EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000000816 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 40002 bases
Position: chrJH602161.1:3570705-3610706
Accession: 101715085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000001015	ResIII	PF04851.15	7.5e-11	1	1
ENSHGLP00000001015	DEAD	PF00270.29	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000001056	-	3355	XM_004868558	ENSHGLP00000001015	1052 (aa)	XP_004868615	-

Gene Model

Click here to download ENSHGLG00000000816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000000816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000000816	-	57	39.905	ENSHGLG00000014938	CHD9	56	44.040
ENSHGLG00000000816	-	93	84.404	ENSHGLG00000003080	SMARCA1	93	84.404
ENSHGLG00000000816	-	96	90.149	ENSHGLG00000000317	-	95	90.200
ENSHGLG00000000816	-	54	42.334	ENSHGLG00000008933	CHD1L	62	43.031

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000000816	-	99	97.909	ENSG00000153147	SMARCA5	100	97.909	Homo_sapiens
ENSHGLG00000000816	-	99	97.814	ENSAMEG00000009585	SMARCA5	100	97.814	Ailuropoda_melanoleuca
ENSHGLG00000000816	-	91	96.612	ENSAPLG00000009206	SMARCA5	100	96.612	Anas_platyrhynchos
ENSHGLG00000000816	-	98	93.720	ENSACAG00000003038	SMARCA5	99	93.720	Anolis_carolinensis
ENSHGLG00000000816	-	99	97.719	ENSANAG00000019345	SMARCA5	99	99.096	Aotus_nancymaae
ENSHGLG00000000816	-	99	97.624	ENSBTAG00000003399	SMARCA5	100	97.624	Bos_taurus
ENSHGLG00000000816	-	99	97.909	ENSCJAG00000002735	SMARCA5	100	97.909	Callithrix_jacchus
ENSHGLG00000000816	-	99	97.814	ENSCAFG00000007525	SMARCA5	100	97.814	Canis_familiaris
ENSHGLG00000000816	-	98	97.674	ENSCAFG00020025641	SMARCA5	99	97.674	Canis_lupus_dingo
ENSHGLG00000000816	-	99	97.814	ENSCHIG00000013730	-	100	97.814	Capra_hircus
ENSHGLG00000000816	-	99	96.103	ENSCHIG00000016375	-	100	96.103	Capra_hircus
ENSHGLG00000000816	-	99	95.694	ENSTSYG00000009954	SMARCA5	99	99.396	Carlito_syrichta
ENSHGLG00000000816	-	92	99.380	ENSCAPG00000013747	SMARCA5	95	99.380	Cavia_aperea
ENSHGLG00000000816	-	99	98.478	ENSCPOG00000002259	SMARCA5	100	98.478	Cavia_porcellus
ENSHGLG00000000816	-	99	97.909	ENSCCAG00000027215	SMARCA5	99	99.197	Cebus_capucinus
ENSHGLG00000000816	-	99	98.004	ENSCATG00000044917	SMARCA5	100	98.004	Cercocebus_atys
ENSHGLG00000000816	-	94	99.698	ENSCLAG00000006153	SMARCA5	100	99.698	Chinchilla_lanigera
ENSHGLG00000000816	-	92	99.381	ENSCSAG00000003448	SMARCA5	100	99.381	Chlorocebus_sabaeus
ENSHGLG00000000816	-	89	98.405	ENSCHOG00000011724	SMARCA5	86	98.405	Choloepus_hoffmanni
ENSHGLG00000000816	-	95	98.195	ENSCPBG00000027535	SMARCA5	96	98.098	Chrysemys_picta_bellii
ENSHGLG00000000816	-	99	97.909	ENSCANG00000041629	SMARCA5	100	97.909	Colobus_angolensis_palliatus
ENSHGLG00000000816	-	99	97.624	ENSCGRG00001012719	Smarca5	99	97.624	Cricetulus_griseus_chok1gshd
ENSHGLG00000000816	-	95	99.498	ENSCGRG00000001417	Smarca5	99	99.597	Cricetulus_griseus_crigri
ENSHGLG00000000816	-	98	95.053	ENSDNOG00000009158	SMARCA5	97	95.397	Dasypus_novemcinctus
ENSHGLG00000000816	-	90	90.823	ENSDORG00000003466	Smarca5	97	90.823	Dipodomys_ordii
ENSHGLG00000000816	-	92	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSHGLG00000000816	-	99	98.099	ENSEASG00005001866	SMARCA5	100	98.099	Equus_asinus_asinus
ENSHGLG00000000816	-	99	98.099	ENSECAG00000002676	SMARCA5	100	98.099	Equus_caballus
ENSHGLG00000000816	-	94	95.065	ENSEEUG00000013176	SMARCA5	100	95.065	Erinaceus_europaeus
ENSHGLG00000000816	-	92	88.969	ENSELUG00000014653	SMARCA5	99	88.969	Esox_lucius
ENSHGLG00000000816	-	99	97.909	ENSFCAG00000004544	SMARCA5	100	97.909	Felis_catus
ENSHGLG00000000816	-	92	97.216	ENSFALG00000004987	SMARCA5	100	97.216	Ficedula_albicollis
ENSHGLG00000000816	-	95	99.400	ENSFDAG00000021016	SMARCA5	100	99.899	Fukomys_damarensis
ENSHGLG00000000816	-	96	86.944	ENSGMOG00000007519	SMARCA5	97	87.177	Gadus_morhua
ENSHGLG00000000816	-	94	97.487	ENSGALG00000009913	SMARCA5	96	97.200	Gallus_gallus
ENSHGLG00000000816	-	96	88.393	ENSGACG00000017238	SMARCA5	95	90.379	Gasterosteus_aculeatus
ENSHGLG00000000816	-	96	96.752	ENSGAGG00000019882	SMARCA5	96	97.998	Gopherus_agassizii
ENSHGLG00000000816	-	99	97.909	ENSGGOG00000012595	SMARCA5	99	99.295	Gorilla_gorilla
ENSHGLG00000000816	-	95	99.698	ENSHGLG00100018421	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000000816	-	100	98.102	ENSSTOG00000010683	SMARCA5	100	98.102	Ictidomys_tridecemlineatus
ENSHGLG00000000816	-	99	97.336	ENSJJAG00000014965	Smarca5	100	97.336	Jaculus_jaculus
ENSHGLG00000000816	-	95	94.516	ENSLACG00000007091	SMARCA5	99	94.516	Latimeria_chalumnae
ENSHGLG00000000816	-	94	92.081	ENSLOCG00000008966	SMARCA5	98	90.566	Lepisosteus_oculatus
ENSHGLG00000000816	-	99	97.719	ENSLAFG00000007795	SMARCA5	100	97.719	Loxodonta_africana
ENSHGLG00000000816	-	99	98.004	ENSMFAG00000043649	SMARCA5	100	98.004	Macaca_fascicularis
ENSHGLG00000000816	-	99	98.004	ENSMMUG00000000829	SMARCA5	100	98.004	Macaca_mulatta
ENSHGLG00000000816	-	99	98.004	ENSMNEG00000031916	SMARCA5	100	98.004	Macaca_nemestrina
ENSHGLG00000000816	-	99	98.004	ENSMLEG00000042393	SMARCA5	100	98.004	Mandrillus_leucophaeus
ENSHGLG00000000816	-	96	96.524	ENSMGAG00000003517	SMARCA5	100	96.524	Meleagris_gallopavo
ENSHGLG00000000816	-	94	99.698	ENSMAUG00000015902	Smarca5	98	99.698	Mesocricetus_auratus
ENSHGLG00000000816	-	99	98.004	ENSMICG00000003971	SMARCA5	100	98.004	Microcebus_murinus
ENSHGLG00000000816	-	99	97.431	ENSMOCG00000016986	-	99	97.431	Microtus_ochrogaster
ENSHGLG00000000816	-	99	95.802	ENSMODG00000000391	SMARCA5	95	98.898	Monodelphis_domestica
ENSHGLG00000000816	-	99	97.621	ENSMUSG00000031715	Smarca5	100	97.621	Mus_musculus
ENSHGLG00000000816	-	99	97.812	MGP_PahariEiJ_G0022862	Smarca5	100	97.812	Mus_pahari
ENSHGLG00000000816	-	99	98.099	ENSMLUG00000000468	SMARCA5	100	98.099	Myotis_lucifugus
ENSHGLG00000000816	-	99	97.812	ENSNGAG00000000441	Smarca5	100	97.812	Nannospalax_galili
ENSHGLG00000000816	-	99	98.004	ENSNLEG00000005383	SMARCA5	100	98.004	Nomascus_leucogenys
ENSHGLG00000000816	-	92	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSHGLG00000000816	-	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSHGLG00000000816	-	92	98.968	ENSOANG00000013921	SMARCA5	100	98.968	Ornithorhynchus_anatinus
ENSHGLG00000000816	-	92	99.794	ENSOCUG00000013042	SMARCA5	100	99.794	Oryctolagus_cuniculus
ENSHGLG00000000816	-	99	97.814	ENSOGAG00000009702	SMARCA5	100	97.814	Otolemur_garnettii
ENSHGLG00000000816	-	97	98.330	ENSOARG00000010589	SMARCA5	96	98.235	Ovis_aries
ENSHGLG00000000816	-	99	97.719	ENSPPAG00000028523	SMARCA5	99	99.194	Pan_paniscus
ENSHGLG00000000816	-	98	92.405	ENSPPRG00000004925	SMARCA5	97	93.634	Panthera_pardus
ENSHGLG00000000816	-	96	98.811	ENSPTIG00000020959	SMARCA5	97	98.811	Panthera_tigris_altaica
ENSHGLG00000000816	-	99	97.814	ENSPTRG00000016472	SMARCA5	99	99.295	Pan_troglodytes
ENSHGLG00000000816	-	99	98.004	ENSPANG00000001175	SMARCA5	100	98.004	Papio_anubis
ENSHGLG00000000816	-	93	90.779	ENSPKIG00000015699	SMARCA5	98	89.598	Paramormyrops_kingsleyae
ENSHGLG00000000816	-	93	91.002	ENSPKIG00000015885	SMARCA5	100	91.237	Paramormyrops_kingsleyae
ENSHGLG00000000816	-	95	95.888	ENSPSIG00000004177	SMARCA5	100	95.888	Pelodiscus_sinensis
ENSHGLG00000000816	-	92	89.712	ENSPMGG00000012316	SMARCA5	100	89.712	Periophthalmus_magnuspinnatus
ENSHGLG00000000816	-	95	99.498	ENSPEMG00000008060	Smarca5	98	99.498	Peromyscus_maniculatus_bairdii
ENSHGLG00000000816	-	96	69.715	ENSPMAG00000006011	SMARCA5	82	84.144	Petromyzon_marinus
ENSHGLG00000000816	-	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSHGLG00000000816	-	99	96.243	ENSPCIG00000003926	SMARCA5	95	98.898	Phascolarctos_cinereus
ENSHGLG00000000816	-	99	98.099	ENSPPYG00000015091	SMARCA5	100	98.099	Pongo_abelii
ENSHGLG00000000816	-	86	89.339	ENSPCAG00000014230	SMARCA5	88	89.724	Procavia_capensis
ENSHGLG00000000816	-	99	95.152	ENSPCOG00000026744	SMARCA5	100	95.152	Propithecus_coquereli
ENSHGLG00000000816	-	99	97.810	ENSPVAG00000006482	SMARCA5	100	97.810	Pteropus_vampyrus
ENSHGLG00000000816	-	95	88.955	ENSPNAG00000027824	SMARCA5	97	90.145	Pygocentrus_nattereri
ENSHGLG00000000816	-	94	99.497	ENSRNOG00000018149	Smarca5	99	99.497	Rattus_norvegicus
ENSHGLG00000000816	-	99	97.816	ENSRBIG00000044644	SMARCA5	100	97.816	Rhinopithecus_bieti
ENSHGLG00000000816	-	98	97.677	ENSRROG00000029591	SMARCA5	99	99.296	Rhinopithecus_roxellana
ENSHGLG00000000816	-	99	98.099	ENSSBOG00000036257	SMARCA5	100	98.099	Saimiri_boliviensis_boliviensis
ENSHGLG00000000816	-	94	98.993	ENSSHAG00000008464	SMARCA5	100	98.993	Sarcophilus_harrisii
ENSHGLG00000000816	-	95	89.631	ENSSFOG00015013252	SMARCA5	97	89.721	Scleropages_formosus
ENSHGLG00000000816	-	98	93.975	ENSSPUG00000007604	SMARCA5	99	96.281	Sphenodon_punctatus
ENSHGLG00000000816	-	99	97.719	ENSSSCG00000009047	SMARCA5	100	97.719	Sus_scrofa
ENSHGLG00000000816	-	96	95.933	ENSTGUG00000002408	SMARCA5	100	95.933	Taeniopygia_guttata
ENSHGLG00000000816	-	98	97.674	ENSUAMG00000023495	SMARCA5	99	97.674	Ursus_americanus
ENSHGLG00000000816	-	95	99.003	ENSUMAG00000015324	SMARCA5	97	99.003	Ursus_maritimus
ENSHGLG00000000816	-	99	97.719	ENSVPAG00000008982	SMARCA5	100	97.719	Vicugna_pacos
ENSHGLG00000000816	-	99	97.719	ENSVVUG00000017473	SMARCA5	100	97.719	Vulpes_vulpes
ENSHGLG00000000816	-	95	89.033	ENSXETG00000017566	smarca5	95	93.031	Xenopus_tropicalis