGGOG00000004386	SRSF1	88	98.693	Gorilla_gorilla
ENSHGLG00000000600	-	76	91.463	ENSHBUG00000016788	srsf1a	68	89.024	Haplochromis_burtoni
ENSHGLG00000000600	-	100	100.000	ENSHGLG00100016906	-	87	100.000	Heterocephalus_glaber_male
ENSHGLG00000000600	-	76	86.310	ENSHCOG00000018918	srsf1a	66	86.905	Hippocampus_comes
ENSHGLG00000000600	-	100	96.279	ENSIPUG00000008750	srsf1b	87	96.279	Ictalurus_punctatus
ENSHGLG00000000600	-	95	90.952	ENSIPUG00000017039	srsf1a	67	93.529	Ictalurus_punctatus
ENSHGLG00000000600	-	100	100.000	ENSSTOG00000000243	-	87	100.000	Ictidomys_tridecemlineatus
ENSHGLG00000000600	-	100	100.000	ENSJJAG00000000102	-	87	100.000	Jaculus_jaculus
ENSHGLG00000000600	-	76	92.073	ENSKMAG00000019232	srsf1a	66	87.805	Kryptolebias_marmoratus
ENSHGLG00000000600	-	76	87.425	ENSLBEG00000015294	-	67	88.623	Labrus_bergylta
ENSHGLG00000000600	-	76	90.854	ENSLBEG00000020864	-	70	88.415	Labrus_bergylta
ENSHGLG00000000600	-	76	93.902	ENSLACG00000014160	srsf1a	61	92.073	Latimeria_chalumnae
ENSHGLG00000000600	-	100	96.744	ENSLOCG00000005994	srsf1a	87	96.744	Lepisosteus_oculatus
ENSHGLG00000000600	-	100	100.000	ENSLAFG00000025743	SRSF1	87	100.000	Loxodonta_africana
ENSHGLG00000000600	-	100	100.000	ENSMFAG00000040003	-	87	100.000	Macaca_fascicularis
ENSHGLG00000000600	-	100	95.814	ENSMMUG00000003260	-	85	95.814	Macaca_mulatta
ENSHGLG00000000600	-	100	99.070	ENSMMUG00000004725	SRSF1	85	99.070	Macaca_mulatta
ENSHGLG00000000600	-	100	99.070	ENSMNEG00000027680	-	88	98.693	Macaca_nemestrina
ENSHGLG00000000600	-	100	95.349	ENSMNEG00000015983	-	88	96.732	Macaca_nemestrina
ENSHGLG00000000600	-	100	100.000	ENSMLEG00000040509	SRSF1	87	100.000	Mandrillus_leucophaeus
ENSHGLG00000000600	-	100	91.628	ENSMLEG00000015243	-	64	90.854	Mandrillus_leucophaeus
ENSHGLG00000000600	-	76	92.073	ENSMAMG00000018454	-	66	89.634	Mastacembelus_armatus
ENSHGLG00000000600	-	76	91.463	ENSMAMG00000019687	-	66	88.415	Mastacembelus_armatus
ENSHGLG00000000600	-	76	95.122	ENSMAMG00000019691	-	68	91.463	Mastacembelus_armatus
ENSHGLG00000000600	-	100	100.000	ENSMAUG00000021845	Srsf1	87	100.000	Mesocricetus_auratus
ENSHGLG00000000600	-	100	99.070	ENSMICG00000013639	-	88	98.693	Microcebus_murinus
ENSHGLG00000000600	-	100	100.000	ENSMOCG00000001996	Srsf1	87	100.000	Microtus_ochrogaster
ENSHGLG00000000600	-	76	90.244	ENSMMOG00000014354	srsf1a	70	87.805	Mola_mola
ENSHGLG00000000600	-	70	98.684	ENSMODG00000014781	-	52	98.684	Monodelphis_domestica
ENSHGLG00000000600	-	76	91.463	ENSMALG00000017129	-	64	87.805	Monopterus_albus
ENSHGLG00000000600	-	80	75.439	ENSMALG00000007763	-	64	77.439	Monopterus_albus
ENSHGLG00000000600	-	100	100.000	MGP_CAROLIEiJ_G0016943	Srsf1	89	100.000	Mus_caroli
ENSHGLG00000000600	-	100	100.000	ENSMUSG00000018379	Srsf1	88	100.000	Mus_musculus
ENSHGLG00000000600	-	100	100.000	MGP_PahariEiJ_G0018074	Srsf1	89	100.000	Mus_pahari
ENSHGLG00000000600	-	100	100.000	MGP_SPRETEiJ_G0017790	Srsf1	89	100.000	Mus_spretus
ENSHGLG00000000600	-	100	100.000	ENSMPUG00000015369	SRSF1	87	100.000	Mustela_putorius_furo
ENSHGLG00000000600	-	100	100.000	ENSMLUG00000011040	SRSF1	87	100.000	Myotis_lucifugus
ENSHGLG00000000600	-	79	90.000	ENSMLUG00000023995	-	65	88.415	Myotis_lucifugus
ENSHGLG00000000600	-	100	100.000	ENSNGAG00000011395	Srsf1	87	100.000	Nannospalax_galili
ENSHGLG00000000600	-	100	80.000	ENSNBRG00000008041	srsf1b	66	81.098	Neolamprologus_brichardi
ENSHGLG00000000600	-	100	99.070	ENSNLEG00000008088	-	88	98.693	Nomascus_leucogenys
ENSHGLG00000000600	-	85	100.000	ENSOPRG00000001234	-	100	100.000	Ochotona_princeps
ENSHGLG00000000600	-	100	100.000	ENSODEG00000011481	-	87	100.000	Octodon_degus
ENSHGLG00000000600	-	95	90.196	ENSONIG00000004860	-	67	90.244	Oreochromis_niloticus
ENSHGLG00000000600	-	76	91.463	ENSONIG00000013160	-	65	89.024	Oreochromis_niloticus
ENSHGLG00000000600	-	100	70.320	ENSOCUG00000010894	-	64	72.222	Oryctolagus_cuniculus
ENSHGLG00000000600	-	76	92.073	ENSORLG00000004580	srsf1a	66	89.634	Oryzias_latipes
ENSHGLG00000000600	-	76	92.073	ENSORLG00020009456	srsf1a	70	89.634	Oryzias_latipes_hni
ENSHGLG00000000600	-	76	92.073	ENSORLG00015014384	srsf1a	70	89.634	Oryzias_latipes_hsok
ENSHGLG00000000600	-	76	92.073	ENSOMEG00000004106	srsf1a	66	89.634	Oryzias_melastigma
ENSHGLG00000000600	-	100	100.000	ENSOGAG00000025950	-	87	100.000	Otolemur_garnettii
ENSHGLG00000000600	-	100	94.419	ENSOARG00000008323	SRSF1	86	94.419	Ovis_aries
ENSHGLG00000000600	-	100	100.000	ENSPPAG00000043403	-	87	100.000	Pan_paniscus
ENSHGLG00000000600	-	100	100.000	ENSPPRG00000004238	-	87	100.000	Panthera_pardus
ENSHGLG00000000600	-	100	99.070	ENSPTRG00000049077	SRSF1	88	98.693	Pan_troglodytes
ENSHGLG00000000600	-	100	99.070	ENSPANG00000022305	-	88	98.693	Papio_anubis
ENSHGLG00000000600	-	100	73.023	ENSPANG00000030275	-	76	96.899	Papio_anubis
ENSHGLG00000000600	-	100	95.349	ENSPKIG00000007204	srsf1a	87	95.349	Paramormyrops_kingsleyae
ENSHGLG00000000600	-	100	95.814	ENSPKIG00000012857	srsf1b	87	95.814	Paramormyrops_kingsleyae
ENSHGLG00000000600	-	76	89.157	ENSPSIG00000009000	-	78	97.917	Pelodiscus_sinensis
ENSHGLG00000000600	-	96	87.379	ENSPMGG00000005467	-	68	85.366	Periophthalmus_magnuspinnatus
ENSHGLG00000000600	-	76	88.757	ENSPMGG00000013112	-	70	91.124	Periophthalmus_magnuspinnatus
ENSHGLG00000000600	-	100	100.000	ENSPEMG00000021416	Srsf1	87	100.000	Peromyscus_maniculatus_bairdii
ENSHGLG00000000600	-	100	99.074	ENSPCIG00000006076	-	87	99.074	Phascolarctos_cinereus
ENSHGLG00000000600	-	78	91.667	ENSPFOG00000018325	-	59	91.463	Poecilia_formosa
ENSHGLG00000000600	-	78	91.667	ENSPLAG00000008416	srsf1b	67	90.244	Poecilia_latipinna
ENSHGLG00000000600	-	78	91.667	ENSPMEG00000002388	-	67	90.244	Poecilia_mexicana
ENSHGLG00000000600	-	76	92.073	ENSPREG00000009667	srsf1a	66	89.634	Poecilia_reticulata
ENSHGLG00000000600	-	100	100.000	ENSPPYG00000008240	SRSF1	87	100.000	Pongo_abelii
ENSHGLG00000000600	-	100	100.000	ENSPCAG00000005199	SRSF1	87	100.000	Procavia_capensis
ENSHGLG00000000600	-	100	100.000	ENSPCOG00000023654	-	87	100.000	Propithecus_coquereli
ENSHGLG00000000600	-	77	73.964	ENSPCOG00000025736	-	78	73.620	Propithecus_coquereli
ENSHGLG00000000600	-	71	100.000	ENSPVAG00000000519	-	62	100.000	Pteropus_vampyrus
ENSHGLG00000000600	-	95	93.137	ENSPNAG00000022241	srsf1a	66	89.634	Pygocentrus_nattereri
ENSHGLG00000000600	-	100	93.953	ENSPNAG00000014601	srsf1b	86	93.953	Pygocentrus_nattereri
ENSHGLG00000000600	-	100	100.000	ENSRNOG00000050323	Srsf1	87	100.000	Rattus_norvegicus
ENSHGLG00000000600	-	100	99.070	ENSRBIG00000034445	-	88	98.693	Rhinopithecus_bieti
ENSHGLG00000000600	-	100	100.000	ENSRROG00000041506	-	87	100.000	Rhinopithecus_roxellana
ENSHGLG00000000600	-	100	100.000	ENSSBOG00000025377	-	87	100.000	Saimiri_boliviensis_boliviensis
ENSHGLG00000000600	-	100	99.074	ENSSHAG00000002552	-	87	99.074	Sarcophilus_harrisii
ENSHGLG00000000600	-	100	96.279	ENSSFOG00015004800	srsf1a	86	96.279	Scleropages_formosus
ENSHGLG00000000600	-	76	90.244	ENSSMAG00000007018	-	66	87.195	Scophthalmus_maximus
ENSHGLG00000000600	-	93	87.440	ENSSMAG00000009719	-	67	86.550	Scophthalmus_maximus
ENSHGLG00000000600	-	100	76.606	ENSSDUG00000003929	-	69	82.635	Seriola_dumerili
ENSHGLG00000000600	-	76	90.854	ENSSDUG00000011303	-	70	88.415	Seriola_dumerili
ENSHGLG00000000600	-	76	83.030	ENSSLDG00000016868	-	64	83.030	Seriola_lalandi_dorsalis
ENSHGLG00000000600	-	94	76.355	ENSSLDG00000016895	-	64	84.416	Seriola_lalandi_dorsalis
ENSHGLG00000000600	-	76	90.854	ENSSLDG00000010543	-	66	88.415	Seriola_lalandi_dorsalis
ENSHGLG00000000600	-	70	100.000	ENSSARG00000010949	-	52	100.000	Sorex_araneus
ENSHGLG00000000600	-	100	97.674	ENSSPUG00000000804	-	85	97.674	Sphenodon_punctatus
ENSHGLG00000000600	-	76	88.068	ENSSPAG00000014152	-	68	86.932	Stegastes_partitus
ENSHGLG00000000600	-	76	92.683	ENSSPAG00000022562	-	66	90.244	Stegastes_partitus
ENSHGLG00000000600	-	100	100.000	ENSSSCG00000017626	-	87	100.000	Sus_scrofa
ENSHGLG00000000600	-	86	98.370	ENSTGUG00000008416	-	100	98.370	Taeniopygia_guttata
ENSHGLG00000000600	-	76	90.854	ENSTRUG00000003691	srsf1a	66	88.415	Takifugu_rubripes
ENSHGLG00000000600	-	76	90.854	ENSTNIG00000016223	srsf1a	66	88.415	Tetraodon_nigroviridis
ENSHGLG00000000600	-	70	99.333	ENSTBEG00000015378	-	51	99.333	Tupaia_belangeri
ENSHGLG00000000600	-	85	100.000	ENSTTRG00000007310	SRSF1	100	100.000	Tursiops_truncatus
ENSHGLG00000000600	-	100	100.000	ENSUAMG00000009858	SRSF1	87	100.000	Ursus_americanus
ENSHGLG00000000600	-	100	99.070	ENSUMAG00000000455	-	85	99.070	Ursus_maritimus
ENSHGLG00000000600	-	100	99.535	ENSVPAG00000010094	SRSF1	87	99.535	Vicugna_pacos
ENSHGLG00000000600	-	100	99.070	ENSVVUG00000011882	-	85	99.070	Vulpes_vulpes
ENSHGLG00000000600	-	100	95.349	ENSXETG00000008954	srsf1	88	90.171	Xenopus_tropicalis
ENSHGLG00000000600	-	76	92.073	ENSXMAG00000011766	srsf1a	66	89.634	Xiphophorus_maculatus