EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000001234 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 26267 bases
Position: chrJH602218.1:1427530-1453796
Accession: 101722330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000001619	MRP-S27	PF10037.9	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000001663	PTCD2-201	1152	XM_013068517	ENSHGLP00000001619	383 (aa)	XP_021106326	UPI00034F3126

Gene Model

Click here to download ENSHGLG00000001234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000001234's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000001234	PTCD2	100	75.718	ENSG00000049883	PTCD2	100	78.325	Homo_sapiens
ENSHGLG00000001234	PTCD2	97	44.892	ENSAPOG00000020682	ptcd2	94	44.892	Acanthochromis_polyacanthus
ENSHGLG00000001234	PTCD2	97	75.741	ENSAMEG00000007194	PTCD2	96	75.741	Ailuropoda_melanoleuca
ENSHGLG00000001234	PTCD2	90	42.407	ENSACIG00000002053	ptcd2	100	42.407	Amphilophus_citrinellus
ENSHGLG00000001234	PTCD2	97	43.548	ENSAOCG00000006616	ptcd2	93	43.548	Amphiprion_ocellaris
ENSHGLG00000001234	PTCD2	97	43.548	ENSAPEG00000022926	ptcd2	93	43.548	Amphiprion_percula
ENSHGLG00000001234	PTCD2	93	58.939	ENSACAG00000009747	PTCD2	91	58.939	Anolis_carolinensis
ENSHGLG00000001234	PTCD2	100	75.979	ENSANAG00000029353	PTCD2	99	75.979	Aotus_nancymaae
ENSHGLG00000001234	PTCD2	91	45.115	ENSACLG00000027742	ptcd2	89	45.115	Astatotilapia_calliptera
ENSHGLG00000001234	PTCD2	91	42.090	ENSAMXG00000029404	ptcd2	95	42.090	Astyanax_mexicanus
ENSHGLG00000001234	PTCD2	100	75.781	ENSBTAG00000014675	PTCD2	100	75.781	Bos_taurus
ENSHGLG00000001234	PTCD2	100	75.457	ENSCJAG00000016364	PTCD2	99	75.457	Callithrix_jacchus
ENSHGLG00000001234	PTCD2	99	71.990	ENSCAFG00000007982	PTCD2	90	71.990	Canis_familiaris
ENSHGLG00000001234	PTCD2	90	74.566	ENSCAFG00020019147	PTCD2	97	74.566	Canis_lupus_dingo
ENSHGLG00000001234	PTCD2	100	76.042	ENSCHIG00000017118	PTCD2	100	76.042	Capra_hircus
ENSHGLG00000001234	PTCD2	100	81.201	ENSCPOG00000040168	PTCD2	100	81.201	Cavia_porcellus
ENSHGLG00000001234	PTCD2	100	75.196	ENSCCAG00000029389	-	99	75.196	Cebus_capucinus
ENSHGLG00000001234	PTCD2	83	71.473	ENSCCAG00000021996	-	98	71.473	Cebus_capucinus
ENSHGLG00000001234	PTCD2	100	75.196	ENSCATG00000019069	PTCD2	100	75.196	Cercocebus_atys
ENSHGLG00000001234	PTCD2	100	82.768	ENSCLAG00000000072	PTCD2	100	82.768	Chinchilla_lanigera
ENSHGLG00000001234	PTCD2	100	75.718	ENSCSAG00000015623	PTCD2	100	75.718	Chlorocebus_sabaeus
ENSHGLG00000001234	PTCD2	90	57.471	ENSCHOG00000010634	PTCD2	100	57.471	Choloepus_hoffmanni
ENSHGLG00000001234	PTCD2	94	55.556	ENSCPBG00000000216	PTCD2	92	55.556	Chrysemys_picta_bellii
ENSHGLG00000001234	PTCD2	100	75.196	ENSCANG00000035636	PTCD2	99	75.196	Colobus_angolensis_palliatus
ENSHGLG00000001234	PTCD2	100	72.063	ENSCGRG00001015289	Ptcd2	84	72.063	Cricetulus_griseus_chok1gshd
ENSHGLG00000001234	PTCD2	100	72.063	ENSCGRG00000006193	Ptcd2	84	72.063	Cricetulus_griseus_crigri
ENSHGLG00000001234	PTCD2	91	44.540	ENSCVAG00000001285	ptcd2	89	44.540	Cyprinodon_variegatus
ENSHGLG00000001234	PTCD2	94	45.556	ENSDARG00000035391	ptcd2	94	45.556	Danio_rerio
ENSHGLG00000001234	PTCD2	95	73.151	ENSDNOG00000008719	PTCD2	95	73.151	Dasypus_novemcinctus
ENSHGLG00000001234	PTCD2	100	73.902	ENSDORG00000004921	Ptcd2	100	73.902	Dipodomys_ordii
ENSHGLG00000001234	PTCD2	94	67.760	ENSETEG00000016542	PTCD2	94	67.760	Echinops_telfairi
ENSHGLG00000001234	PTCD2	97	76.944	ENSEASG00005018038	PTCD2	98	76.944	Equus_asinus_asinus
ENSHGLG00000001234	PTCD2	97	77.089	ENSECAG00000007022	PTCD2	96	77.089	Equus_caballus
ENSHGLG00000001234	PTCD2	100	68.930	ENSEEUG00000014031	PTCD2	99	68.930	Erinaceus_europaeus
ENSHGLG00000001234	PTCD2	93	48.876	ENSELUG00000003584	ptcd2	93	48.876	Esox_lucius
ENSHGLG00000001234	PTCD2	100	68.407	ENSFCAG00000045432	PTCD2	82	68.407	Felis_catus
ENSHGLG00000001234	PTCD2	85	50.765	ENSFALG00000010299	PTCD2	99	50.765	Ficedula_albicollis
ENSHGLG00000001234	PTCD2	100	83.290	ENSFDAG00000018461	PTCD2	100	83.290	Fukomys_damarensis
ENSHGLG00000001234	PTCD2	91	50.142	ENSGMOG00000003637	ptcd2	91	50.142	Gadus_morhua
ENSHGLG00000001234	PTCD2	92	48.725	ENSGALG00000038260	PTCD2	100	47.396	Gallus_gallus
ENSHGLG00000001234	PTCD2	94	59.610	ENSGAGG00000021952	PTCD2	92	59.610	Gopherus_agassizii
ENSHGLG00000001234	PTCD2	100	75.718	ENSGGOG00000010695	PTCD2	99	75.718	Gorilla_gorilla
ENSHGLG00000001234	PTCD2	91	45.115	ENSHBUG00000009191	ptcd2	89	45.115	Haplochromis_burtoni
ENSHGLG00000001234	PTCD2	100	99.739	ENSHGLG00100015419	PTCD2	100	99.739	Heterocephalus_glaber_male
ENSHGLG00000001234	PTCD2	93	47.765	ENSHCOG00000001703	ptcd2	92	47.765	Hippocampus_comes
ENSHGLG00000001234	PTCD2	89	44.737	ENSIPUG00000006080	ptcd2	95	44.658	Ictalurus_punctatus
ENSHGLG00000001234	PTCD2	99	76.903	ENSSTOG00000006596	PTCD2	99	76.903	Ictidomys_tridecemlineatus
ENSHGLG00000001234	PTCD2	100	74.935	ENSJJAG00000024388	Ptcd2	100	74.935	Jaculus_jaculus
ENSHGLG00000001234	PTCD2	94	44.167	ENSKMAG00000009329	ptcd2	93	44.167	Kryptolebias_marmoratus
ENSHGLG00000001234	PTCD2	90	46.821	ENSLBEG00000024871	ptcd2	88	46.821	Labrus_bergylta
ENSHGLG00000001234	PTCD2	93	53.371	ENSLOCG00000011122	ptcd2	93	53.371	Lepisosteus_oculatus
ENSHGLG00000001234	PTCD2	81	76.527	ENSLAFG00000004115	PTCD2	100	76.527	Loxodonta_africana
ENSHGLG00000001234	PTCD2	100	75.457	ENSMFAG00000031516	PTCD2	99	75.457	Macaca_fascicularis
ENSHGLG00000001234	PTCD2	100	75.718	ENSMNEG00000007537	PTCD2	100	75.718	Macaca_nemestrina
ENSHGLG00000001234	PTCD2	100	75.457	ENSMLEG00000031093	PTCD2	99	75.457	Mandrillus_leucophaeus
ENSHGLG00000001234	PTCD2	99	46.966	ENSMAMG00000018529	ptcd2	97	46.966	Mastacembelus_armatus
ENSHGLG00000001234	PTCD2	91	45.115	ENSMZEG00005003625	ptcd2	89	45.115	Maylandia_zebra
ENSHGLG00000001234	PTCD2	91	49.138	ENSMGAG00000005033	PTCD2	100	49.138	Meleagris_gallopavo
ENSHGLG00000001234	PTCD2	100	55.091	ENSMAUG00000020253	Ptcd2	100	55.091	Mesocricetus_auratus
ENSHGLG00000001234	PTCD2	100	74.413	ENSMICG00000004535	PTCD2	99	74.413	Microcebus_murinus
ENSHGLG00000001234	PTCD2	100	72.846	ENSMOCG00000019985	Ptcd2	100	72.846	Microtus_ochrogaster
ENSHGLG00000001234	PTCD2	93	58.380	ENSMODG00000001695	PTCD2	93	58.380	Monodelphis_domestica
ENSHGLG00000001234	PTCD2	97	46.505	ENSMALG00000022372	ptcd2	94	46.505	Monopterus_albus
ENSHGLG00000001234	PTCD2	100	69.713	MGP_CAROLIEiJ_G0018829	Ptcd2	100	69.713	Mus_caroli
ENSHGLG00000001234	PTCD2	100	68.930	ENSMUSG00000021650	Ptcd2	100	68.930	Mus_musculus
ENSHGLG00000001234	PTCD2	100	72.324	MGP_PahariEiJ_G0015904	Ptcd2	100	72.324	Mus_pahari
ENSHGLG00000001234	PTCD2	100	69.452	MGP_SPRETEiJ_G0019711	Ptcd2	100	69.452	Mus_spretus
ENSHGLG00000001234	PTCD2	97	77.358	ENSMPUG00000014401	PTCD2	97	77.358	Mustela_putorius_furo
ENSHGLG00000001234	PTCD2	100	70.496	ENSMLUG00000007374	PTCD2	99	70.496	Myotis_lucifugus
ENSHGLG00000001234	PTCD2	100	72.585	ENSNGAG00000005027	Ptcd2	100	72.585	Nannospalax_galili
ENSHGLG00000001234	PTCD2	86	44.545	ENSNBRG00000000092	-	100	44.545	Neolamprologus_brichardi
ENSHGLG00000001234	PTCD2	91	45.402	ENSNBRG00000008174	ptcd2	91	45.402	Neolamprologus_brichardi
ENSHGLG00000001234	PTCD2	100	75.718	ENSNLEG00000004516	PTCD2	99	75.718	Nomascus_leucogenys
ENSHGLG00000001234	PTCD2	82	50.160	ENSMEUG00000014012	-	82	50.160	Notamacropus_eugenii
ENSHGLG00000001234	PTCD2	100	69.452	ENSOPRG00000007290	PTCD2	99	69.452	Ochotona_princeps
ENSHGLG00000001234	PTCD2	100	80.157	ENSODEG00000016417	PTCD2	100	80.157	Octodon_degus
ENSHGLG00000001234	PTCD2	75	46.713	ENSONIG00000011269	ptcd2	85	46.713	Oreochromis_niloticus
ENSHGLG00000001234	PTCD2	93	77.247	ENSOCUG00000007970	PTCD2	100	73.890	Oryctolagus_cuniculus
ENSHGLG00000001234	PTCD2	97	45.699	ENSORLG00000003851	ptcd2	92	45.699	Oryzias_latipes
ENSHGLG00000001234	PTCD2	97	44.892	ENSORLG00020009823	ptcd2	93	44.892	Oryzias_latipes_hni
ENSHGLG00000001234	PTCD2	91	46.286	ENSORLG00015016777	ptcd2	99	46.286	Oryzias_latipes_hsok
ENSHGLG00000001234	PTCD2	94	44.444	ENSOMEG00000012396	ptcd2	87	44.444	Oryzias_melastigma
ENSHGLG00000001234	PTCD2	100	71.059	ENSOGAG00000008390	PTCD2	99	71.059	Otolemur_garnettii
ENSHGLG00000001234	PTCD2	100	75.781	ENSOARG00000005087	PTCD2	99	75.781	Ovis_aries
ENSHGLG00000001234	PTCD2	100	75.718	ENSPPAG00000028480	PTCD2	99	75.718	Pan_paniscus
ENSHGLG00000001234	PTCD2	100	75.457	ENSPTRG00000016968	PTCD2	99	75.457	Pan_troglodytes
ENSHGLG00000001234	PTCD2	90	78.261	ENSPANG00000006611	PTCD2	89	78.261	Papio_anubis
ENSHGLG00000001234	PTCD2	93	48.045	ENSPKIG00000019896	ptcd2	93	48.045	Paramormyrops_kingsleyae
ENSHGLG00000001234	PTCD2	83	59.937	ENSPSIG00000014559	PTCD2	98	59.937	Pelodiscus_sinensis
ENSHGLG00000001234	PTCD2	100	73.247	ENSPEMG00000000884	Ptcd2	100	73.247	Peromyscus_maniculatus_bairdii
ENSHGLG00000001234	PTCD2	93	59.218	ENSPCIG00000029047	PTCD2	93	59.218	Phascolarctos_cinereus
ENSHGLG00000001234	PTCD2	90	43.478	ENSPLAG00000010456	ptcd2	95	42.473	Poecilia_latipinna
ENSHGLG00000001234	PTCD2	97	42.742	ENSPREG00000021797	ptcd2	92	42.742	Poecilia_reticulata
ENSHGLG00000001234	PTCD2	100	65.535	ENSPPYG00000015543	PTCD2	99	65.535	Pongo_abelii
ENSHGLG00000001234	PTCD2	81	64.856	ENSPCAG00000006806	PTCD2	98	64.856	Procavia_capensis
ENSHGLG00000001234	PTCD2	100	72.585	ENSPVAG00000010935	PTCD2	99	72.585	Pteropus_vampyrus
ENSHGLG00000001234	PTCD2	91	45.115	ENSPNYG00000003122	ptcd2	89	45.115	Pundamilia_nyererei
ENSHGLG00000001234	PTCD2	93	47.207	ENSPNAG00000021490	ptcd2	93	47.207	Pygocentrus_nattereri
ENSHGLG00000001234	PTCD2	100	72.324	ENSRNOG00000028403	Ptcd2	100	72.324	Rattus_norvegicus
ENSHGLG00000001234	PTCD2	100	70.757	ENSRBIG00000032929	PTCD2	99	70.757	Rhinopithecus_bieti
ENSHGLG00000001234	PTCD2	100	74.935	ENSRROG00000000080	PTCD2	100	74.935	Rhinopithecus_roxellana
ENSHGLG00000001234	PTCD2	100	74.674	ENSSBOG00000018911	PTCD2	100	74.674	Saimiri_boliviensis_boliviensis
ENSHGLG00000001234	PTCD2	93	60.504	ENSSHAG00000003833	PTCD2	92	60.504	Sarcophilus_harrisii
ENSHGLG00000001234	PTCD2	87	48.348	ENSSFOG00015015415	ptcd2	86	48.348	Scleropages_formosus
ENSHGLG00000001234	PTCD2	94	45.000	ENSSMAG00000010350	ptcd2	94	44.262	Scophthalmus_maximus
ENSHGLG00000001234	PTCD2	91	48.415	ENSSDUG00000008142	ptcd2	87	48.415	Seriola_dumerili
ENSHGLG00000001234	PTCD2	91	48.415	ENSSLDG00000015284	ptcd2	91	48.415	Seriola_lalandi_dorsalis
ENSHGLG00000001234	PTCD2	81	66.019	ENSSARG00000004983	PTCD2	99	66.019	Sorex_araneus
ENSHGLG00000001234	PTCD2	100	51.042	ENSSPUG00000000176	PTCD2	96	51.042	Sphenodon_punctatus
ENSHGLG00000001234	PTCD2	97	44.624	ENSSPAG00000008591	ptcd2	92	44.624	Stegastes_partitus
ENSHGLG00000001234	PTCD2	100	76.240	ENSSSCG00000016975	PTCD2	90	76.240	Sus_scrofa
ENSHGLG00000001234	PTCD2	89	50.588	ENSTGUG00000005705	PTCD2	98	50.588	Taeniopygia_guttata
ENSHGLG00000001234	PTCD2	100	72.063	ENSTBEG00000016559	PTCD2	99	72.063	Tupaia_belangeri
ENSHGLG00000001234	PTCD2	100	74.479	ENSTTRG00000011851	PTCD2	99	74.479	Tursiops_truncatus
ENSHGLG00000001234	PTCD2	97	76.011	ENSUAMG00000007583	PTCD2	87	76.011	Ursus_americanus
ENSHGLG00000001234	PTCD2	97	75.741	ENSUMAG00000007666	PTCD2	97	75.741	Ursus_maritimus
ENSHGLG00000001234	PTCD2	100	74.219	ENSVPAG00000009597	PTCD2	99	74.219	Vicugna_pacos
ENSHGLG00000001234	PTCD2	100	71.279	ENSVVUG00000007299	-	100	71.279	Vulpes_vulpes
ENSHGLG00000001234	PTCD2	91	52.137	ENSXETG00000031652	PTCD2	92	52.137	Xenopus_tropicalis
ENSHGLG00000001234	PTCD2	90	43.188	ENSXMAG00000005940	ptcd2	86	42.204	Xiphophorus_maculatus