EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000001118 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 23574 bases
Position: chrJH602132.1:600688-624261
Accession: 101717275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000001449	KH_1	PF00013.29	8.9e-07	1	1
ENSHGLP00000001449	DEAD	PF00270.29	2.3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000001493	-	1692	XM_004864011	ENSHGLP00000001449	563 (aa)	XP_004864068	-

Gene Model

Click here to download ENSHGLG00000001118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000001118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000001118	-	55	30.421	ENSHGLG00000006433	-	79	30.421
ENSHGLG00000001118	-	61	36.286	ENSHGLG00000007623	DDX47	75	36.286
ENSHGLG00000001118	-	61	30.748	ENSHGLG00000019202	DDX55	59	30.748
ENSHGLG00000001118	-	68	31.771	ENSHGLG00000004316	DDX6	77	31.771
ENSHGLG00000001118	-	68	39.012	ENSHGLG00000010084	-	61	39.012
ENSHGLG00000001118	-	58	32.551	ENSHGLG00000005983	-	50	32.551
ENSHGLG00000001118	-	67	39.850	ENSHGLG00000004805	Ddx3x	60	39.850
ENSHGLG00000001118	-	68	37.500	ENSHGLG00000015092	DDX41	63	37.500
ENSHGLG00000001118	-	80	37.086	ENSHGLG00000010024	DDX42	50	37.086
ENSHGLG00000001118	-	78	37.474	ENSHGLG00000004292	DDX23	56	38.889
ENSHGLG00000001118	-	63	31.507	ENSHGLG00000014198	-	59	31.507
ENSHGLG00000001118	-	61	35.795	ENSHGLG00000006789	DDX49	73	35.795
ENSHGLG00000001118	-	75	33.879	ENSHGLG00000016068	DDX59	66	33.879
ENSHGLG00000001118	-	67	34.351	ENSHGLG00000006235	-	65	34.351
ENSHGLG00000001118	-	80	44.053	ENSHGLG00000001771	DDX5	75	43.100
ENSHGLG00000001118	-	80	43.612	ENSHGLG00000012568	DDX17	61	43.355
ENSHGLG00000001118	-	64	30.641	ENSHGLG00000004635	EIF4A3	86	30.641
ENSHGLG00000001118	-	65	35.200	ENSHGLG00000003594	DDX4	50	35.200
ENSHGLG00000001118	-	58	36.873	ENSHGLG00000016324	-	62	34.660
ENSHGLG00000001118	-	64	32.603	ENSHGLG00000015574	EIF4A2	88	32.603
ENSHGLG00000001118	-	67	31.842	ENSHGLG00000011735	EIF4A1	92	31.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000001118	-	100	82.624	ENSAMEG00000007851	-	87	82.624	Ailuropoda_melanoleuca
ENSHGLG00000001118	-	100	77.442	ENSBTAG00000021814	-	87	77.442	Bos_taurus
ENSHGLG00000001118	-	100	74.956	ENSCAFG00020002717	-	86	74.956	Canis_lupus_dingo
ENSHGLG00000001118	-	100	80.995	ENSCAFG00020010029	-	87	80.995	Canis_lupus_dingo
ENSHGLG00000001118	-	100	77.620	ENSCHIG00000017351	-	87	77.620	Capra_hircus
ENSHGLG00000001118	-	89	84.830	ENSCAPG00000004247	-	99	84.830	Cavia_aperea
ENSHGLG00000001118	-	100	93.428	ENSCPOG00000003991	-	87	93.428	Cavia_porcellus
ENSHGLG00000001118	-	99	85.000	ENSCLAG00000010261	-	86	85.080	Chinchilla_lanigera
ENSHGLG00000001118	-	69	76.923	ENSCHOG00000003450	-	69	76.923	Choloepus_hoffmanni
ENSHGLG00000001118	-	100	87.389	ENSCGRG00001001145	Ddx43	87	87.389	Cricetulus_griseus_chok1gshd
ENSHGLG00000001118	-	100	87.211	ENSCGRG00000010217	Ddx43	100	87.211	Cricetulus_griseus_crigri
ENSHGLG00000001118	-	100	83.156	ENSDNOG00000017589	-	87	83.156	Dasypus_novemcinctus
ENSHGLG00000001118	-	100	85.613	ENSDORG00000030010	Ddx43	87	85.613	Dipodomys_ordii
ENSHGLG00000001118	-	77	86.726	ENSETEG00000001887	-	68	86.726	Echinops_telfairi
ENSHGLG00000001118	-	99	84.547	ENSEASG00005004346	-	80	84.547	Equus_asinus_asinus
ENSHGLG00000001118	-	99	84.547	ENSECAG00000017971	DDX43	88	84.547	Equus_caballus
ENSHGLG00000001118	-	100	80.462	ENSFCAG00000031631	-	87	80.462	Felis_catus
ENSHGLG00000001118	-	100	100.000	ENSHGLG00100011895	-	88	100.000	Heterocephalus_glaber_male
ENSHGLG00000001118	-	100	76.199	ENSSTOG00000032538	-	100	76.199	Ictidomys_tridecemlineatus
ENSHGLG00000001118	-	100	85.258	ENSJJAG00000014184	Ddx43	87	85.258	Jaculus_jaculus
ENSHGLG00000001118	-	100	84.071	ENSLAFG00000012755	-	93	84.071	Loxodonta_africana
ENSHGLG00000001118	-	100	86.856	ENSMAUG00000001441	Ddx43	87	86.856	Mesocricetus_auratus
ENSHGLG00000001118	-	100	86.323	ENSMOCG00000012956	Ddx43	87	86.323	Microtus_ochrogaster
ENSHGLG00000001118	-	100	87.034	MGP_CAROLIEiJ_G0032467	Ddx43	87	87.034	Mus_caroli
ENSHGLG00000001118	-	100	87.389	ENSMUSG00000070291	Ddx43	87	87.389	Mus_musculus
ENSHGLG00000001118	-	90	88.095	MGP_PahariEiJ_G0015333	Ddx43	86	88.095	Mus_pahari
ENSHGLG00000001118	-	100	87.389	MGP_SPRETEiJ_G0033607	Ddx43	87	87.389	Mus_spretus
ENSHGLG00000001118	-	100	83.333	ENSMPUG00000004342	-	87	83.333	Mustela_putorius_furo
ENSHGLG00000001118	-	100	82.832	ENSMLUG00000017604	-	87	82.832	Myotis_lucifugus
ENSHGLG00000001118	-	100	85.968	ENSNGAG00000015102	Ddx43	87	85.968	Nannospalax_galili
ENSHGLG00000001118	-	86	87.500	ENSOPRG00000013523	-	86	87.500	Ochotona_princeps
ENSHGLG00000001118	-	97	88.603	ENSODEG00000016207	-	99	88.603	Octodon_degus
ENSHGLG00000001118	-	99	67.318	ENSOCUG00000025811	-	87	67.318	Oryctolagus_cuniculus
ENSHGLG00000001118	-	100	80.107	ENSOCUG00000006338	-	87	80.107	Oryctolagus_cuniculus
ENSHGLG00000001118	-	100	77.620	ENSOARG00000010873	-	87	77.620	Ovis_aries
ENSHGLG00000001118	-	100	80.639	ENSPTIG00000017842	-	87	80.639	Panthera_tigris_altaica
ENSHGLG00000001118	-	100	87.567	ENSPEMG00000023986	Ddx43	100	87.567	Peromyscus_maniculatus_bairdii
ENSHGLG00000001118	-	99	81.705	ENSPCAG00000005962	-	87	81.705	Procavia_capensis
ENSHGLG00000001118	-	100	85.106	ENSPVAG00000012718	-	99	85.106	Pteropus_vampyrus
ENSHGLG00000001118	-	100	87.567	ENSRNOG00000050868	Ddx43	87	87.567	Rattus_norvegicus
ENSHGLG00000001118	-	97	82.267	ENSSARG00000013493	-	99	82.267	Sorex_araneus
ENSHGLG00000001118	-	100	77.975	ENSSSCG00000004287	-	87	77.975	Sus_scrofa
ENSHGLG00000001118	-	100	71.403	ENSTTRG00000001488	-	99	71.403	Tursiops_truncatus
ENSHGLG00000001118	-	77	82.838	ENSUAMG00000012894	-	68	82.838	Ursus_americanus
ENSHGLG00000001118	-	100	82.979	ENSUMAG00000012291	-	87	82.979	Ursus_maritimus
ENSHGLG00000001118	-	93	73.194	ENSVPAG00000004969	-	86	73.194	Vicugna_pacos
ENSHGLG00000001118	-	100	80.995	ENSVVUG00000013908	-	87	80.995	Vulpes_vulpes