EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000000650 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cold shock domain-containing protein E1-like
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 2503 bases
Position: chrJH602195.1:1108113-1110615
Accession: 101704820
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000000779	CSD	PF00313.22	2.8e-62	1	4
ENSHGLP00000000779	CSD	PF00313.22	2.8e-62	2	4
ENSHGLP00000000779	CSD	PF00313.22	2.8e-62	3	4
ENSHGLP00000000779	CSD	PF00313.22	2.8e-62	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000000819	-	2073	XM_013067880	ENSHGLP00000000779	690 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000000650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000000650's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000000650	-	99	80.795	ENSHGLG00000009620	-	99	80.795
ENSHGLG00000000650	-	99	74.902	ENSHGLG00000003829	-	99	74.902
ENSHGLG00000000650	-	98	74.777	ENSHGLG00000010039	-	99	74.777
ENSHGLG00000000650	-	99	71.703	ENSHGLG00000007471	-	98	71.703
ENSHGLG00000000650	-	99	73.879	ENSHGLG00000019549	-	99	73.879
ENSHGLG00000000650	-	99	71.644	ENSHGLG00000008555	-	99	71.644

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000000650	-	99	80.301	ENSG00000009307	CSDE1	97	96.212	Homo_sapiens
ENSHGLG00000000650	-	99	60.880	ENSAPOG00000015538	csde1	99	60.584	Acanthochromis_polyacanthus
ENSHGLG00000000650	-	99	76.005	ENSAMEG00000017129	CSDE1	94	75.879	Ailuropoda_melanoleuca
ENSHGLG00000000650	-	63	62.338	ENSACIG00000015175	csde1	99	62.338	Amphilophus_citrinellus
ENSHGLG00000000650	-	99	61.002	ENSAOCG00000011510	csde1	99	59.950	Amphiprion_ocellaris
ENSHGLG00000000650	-	99	62.453	ENSAPEG00000007194	csde1	99	61.002	Amphiprion_percula
ENSHGLG00000000650	-	99	59.324	ENSATEG00000003864	csde1	99	59.324	Anabas_testudineus
ENSHGLG00000000650	-	99	68.758	ENSAPLG00000008797	CSDE1	99	68.758	Anas_platyrhynchos
ENSHGLG00000000650	-	99	74.153	ENSACAG00000003120	CSDE1	99	74.153	Anolis_carolinensis
ENSHGLG00000000650	-	99	79.925	ENSANAG00000024665	CSDE1	94	79.925	Aotus_nancymaae
ENSHGLG00000000650	-	99	62.328	ENSACLG00000013296	csde1	99	62.328	Astatotilapia_calliptera
ENSHGLG00000000650	-	99	59.500	ENSAMXG00000007436	csde1	99	59.500	Astyanax_mexicanus
ENSHGLG00000000650	-	99	79.799	ENSBTAG00000000678	CSDE1	99	75.910	Bos_taurus
ENSHGLG00000000650	-	99	80.050	ENSCJAG00000012565	CSDE1	94	80.050	Callithrix_jacchus
ENSHGLG00000000650	-	98	76.117	ENSCAFG00000009618	CSDE1	94	76.117	Canis_familiaris
ENSHGLG00000000650	-	99	76.286	ENSCAFG00020000481	CSDE1	99	76.286	Canis_lupus_dingo
ENSHGLG00000000650	-	99	79.799	ENSCHIG00000017250	CSDE1	99	75.910	Capra_hircus
ENSHGLG00000000650	-	99	80.050	ENSTSYG00000003747	CSDE1	99	80.050	Carlito_syrichta
ENSHGLG00000000650	-	99	65.494	ENSCAPG00000015128	CSDE1	99	65.494	Cavia_aperea
ENSHGLG00000000650	-	99	75.659	ENSCPOG00000040388	CSDE1	99	75.659	Cavia_porcellus
ENSHGLG00000000650	-	99	80.050	ENSCCAG00000036794	CSDE1	99	80.050	Cebus_capucinus
ENSHGLG00000000650	-	96	60.771	ENSCCAG00000030878	-	90	60.771	Cebus_capucinus
ENSHGLG00000000650	-	95	63.221	ENSCCAG00000033677	-	99	63.221	Cebus_capucinus
ENSHGLG00000000650	-	99	80.301	ENSCATG00000036962	CSDE1	98	79.286	Cercocebus_atys
ENSHGLG00000000650	-	99	80.552	ENSCLAG00000006618	CSDE1	99	80.552	Chinchilla_lanigera
ENSHGLG00000000650	-	99	80.301	ENSCSAG00000001658	CSDE1	94	80.301	Chlorocebus_sabaeus
ENSHGLG00000000650	-	99	86.408	ENSCHOG00000000918	CSDE1	94	86.408	Choloepus_hoffmanni
ENSHGLG00000000650	-	99	74.404	ENSCPBG00000016547	CSDE1	99	74.404	Chrysemys_picta_bellii
ENSHGLG00000000650	-	97	36.183	ENSCING00000014465	-	94	36.183	Ciona_intestinalis
ENSHGLG00000000650	-	95	43.005	ENSCSAVG00000008100	-	99	37.176	Ciona_savignyi
ENSHGLG00000000650	-	99	61.633	ENSCANG00000031069	-	93	75.472	Colobus_angolensis_palliatus
ENSHGLG00000000650	-	99	80.301	ENSCANG00000035096	CSDE1	98	79.286	Colobus_angolensis_palliatus
ENSHGLG00000000650	-	99	65.234	ENSCGRG00001014011	-	99	65.234	Cricetulus_griseus_chok1gshd
ENSHGLG00000000650	-	99	80.176	ENSCGRG00001016833	-	99	80.176	Cricetulus_griseus_chok1gshd
ENSHGLG00000000650	-	97	79.018	ENSCGRG00000002225	-	99	79.018	Cricetulus_griseus_crigri
ENSHGLG00000000650	-	99	65.494	ENSCGRG00000005831	-	99	65.494	Cricetulus_griseus_crigri
ENSHGLG00000000650	-	99	59.732	ENSCSEG00000002620	csde1	99	59.074	Cynoglossus_semilaevis
ENSHGLG00000000650	-	99	61.452	ENSCVAG00000001344	csde1	99	61.146	Cyprinodon_variegatus
ENSHGLG00000000650	-	99	63.079	ENSDARG00000074758	csde1	100	74.286	Danio_rerio
ENSHGLG00000000650	-	64	65.217	ENSDNOG00000034464	-	100	65.217	Dasypus_novemcinctus
ENSHGLG00000000650	-	99	75.940	ENSDNOG00000010287	-	93	75.940	Dasypus_novemcinctus
ENSHGLG00000000650	-	99	79.925	ENSDORG00000011609	Csde1	99	79.925	Dipodomys_ordii
ENSHGLG00000000650	-	96	40.733	FBgn0263352	Unr	82	38.428	Drosophila_melanogaster
ENSHGLG00000000650	-	72	53.650	ENSETEG00000007109	-	99	53.650	Echinops_telfairi
ENSHGLG00000000650	-	92	72.892	ENSETEG00000002491	-	74	72.892	Echinops_telfairi
ENSHGLG00000000650	-	80	66.819	ENSETEG00000006280	-	100	66.819	Echinops_telfairi
ENSHGLG00000000650	-	99	60.127	ENSETEG00000013678	-	99	60.127	Echinops_telfairi
ENSHGLG00000000650	-	99	44.226	ENSEBUG00000008647	csde1	99	42.857	Eptatretus_burgeri
ENSHGLG00000000650	-	99	80.176	ENSEASG00005006284	CSDE1	99	80.176	Equus_asinus_asinus
ENSHGLG00000000650	-	99	80.176	ENSECAG00000020885	CSDE1	99	80.176	Equus_caballus
ENSHGLG00000000650	-	91	87.222	ENSEEUG00000006286	CSDE1	66	87.222	Erinaceus_europaeus
ENSHGLG00000000650	-	99	60.169	ENSELUG00000015507	csde1	99	58.728	Esox_lucius
ENSHGLG00000000650	-	99	80.427	ENSFCAG00000029266	CSDE1	99	76.537	Felis_catus
ENSHGLG00000000650	-	99	74.279	ENSFALG00000003407	CSDE1	99	74.279	Ficedula_albicollis
ENSHGLG00000000650	-	99	80.803	ENSFDAG00000007882	CSDE1	99	80.803	Fukomys_damarensis
ENSHGLG00000000650	-	99	61.702	ENSFHEG00000010799	csde1	99	61.702	Fundulus_heteroclitus
ENSHGLG00000000650	-	99	62.578	ENSGMOG00000012731	csde1	100	62.578	Gadus_morhua
ENSHGLG00000000650	-	99	73.770	ENSGALG00000002139	CSDE1	99	73.770	Gallus_gallus
ENSHGLG00000000650	-	83	56.122	ENSGAFG00000005241	csde1	95	56.122	Gambusia_affinis
ENSHGLG00000000650	-	99	62.578	ENSGACG00000004544	csde1	100	62.578	Gasterosteus_aculeatus
ENSHGLG00000000650	-	99	74.028	ENSGAGG00000017685	CSDE1	99	74.028	Gopherus_agassizii
ENSHGLG00000000650	-	99	80.301	ENSGGOG00000002164	CSDE1	99	76.884	Gorilla_gorilla
ENSHGLG00000000650	-	99	61.893	ENSHBUG00000020315	csde1	99	60.145	Haplochromis_burtoni
ENSHGLG00000000650	-	99	68.766	ENSHGLG00100007287	-	98	68.766	Heterocephalus_glaber_male
ENSHGLG00000000650	-	99	81.054	ENSHGLG00100019438	-	99	81.054	Heterocephalus_glaber_male
ENSHGLG00000000650	-	98	74.554	ENSHGLG00100006910	-	99	74.554	Heterocephalus_glaber_male
ENSHGLG00000000650	-	99	73.009	ENSHGLG00100001846	-	99	73.462	Heterocephalus_glaber_male
ENSHGLG00000000650	-	93	64.706	ENSHGLG00100004195	-	100	64.706	Heterocephalus_glaber_male
ENSHGLG00000000650	-	99	69.804	ENSHGLG00100012072	-	99	69.804	Heterocephalus_glaber_male
ENSHGLG00000000650	-	96	72.581	ENSHGLG00100004833	-	99	72.581	Heterocephalus_glaber_male
ENSHGLG00000000650	-	100	89.417	ENSHGLG00100002245	-	100	89.417	Heterocephalus_glaber_male
ENSHGLG00000000650	-	99	61.827	ENSHCOG00000004158	csde1	99	59.324	Hippocampus_comes
ENSHGLG00000000650	-	99	60.000	ENSIPUG00000000355	csde1	99	60.000	Ictalurus_punctatus
ENSHGLG00000000650	-	83	77.554	ENSSTOG00000032722	-	98	77.554	Ictidomys_tridecemlineatus
ENSHGLG00000000650	-	99	67.812	ENSSTOG00000030994	-	99	67.812	Ictidomys_tridecemlineatus
ENSHGLG00000000650	-	99	79.925	ENSJJAG00000019571	Csde1	99	79.925	Jaculus_jaculus
ENSHGLG00000000650	-	99	61.940	ENSKMAG00000005685	csde1	99	61.586	Kryptolebias_marmoratus
ENSHGLG00000000650	-	99	60.880	ENSLBEG00000014770	csde1	99	59.825	Labrus_bergylta
ENSHGLG00000000650	-	99	64.348	ENSLACG00000018452	CSDE1	94	64.348	Latimeria_chalumnae
ENSHGLG00000000650	-	99	64.912	ENSLOCG00000010413	csde1	94	64.912	Lepisosteus_oculatus
ENSHGLG00000000650	-	99	75.659	ENSLAFG00000007150	CSDE1	96	75.659	Loxodonta_africana
ENSHGLG00000000650	-	99	80.301	ENSMFAG00000003674	CSDE1	98	79.286	Macaca_fascicularis
ENSHGLG00000000650	-	99	80.301	ENSMMUG00000001974	CSDE1	99	76.412	Macaca_mulatta
ENSHGLG00000000650	-	99	80.301	ENSMNEG00000045247	CSDE1	98	79.286	Macaca_nemestrina
ENSHGLG00000000650	-	99	80.050	ENSMLEG00000038673	CSDE1	94	80.050	Mandrillus_leucophaeus
ENSHGLG00000000650	-	99	61.491	ENSMAMG00000008821	csde1	99	60.325	Mastacembelus_armatus
ENSHGLG00000000650	-	99	62.328	ENSMZEG00005021675	csde1	99	59.825	Maylandia_zebra
ENSHGLG00000000650	-	99	73.392	ENSMGAG00000016381	CSDE1	99	73.392	Meleagris_gallopavo
ENSHGLG00000000650	-	99	80.176	ENSMAUG00000014031	Csde1	99	80.176	Mesocricetus_auratus
ENSHGLG00000000650	-	99	79.674	ENSMICG00000002050	CSDE1	99	79.866	Microcebus_murinus
ENSHGLG00000000650	-	99	80.176	ENSMOCG00000018960	Csde1	99	80.176	Microtus_ochrogaster
ENSHGLG00000000650	-	99	59.700	ENSMMOG00000015075	csde1	99	59.700	Mola_mola
ENSHGLG00000000650	-	99	77.164	ENSMODG00000004685	CSDE1	99	77.164	Monodelphis_domestica
ENSHGLG00000000650	-	99	59.825	ENSMALG00000007132	csde1	99	59.825	Monopterus_albus
ENSHGLG00000000650	-	99	79.925	MGP_CAROLIEiJ_G0025444	Csde1	97	94.521	Mus_caroli
ENSHGLG00000000650	-	99	80.050	ENSMUSG00000068823	Csde1	97	94.521	Mus_musculus
ENSHGLG00000000650	-	99	80.301	MGP_PahariEiJ_G0026888	Csde1	97	94.521	Mus_pahari
ENSHGLG00000000650	-	99	80.301	MGP_SPRETEiJ_G0026394	Csde1	97	94.521	Mus_spretus
ENSHGLG00000000650	-	98	80.332	ENSMPUG00000005753	CSDE1	99	80.332	Mustela_putorius_furo
ENSHGLG00000000650	-	99	75.659	ENSMLUG00000005681	CSDE1	94	75.533	Myotis_lucifugus
ENSHGLG00000000650	-	99	80.176	ENSNGAG00000021929	Csde1	99	80.176	Nannospalax_galili
ENSHGLG00000000650	-	96	57.604	ENSNGAG00000012599	-	99	57.604	Nannospalax_galili
ENSHGLG00000000650	-	99	59.825	ENSNBRG00000020808	csde1	99	59.825	Neolamprologus_brichardi
ENSHGLG00000000650	-	99	80.176	ENSNLEG00000004842	CSDE1	94	80.176	Nomascus_leucogenys
ENSHGLG00000000650	-	98	87.379	ENSMEUG00000002677	CSDE1	100	87.379	Notamacropus_eugenii
ENSHGLG00000000650	-	98	88.350	ENSOPRG00000005002	CSDE1	74	88.350	Ochotona_princeps
ENSHGLG00000000650	-	99	80.176	ENSODEG00000007383	-	99	80.176	Octodon_degus
ENSHGLG00000000650	-	88	57.110	ENSODEG00000005979	-	97	57.110	Octodon_degus
ENSHGLG00000000650	-	99	60.880	ENSONIG00000009309	csde1	99	60.880	Oreochromis_niloticus
ENSHGLG00000000650	-	99	64.096	ENSOANG00000003346	-	99	64.096	Ornithorhynchus_anatinus
ENSHGLG00000000650	-	99	79.674	ENSOCUG00000016438	CSDE1	94	79.674	Oryctolagus_cuniculus
ENSHGLG00000000650	-	99	60.391	ENSORLG00000000707	csde1	99	60.391	Oryzias_latipes
ENSHGLG00000000650	-	99	61.952	ENSORLG00020005148	csde1	99	60.513	Oryzias_latipes_hni
ENSHGLG00000000650	-	99	61.827	ENSORLG00015019415	csde1	99	60.391	Oryzias_latipes_hsok
ENSHGLG00000000650	-	99	62.453	ENSOMEG00000015656	csde1	99	61.002	Oryzias_melastigma
ENSHGLG00000000650	-	99	76.662	ENSOGAG00000012127	CSDE1	94	76.537	Otolemur_garnettii
ENSHGLG00000000650	-	99	76.035	ENSOARG00000020034	CSDE1	94	75.910	Ovis_aries
ENSHGLG00000000650	-	99	80.301	ENSPPAG00000025861	CSDE1	99	76.412	Pan_paniscus
ENSHGLG00000000650	-	99	80.427	ENSPPRG00000006747	CSDE1	94	80.427	Panthera_pardus
ENSHGLG00000000650	-	99	80.427	ENSPTIG00000015468	CSDE1	99	80.427	Panthera_tigris_altaica
ENSHGLG00000000650	-	99	80.301	ENSPTRG00000033721	CSDE1	99	80.301	Pan_troglodytes
ENSHGLG00000000650	-	99	80.301	ENSPANG00000018873	CSDE1	99	76.412	Papio_anubis
ENSHGLG00000000650	-	99	59.900	ENSPKIG00000009459	csde1	99	59.900	Paramormyrops_kingsleyae
ENSHGLG00000000650	-	93	80.088	ENSPSIG00000003823	CSDE1	96	80.088	Pelodiscus_sinensis
ENSHGLG00000000650	-	99	59.000	ENSPMGG00000000772	csde1	99	59.000	Periophthalmus_magnuspinnatus
ENSHGLG00000000650	-	99	80.176	ENSPEMG00000020357	-	99	80.176	Peromyscus_maniculatus_bairdii
ENSHGLG00000000650	-	99	77.290	ENSPCIG00000022587	CSDE1	99	77.290	Phascolarctos_cinereus
ENSHGLG00000000650	-	98	59.510	ENSPFOG00000012664	csde1	99	59.510	Poecilia_formosa
ENSHGLG00000000650	-	97	57.075	ENSPLAG00000017680	csde1	93	57.075	Poecilia_latipinna
ENSHGLG00000000650	-	97	57.234	ENSPMEG00000005094	csde1	95	57.234	Poecilia_mexicana
ENSHGLG00000000650	-	99	61.434	ENSPREG00000011631	csde1	99	59.446	Poecilia_reticulata
ENSHGLG00000000650	-	99	80.176	ENSPPYG00000000996	CSDE1	99	80.176	Pongo_abelii
ENSHGLG00000000650	-	99	89.320	ENSPCAG00000014368	CSDE1	94	89.320	Procavia_capensis
ENSHGLG00000000650	-	65	69.084	ENSPCOG00000008223	-	89	69.084	Propithecus_coquereli
ENSHGLG00000000650	-	99	80.427	ENSPCOG00000017893	CSDE1	99	80.427	Propithecus_coquereli
ENSHGLG00000000650	-	99	71.016	ENSPVAG00000008225	CSDE1	94	71.016	Pteropus_vampyrus
ENSHGLG00000000650	-	99	61.893	ENSPNYG00000013745	csde1	99	60.145	Pundamilia_nyererei
ENSHGLG00000000650	-	99	62.750	ENSPNAG00000001958	csde1	99	60.250	Pygocentrus_nattereri
ENSHGLG00000000650	-	99	80.176	ENSRNOG00000061058	Csde1	99	80.176	Rattus_norvegicus
ENSHGLG00000000650	-	99	74.436	ENSRBIG00000038966	-	94	74.436	Rhinopithecus_bieti
ENSHGLG00000000650	-	99	80.873	ENSRBIG00000038088	-	99	80.218	Rhinopithecus_bieti
ENSHGLG00000000650	-	99	80.301	ENSRROG00000043101	CSDE1	98	79.097	Rhinopithecus_roxellana
ENSHGLG00000000650	-	99	80.050	ENSSBOG00000035592	CSDE1	94	80.050	Saimiri_boliviensis_boliviensis
ENSHGLG00000000650	-	99	73.275	ENSSHAG00000009831	CSDE1	99	73.275	Sarcophilus_harrisii
ENSHGLG00000000650	-	99	61.893	ENSSFOG00015007498	csde1	99	62.017	Scleropages_formosus
ENSHGLG00000000650	-	99	66.527	ENSSMAG00000007203	csde1	95	66.527	Scophthalmus_maximus
ENSHGLG00000000650	-	99	60.758	ENSSDUG00000015380	csde1	99	59.700	Seriola_dumerili
ENSHGLG00000000650	-	99	62.203	ENSSLDG00000008819	csde1	99	62.203	Seriola_lalandi_dorsalis
ENSHGLG00000000650	-	99	75.533	ENSSARG00000000738	CSDE1	94	75.408	Sorex_araneus
ENSHGLG00000000650	-	99	73.777	ENSSPUG00000008714	CSDE1	99	73.777	Sphenodon_punctatus
ENSHGLG00000000650	-	99	62.578	ENSSPAG00000000716	csde1	99	60.075	Stegastes_partitus
ENSHGLG00000000650	-	99	80.176	ENSSSCG00000006752	CSDE1	99	76.286	Sus_scrofa
ENSHGLG00000000650	-	99	73.342	ENSTGUG00000000972	CSDE1	99	73.342	Taeniopygia_guttata
ENSHGLG00000000650	-	99	56.713	ENSTRUG00000007996	csde1	99	56.713	Takifugu_rubripes
ENSHGLG00000000650	-	66	77.186	ENSTNIG00000010878	csde1	100	77.186	Tetraodon_nigroviridis
ENSHGLG00000000650	-	69	77.835	ENSTBEG00000011880	-	56	77.835	Tupaia_belangeri
ENSHGLG00000000650	-	99	75.659	ENSTTRG00000015583	CSDE1	94	75.533	Tursiops_truncatus
ENSHGLG00000000650	-	66	80.782	ENSUAMG00000021779	-	99	80.782	Ursus_americanus
ENSHGLG00000000650	-	87	69.939	ENSUAMG00000024289	-	99	69.939	Ursus_americanus
ENSHGLG00000000650	-	99	70.263	ENSUMAG00000009720	-	97	70.263	Ursus_maritimus
ENSHGLG00000000650	-	97	79.048	ENSUMAG00000011714	-	99	79.048	Ursus_maritimus
ENSHGLG00000000650	-	95	85.849	ENSVPAG00000000749	CSDE1	79	85.849	Vicugna_pacos
ENSHGLG00000000650	-	83	77.924	ENSVVUG00000009890	CSDE1	94	77.924	Vulpes_vulpes
ENSHGLG00000000650	-	99	68.875	ENSXETG00000021448	csde1	99	68.875	Xenopus_tropicalis
ENSHGLG00000000650	-	91	55.298	ENSXCOG00000000035	csde1	99	55.298	Xiphophorus_couchianus
ENSHGLG00000000650	-	99	62.078	ENSXMAG00000009080	csde1	99	60.341	Xiphophorus_maculatus