EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000001181 (Gene tree)
Gene ID: -
Gene Symbol: SREK1
Alias: DKFZp564B176|SFRS12|SRrp508|SRrp86
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 36869 bases
Position: chrJH602128.1:3645968-3682836
Accession: 101706949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000001549	RRM_1	PF00076.22	3.3e-22	1	2
ENSHGLP00000001549	RRM_1	PF00076.22	3.3e-22	2	2
ENSHGLP00000001547	RRM_1	PF00076.22	3.3e-13	1	1
ENSHGLP00000001548	RRM_1	PF00076.22	3.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000001592	SREK1-202	4281	-	ENSHGLP00000001548	512 (aa)	-	UPI00034FD6E9
ENSHGLT00000001593	SREK1-203	1809	XM_004862849	ENSHGLP00000001549	602 (aa)	XP_004862906	-
ENSHGLT00000001591	SREK1-201	4537	-	ENSHGLP00000001547	512 (aa)	-	UPI00034FD6E9

Gene Model

Click here to download ENSHGLG00000001181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000001181's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000001181	SREK1	100	96.094	ENSG00000153914	SREK1	100	100.000	Homo_sapiens
ENSHGLG00000001181	SREK1	100	95.914	ENSAMEG00000011327	SREK1	98	88.474	Ailuropoda_melanoleuca
ENSHGLG00000001181	SREK1	51	66.409	ENSATEG00000009450	srek1	50	75.743	Anabas_testudineus
ENSHGLG00000001181	SREK1	59	89.859	ENSAPLG00000003948	-	84	90.616	Anas_platyrhynchos
ENSHGLG00000001181	SREK1	100	96.109	ENSANAG00000031358	SREK1	98	96.939	Aotus_nancymaae
ENSHGLG00000001181	SREK1	100	93.411	ENSBTAG00000007321	SREK1	98	97.959	Bos_taurus
ENSHGLG00000001181	SREK1	100	96.498	ENSCJAG00000015950	SREK1	100	96.498	Callithrix_jacchus
ENSHGLG00000001181	SREK1	100	96.094	ENSCAFG00000007560	SREK1	100	96.094	Canis_familiaris
ENSHGLG00000001181	SREK1	100	96.109	ENSTSYG00000036957	SREK1	98	100.000	Carlito_syrichta
ENSHGLG00000001181	SREK1	70	98.195	ENSCPOG00000008925	SREK1	100	88.372	Cavia_porcellus
ENSHGLG00000001181	SREK1	100	96.304	ENSCCAG00000020591	SREK1	100	96.109	Cebus_capucinus
ENSHGLG00000001181	SREK1	100	95.914	ENSCATG00000031482	SREK1	98	98.980	Cercocebus_atys
ENSHGLG00000001181	SREK1	100	98.242	ENSCLAG00000005024	SREK1	100	98.242	Chinchilla_lanigera
ENSHGLG00000001181	SREK1	66	90.476	ENSCHOG00000004956	SREK1	64	90.476	Choloepus_hoffmanni
ENSHGLG00000001181	SREK1	51	92.557	ENSCPBG00000026866	SREK1	87	94.198	Chrysemys_picta_bellii
ENSHGLG00000001181	SREK1	100	95.720	ENSCANG00000030421	SREK1	98	98.980	Colobus_angolensis_palliatus
ENSHGLG00000001181	SREK1	97	87.960	ENSCGRG00001015222	-	97	88.294	Cricetulus_griseus_chok1gshd
ENSHGLG00000001181	SREK1	97	87.960	ENSCGRG00000002130	-	97	88.294	Cricetulus_griseus_crigri
ENSHGLG00000001181	SREK1	100	94.531	ENSDNOG00000010327	SREK1	98	87.134	Dasypus_novemcinctus
ENSHGLG00000001181	SREK1	67	96.047	ENSETEG00000012977	SREK1	77	85.979	Echinops_telfairi
ENSHGLG00000001181	SREK1	100	96.484	ENSFCAG00000040658	-	100	96.289	Felis_catus
ENSHGLG00000001181	SREK1	100	67.857	ENSFALG00000009835	SREK1	74	92.669	Ficedula_albicollis
ENSHGLG00000001181	SREK1	100	97.852	ENSFDAG00000017844	SREK1	100	97.852	Fukomys_damarensis
ENSHGLG00000001181	SREK1	76	91.444	ENSGAGG00000006087	SREK1	96	93.255	Gopherus_agassizii
ENSHGLG00000001181	SREK1	100	95.720	ENSGGOG00000004737	SREK1	98	98.980	Gorilla_gorilla
ENSHGLG00000001181	SREK1	100	98.047	ENSHGLG00100003207	SREK1	100	98.047	Heterocephalus_glaber_male
ENSHGLG00000001181	SREK1	94	53.427	ENSIPUG00000016851	srek1	59	66.476	Ictalurus_punctatus
ENSHGLG00000001181	SREK1	100	96.875	ENSSTOG00000008850	SREK1	98	98.980	Ictidomys_tridecemlineatus
ENSHGLG00000001181	SREK1	98	94.098	ENSLAFG00000013853	SREK1	98	93.423	Loxodonta_africana
ENSHGLG00000001181	SREK1	100	95.914	ENSMFAG00000039823	SREK1	98	98.980	Macaca_fascicularis
ENSHGLG00000001181	SREK1	100	95.914	ENSMMUG00000014586	SREK1	100	95.914	Macaca_mulatta
ENSHGLG00000001181	SREK1	100	95.914	ENSMNEG00000030723	SREK1	98	98.980	Macaca_nemestrina
ENSHGLG00000001181	SREK1	100	95.720	ENSMLEG00000039078	SREK1	98	98.980	Mandrillus_leucophaeus
ENSHGLG00000001181	SREK1	97	87.980	ENSMAUG00000010066	-	97	88.462	Mesocricetus_auratus
ENSHGLG00000001181	SREK1	100	96.693	ENSMICG00000034959	SREK1	98	98.980	Microcebus_murinus
ENSHGLG00000001181	SREK1	96	88.176	ENSMOCG00000001536	-	97	88.475	Microtus_ochrogaster
ENSHGLG00000001181	SREK1	100	78.363	ENSMODG00000019665	SREK1	98	81.198	Monodelphis_domestica
ENSHGLG00000001181	SREK1	71	60.998	ENSMALG00000017086	srek1	91	88.889	Monopterus_albus
ENSHGLG00000001181	SREK1	100	95.898	ENSMPUG00000014736	SREK1	98	89.088	Mustela_putorius_furo
ENSHGLG00000001181	SREK1	100	95.543	ENSMLUG00000014801	SREK1	100	95.543	Myotis_lucifugus
ENSHGLG00000001181	SREK1	100	96.109	ENSNLEG00000003827	SREK1	98	98.980	Nomascus_leucogenys
ENSHGLG00000001181	SREK1	88	87.103	ENSOPRG00000012111	SREK1	96	85.472	Ochotona_princeps
ENSHGLG00000001181	SREK1	97	95.409	ENSODEG00000016450	SREK1	100	95.409	Octodon_degus
ENSHGLG00000001181	SREK1	75	82.018	ENSOANG00000005029	SREK1	90	81.928	Ornithorhynchus_anatinus
ENSHGLG00000001181	SREK1	100	91.068	ENSOCUG00000001319	SREK1	97	90.461	Oryctolagus_cuniculus
ENSHGLG00000001181	SREK1	100	93.750	ENSOGAG00000016463	SREK1	100	93.750	Otolemur_garnettii
ENSHGLG00000001181	SREK1	100	92.248	ENSOARG00000006005	SREK1	82	91.473	Ovis_aries
ENSHGLG00000001181	SREK1	100	87.160	ENSPPAG00000031605	SREK1	92	100.000	Pan_paniscus
ENSHGLG00000001181	SREK1	100	92.773	ENSPPRG00000024617	SREK1	100	92.773	Panthera_pardus
ENSHGLG00000001181	SREK1	100	95.898	ENSPTIG00000006608	SREK1	98	89.414	Panthera_tigris_altaica
ENSHGLG00000001181	SREK1	100	95.720	ENSPTRG00000016936	SREK1	98	98.980	Pan_troglodytes
ENSHGLG00000001181	SREK1	100	95.914	ENSPANG00000008953	SREK1	98	98.980	Papio_anubis
ENSHGLG00000001181	SREK1	97	88.275	ENSPEMG00000024051	-	97	88.682	Peromyscus_maniculatus_bairdii
ENSHGLG00000001181	SREK1	100	96.109	ENSPPYG00000015515	SREK1	98	89.902	Pongo_abelii
ENSHGLG00000001181	SREK1	96	90.224	ENSPCAG00000004955	SREK1	86	91.446	Procavia_capensis
ENSHGLG00000001181	SREK1	100	96.304	ENSPCOG00000026230	SREK1	98	100.000	Propithecus_coquereli
ENSHGLG00000001181	SREK1	100	94.747	ENSPVAG00000009763	SREK1	98	88.835	Pteropus_vampyrus
ENSHGLG00000001181	SREK1	76	58.621	ENSPNAG00000004328	srek1	72	66.062	Pygocentrus_nattereri
ENSHGLG00000001181	SREK1	98	91.993	ENSRBIG00000033818	SREK1	98	98.980	Rhinopithecus_bieti
ENSHGLG00000001181	SREK1	100	95.914	ENSRROG00000017210	SREK1	98	98.980	Rhinopithecus_roxellana
ENSHGLG00000001181	SREK1	100	96.304	ENSSBOG00000031230	SREK1	100	96.109	Saimiri_boliviensis_boliviensis
ENSHGLG00000001181	SREK1	100	81.092	ENSSHAG00000003514	SREK1	100	79.400	Sarcophilus_harrisii
ENSHGLG00000001181	SREK1	72	56.250	ENSSMAG00000011808	srek1	58	80.851	Scophthalmus_maximus
ENSHGLG00000001181	SREK1	76	96.512	ENSSARG00000000795	SREK1	70	96.369	Sorex_araneus
ENSHGLG00000001181	SREK1	50	88.926	ENSSPUG00000016553	SREK1	90	90.780	Sphenodon_punctatus
ENSHGLG00000001181	SREK1	100	96.311	ENSSSCG00000032726	SREK1	100	96.311	Sus_scrofa
ENSHGLG00000001181	SREK1	100	70.849	ENSTGUG00000002935	SREK1	54	91.241	Taeniopygia_guttata
ENSHGLG00000001181	SREK1	100	95.914	ENSTTRG00000009684	SREK1	100	86.010	Tursiops_truncatus
ENSHGLG00000001181	SREK1	100	92.188	ENSUMAG00000008191	SREK1	98	88.436	Ursus_maritimus
ENSHGLG00000001181	SREK1	100	95.117	ENSVPAG00000008654	SREK1	100	88.174	Vicugna_pacos
ENSHGLG00000001181	SREK1	86	63.619	ENSXETG00000021460	srek1	83	66.231	Xenopus_tropicalis