EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000001150 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 39-like
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 38870 bases
Position: chrJH602250.1:1194645-1233514
Accession: 101723500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	1	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	2	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	3	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	4	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	5	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	6	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	7	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	8	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	9	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	10	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	11	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	12	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	13	14
ENSHGLP00000001500	zf-C2H2	PF00096.26	6.8e-66	14	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	1	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	2	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	3	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	4	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	5	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	6	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	7	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	8	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	9	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	10	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	11	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	12	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	13	14
ENSHGLP00000001499	zf-C2H2	PF00096.26	1.6e-65	14	14
ENSHGLP00000001500	zf-met	PF12874.7	3e-08	1	4
ENSHGLP00000001500	zf-met	PF12874.7	3e-08	2	4
ENSHGLP00000001500	zf-met	PF12874.7	3e-08	3	4
ENSHGLP00000001500	zf-met	PF12874.7	3e-08	4	4
ENSHGLP00000001499	zf-met	PF12874.7	6e-08	1	4
ENSHGLP00000001499	zf-met	PF12874.7	6e-08	2	4
ENSHGLP00000001499	zf-met	PF12874.7	6e-08	3	4
ENSHGLP00000001499	zf-met	PF12874.7	6e-08	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000001543	-	2844	XM_004874739	ENSHGLP00000001499	709 (aa)	XP_004874796	UPI00034F75CB
ENSHGLT00000001544	-	2834	-	ENSHGLP00000001500	677 (aa)	XP_021107765	G5C987

Gene Model

Click here to download ENSHGLG00000001150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000001150's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000001150	-	62	38.686	ENSHGLG00000009439	SNAI2	51	38.686
ENSHGLG00000001150	-	82	39.927	ENSHGLG00000003010	PRDM5	73	39.927
ENSHGLG00000001150	-	64	33.574	ENSHGLG00000002054	ZNF526	74	31.081
ENSHGLG00000001150	-	62	35.897	ENSHGLG00000018743	-	84	36.207
ENSHGLG00000001150	-	82	43.671	ENSHGLG00000014609	-	72	43.671
ENSHGLG00000001150	-	91	46.231	ENSHGLG00000018394	-	97	46.231
ENSHGLG00000001150	-	58	42.453	ENSHGLG00000005310	SNAI1	54	42.453
ENSHGLG00000001150	-	99	44.193	ENSHGLG00000000969	ZNF81	97	44.193
ENSHGLG00000001150	-	67	40.741	ENSHGLG00000007674	ZNF423	99	40.741
ENSHGLG00000001150	-	99	41.552	ENSHGLG00000005362	-	87	41.552
ENSHGLG00000001150	-	84	42.500	ENSHGLG00000015628	ZNF628	58	42.169
ENSHGLG00000001150	-	65	40.000	ENSHGLG00000004253	WT1	55	40.000
ENSHGLG00000001150	-	67	38.406	ENSHGLG00000000648	ZNF236	67	38.406
ENSHGLG00000001150	-	82	43.534	ENSHGLG00000003657	ZNF235	76	44.750
ENSHGLG00000001150	-	99	51.786	ENSHGLG00000018048	ZNF550	65	51.786
ENSHGLG00000001150	-	99	42.474	ENSHGLG00000003200	ZNF226	98	42.509
ENSHGLG00000001150	-	65	36.641	ENSHGLG00000004173	GTF3A	81	37.786
ENSHGLG00000001150	-	99	52.326	ENSHGLG00000016406	-	99	51.550
ENSHGLG00000001150	-	54	31.818	ENSHGLG00000011024	-	74	31.818
ENSHGLG00000001150	-	77	46.667	ENSHGLG00000007477	ZNF200	59	46.667
ENSHGLG00000001150	-	82	50.725	ENSHGLG00000019054	-	99	50.725
ENSHGLG00000001150	-	100	40.249	ENSHGLG00000008584	ZNF667	98	40.664
ENSHGLG00000001150	-	65	46.914	ENSHGLG00000012086	ZNF784	68	46.914
ENSHGLG00000001150	-	64	34.524	ENSHGLG00000021435	ZNF646	55	34.524
ENSHGLG00000001150	-	77	34.364	ENSHGLG00000008901	ZFP64	71	34.266
ENSHGLG00000001150	-	82	50.352	ENSHGLG00000010373	ZNF768	51	50.352
ENSHGLG00000001150	-	99	51.840	ENSHGLG00000009291	-	98	51.840
ENSHGLG00000001150	-	99	46.835	ENSHGLG00000005975	-	98	44.316
ENSHGLG00000001150	-	81	30.233	ENSHGLG00000003903	ZNF574	80	32.692
ENSHGLG00000001150	-	85	34.873	ENSHGLG00000011504	ZNF319	90	34.624
ENSHGLG00000001150	-	100	55.253	ENSHGLG00000005282	ZNF2	99	55.253
ENSHGLG00000001150	-	99	46.154	ENSHGLG00000014546	-	97	46.154
ENSHGLG00000001150	-	99	42.857	ENSHGLG00000000728	ZNF202	63	44.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000001150	-	95	83.767	ENSCLAG00000001377	-	100	83.767	Chinchilla_lanigera
ENSHGLG00000001150	-	99	51.378	ENSCGRG00001010752	2610008E11Rik	95	44.272	Cricetulus_griseus_chok1gshd
ENSHGLG00000001150	-	99	51.378	ENSCGRG00000008922	2610008E11Rik	95	44.272	Cricetulus_griseus_crigri
ENSHGLG00000001150	-	99	77.224	ENSFDAG00000020138	-	99	74.259	Fukomys_damarensis
ENSHGLG00000001150	-	100	87.079	ENSFDAG00000005609	-	91	77.279	Fukomys_damarensis
ENSHGLG00000001150	-	100	100.000	ENSHGLG00100009889	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000001150	-	99	80.244	ENSHGLG00100005328	-	99	76.996	Heterocephalus_glaber_male
ENSHGLG00000001150	-	99	42.917	ENSMAUG00000007597	2610008E11Rik	94	42.917	Mesocricetus_auratus
ENSHGLG00000001150	-	92	54.867	ENSNGAG00000014809	2610008E11Rik	91	54.867	Nannospalax_galili
ENSHGLG00000001150	-	99	57.662	ENSOCUG00000027634	-	98	54.031	Oryctolagus_cuniculus
ENSHGLG00000001150	-	97	59.882	ENSRNOG00000014331	Zfp810	99	59.882	Rattus_norvegicus