EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000001316 (Gene tree)
Gene ID: -
Gene Symbol: GATB
Alias: PET112|PET112L
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 87462 bases
Position: chrJH602171.1:3121443-3208904
Accession: 101715571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000001730	GatB_Yqey	PF02637.18	1.6e-40	1	1
ENSHGLP00000001729	GatB_Yqey	PF02637.18	1.7e-40	1	1
ENSHGLP00000001731	GatB_Yqey	PF02637.18	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000001776	GATB-203	1419	-	ENSHGLP00000001731	472 (aa)	-	-
ENSHGLT00000001774	GATB-201	3842	XM_004869177	ENSHGLP00000001729	556 (aa)	XP_004869234	UPI00034FA807
ENSHGLT00000001775	GATB-202	1706	XM_013067223	ENSHGLP00000001730	541 (aa)	XP_012922677	UPI0006574D27

Gene Model

Click here to download ENSHGLG00000001316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000001316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000001316	GATB	100	86.229	ENSG00000059691	GATB	96	88.235	Homo_sapiens
ENSHGLG00000001316	GATB	90	70.093	ENSAPOG00000022676	gatb	93	65.039	Acanthochromis_polyacanthus
ENSHGLG00000001316	GATB	100	83.158	ENSAMEG00000018434	GATB	99	82.194	Ailuropoda_melanoleuca
ENSHGLG00000001316	GATB	75	70.538	ENSACIG00000015827	gatb	100	65.217	Amphilophus_citrinellus
ENSHGLG00000001316	GATB	87	71.429	ENSAOCG00000009635	gatb	95	65.996	Amphiprion_ocellaris
ENSHGLG00000001316	GATB	87	68.281	ENSAPEG00000023666	gatb	94	64.286	Amphiprion_percula
ENSHGLG00000001316	GATB	87	71.046	ENSATEG00000011821	gatb	93	68.182	Anabas_testudineus
ENSHGLG00000001316	GATB	87	77.805	ENSAPLG00000003933	GATB	99	73.931	Anas_platyrhynchos
ENSHGLG00000001316	GATB	99	69.620	ENSACAG00000002772	GATB	100	66.607	Anolis_carolinensis
ENSHGLG00000001316	GATB	100	85.381	ENSANAG00000020953	GATB	99	84.629	Aotus_nancymaae
ENSHGLG00000001316	GATB	78	70.081	ENSACLG00000026091	gatb	92	64.770	Astatotilapia_calliptera
ENSHGLG00000001316	GATB	89	61.323	ENSAMXG00000021662	gatb	89	60.922	Astyanax_mexicanus
ENSHGLG00000001316	GATB	100	83.686	ENSBTAG00000013914	GATB	99	82.098	Bos_taurus
ENSHGLG00000001316	GATB	100	85.805	ENSCJAG00000002147	GATB	99	84.991	Callithrix_jacchus
ENSHGLG00000001316	GATB	100	83.051	ENSCAFG00000008088	GATB	99	82.098	Canis_familiaris
ENSHGLG00000001316	GATB	100	82.627	ENSCAFG00020026686	GATB	98	82.803	Canis_lupus_dingo
ENSHGLG00000001316	GATB	100	83.263	ENSCHIG00000020111	GATB	99	81.736	Capra_hircus
ENSHGLG00000001316	GATB	100	88.771	ENSTSYG00000009976	GATB	99	86.799	Carlito_syrichta
ENSHGLG00000001316	GATB	100	77.158	ENSCAPG00000010977	GATB	100	77.158	Cavia_aperea
ENSHGLG00000001316	GATB	100	88.771	ENSCPOG00000005023	GATB	100	87.770	Cavia_porcellus
ENSHGLG00000001316	GATB	99	84.681	ENSCCAG00000021445	GATB	95	84.713	Cebus_capucinus
ENSHGLG00000001316	GATB	100	86.441	ENSCATG00000034281	GATB	99	85.353	Cercocebus_atys
ENSHGLG00000001316	GATB	100	90.042	ENSCLAG00000005772	GATB	100	89.388	Chinchilla_lanigera
ENSHGLG00000001316	GATB	100	86.229	ENSCSAG00000003318	GATB	99	84.810	Chlorocebus_sabaeus
ENSHGLG00000001316	GATB	100	82.203	ENSCHOG00000008476	GATB	99	80.108	Choloepus_hoffmanni
ENSHGLG00000001316	GATB	99	69.831	ENSCPBG00000025824	GATB	99	68.223	Chrysemys_picta_bellii
ENSHGLG00000001316	GATB	100	86.229	ENSCANG00000029227	GATB	99	84.629	Colobus_angolensis_palliatus
ENSHGLG00000001316	GATB	100	83.686	ENSCGRG00001024051	GATB	99	83.864	Cricetulus_griseus_chok1gshd
ENSHGLG00000001316	GATB	100	83.686	ENSCGRG00000012974	GATB	99	83.864	Cricetulus_griseus_crigri
ENSHGLG00000001316	GATB	89	69.718	ENSCSEG00000004009	gatb	100	61.556	Cynoglossus_semilaevis
ENSHGLG00000001316	GATB	87	70.944	ENSCVAG00000017180	gatb	99	65.795	Cyprinodon_variegatus
ENSHGLG00000001316	GATB	87	71.602	ENSDARG00000037309	gatb	89	65.789	Danio_rerio
ENSHGLG00000001316	GATB	100	82.068	ENSDNOG00000012683	GATB	99	81.261	Dasypus_novemcinctus
ENSHGLG00000001316	GATB	100	84.567	ENSDORG00000010241	Gatb	99	84.353	Dipodomys_ordii
ENSHGLG00000001316	GATB	87	49.757	FBgn0039153	GatB	95	45.142	Drosophila_melanogaster
ENSHGLG00000001316	GATB	99	60.940	ENSETEG00000002356	GATB	99	60.940	Echinops_telfairi
ENSHGLG00000001316	GATB	100	84.958	ENSEASG00005015868	GATB	99	84.087	Equus_asinus_asinus
ENSHGLG00000001316	GATB	100	83.051	ENSECAG00000003539	GATB	99	82.459	Equus_caballus
ENSHGLG00000001316	GATB	85	71.026	ENSEEUG00000002311	GATB	85	71.026	Erinaceus_europaeus
ENSHGLG00000001316	GATB	89	69.575	ENSELUG00000013584	gatb	96	65.121	Esox_lucius
ENSHGLG00000001316	GATB	100	84.110	ENSFCAG00000003207	GATB	99	82.640	Felis_catus
ENSHGLG00000001316	GATB	76	74.515	ENSFALG00000002209	GATB	99	69.595	Ficedula_albicollis
ENSHGLG00000001316	GATB	100	91.737	ENSFDAG00000006426	GATB	99	91.915	Fukomys_damarensis
ENSHGLG00000001316	GATB	89	68.545	ENSFHEG00000008643	GATB	93	63.333	Fundulus_heteroclitus
ENSHGLG00000001316	GATB	86	71.182	ENSGMOG00000001575	gatb	100	65.244	Gadus_morhua
ENSHGLG00000001316	GATB	87	75.610	ENSGALG00000010097	GATB	90	73.116	Gallus_gallus
ENSHGLG00000001316	GATB	89	70.047	ENSGAFG00000014422	gatb	94	63.786	Gambusia_affinis
ENSHGLG00000001316	GATB	86	70.343	ENSGACG00000017143	gatb	99	65.644	Gasterosteus_aculeatus
ENSHGLG00000001316	GATB	99	70.253	ENSGAGG00000007826	GATB	99	68.223	Gopherus_agassizii
ENSHGLG00000001316	GATB	100	86.441	ENSGGOG00000011099	GATB	99	85.172	Gorilla_gorilla
ENSHGLG00000001316	GATB	89	71.190	ENSHBUG00000009656	gatb	90	67.071	Haplochromis_burtoni
ENSHGLG00000001316	GATB	100	99.460	ENSHGLG00100004289	GATB	100	99.460	Heterocephalus_glaber_male
ENSHGLG00000001316	GATB	87	68.689	ENSHCOG00000006270	gatb	90	64.386	Hippocampus_comes
ENSHGLG00000001316	GATB	87	68.932	ENSIPUG00000013560	gatb	90	64.113	Ictalurus_punctatus
ENSHGLG00000001316	GATB	100	85.593	ENSSTOG00000005689	GATB	99	84.448	Ictidomys_tridecemlineatus
ENSHGLG00000001316	GATB	100	83.686	ENSJJAG00000016979	Gatb	99	83.830	Jaculus_jaculus
ENSHGLG00000001316	GATB	89	71.127	ENSKMAG00000004727	gatb	93	65.455	Kryptolebias_marmoratus
ENSHGLG00000001316	GATB	89	70.657	ENSLBEG00000019511	gatb	93	65.686	Labrus_bergylta
ENSHGLG00000001316	GATB	87	65.526	ENSLACG00000004352	GATB	97	63.158	Latimeria_chalumnae
ENSHGLG00000001316	GATB	89	62.708	ENSLOCG00000008564	gatb	91	59.208	Lepisosteus_oculatus
ENSHGLG00000001316	GATB	100	83.263	ENSLAFG00000022607	GATB	100	82.406	Loxodonta_africana
ENSHGLG00000001316	GATB	100	86.229	ENSMMUG00000011048	GATB	99	84.991	Macaca_mulatta
ENSHGLG00000001316	GATB	100	86.229	ENSMNEG00000040147	GATB	99	84.991	Macaca_nemestrina
ENSHGLG00000001316	GATB	100	86.229	ENSMLEG00000042135	GATB	99	84.991	Mandrillus_leucophaeus
ENSHGLG00000001316	GATB	92	69.885	ENSMAMG00000013256	gatb	94	64.547	Mastacembelus_armatus
ENSHGLG00000001316	GATB	89	71.190	ENSMZEG00005008495	gatb	92	66.468	Maylandia_zebra
ENSHGLG00000001316	GATB	87	77.073	ENSMGAG00000004276	GATB	97	74.338	Meleagris_gallopavo
ENSHGLG00000001316	GATB	100	84.746	ENSMAUG00000019099	Gatb	99	84.926	Mesocricetus_auratus
ENSHGLG00000001316	GATB	100	85.169	ENSMICG00000004311	GATB	98	84.810	Microcebus_murinus
ENSHGLG00000001316	GATB	100	84.322	ENSMOCG00000017566	Gatb	99	84.468	Microtus_ochrogaster
ENSHGLG00000001316	GATB	94	57.336	ENSMMOG00000005376	gatb	91	54.459	Mola_mola
ENSHGLG00000001316	GATB	100	75.738	ENSMODG00000001031	GATB	99	72.973	Monodelphis_domestica
ENSHGLG00000001316	GATB	89	70.686	ENSMALG00000003418	gatb	92	67.728	Monopterus_albus
ENSHGLG00000001316	GATB	100	83.686	MGP_CAROLIEiJ_G0025120	Gatb	99	83.864	Mus_caroli
ENSHGLG00000001316	GATB	100	84.322	ENSMUSG00000028085	Gatb	99	84.501	Mus_musculus
ENSHGLG00000001316	GATB	100	84.110	MGP_PahariEiJ_G0026563	Gatb	99	84.289	Mus_pahari
ENSHGLG00000001316	GATB	100	83.898	MGP_SPRETEiJ_G0026062	Gatb	99	82.640	Mus_spretus
ENSHGLG00000001316	GATB	100	83.051	ENSMPUG00000007394	GATB	99	81.917	Mustela_putorius_furo
ENSHGLG00000001316	GATB	100	84.746	ENSMLUG00000008194	GATB	99	84.448	Myotis_lucifugus
ENSHGLG00000001316	GATB	100	85.593	ENSNGAG00000002152	Gatb	99	85.745	Nannospalax_galili
ENSHGLG00000001316	GATB	75	70.538	ENSNBRG00000005947	gatb	100	64.920	Neolamprologus_brichardi
ENSHGLG00000001316	GATB	100	86.229	ENSNLEG00000005836	GATB	99	84.991	Nomascus_leucogenys
ENSHGLG00000001316	GATB	87	80.097	ENSMEUG00000001479	GATB	99	76.626	Notamacropus_eugenii
ENSHGLG00000001316	GATB	100	81.780	ENSOPRG00000011496	GATB	99	80.832	Ochotona_princeps
ENSHGLG00000001316	GATB	100	88.559	ENSODEG00000005429	GATB	99	88.723	Octodon_degus
ENSHGLG00000001316	GATB	94	68.834	ENSONIG00000010059	gatb	96	64.528	Oreochromis_niloticus
ENSHGLG00000001316	GATB	75	79.545	ENSOANG00000005282	GATB	99	75.058	Ornithorhynchus_anatinus
ENSHGLG00000001316	GATB	100	81.356	ENSOCUG00000016875	GATB	99	80.108	Oryctolagus_cuniculus
ENSHGLG00000001316	GATB	87	69.492	ENSORLG00000007740	gatb	99	65.517	Oryzias_latipes
ENSHGLG00000001316	GATB	90	69.647	ENSORLG00020016385	gatb	93	65.294	Oryzias_latipes_hni
ENSHGLG00000001316	GATB	90	68.531	ENSOMEG00000003089	gatb	93	64.258	Oryzias_melastigma
ENSHGLG00000001316	GATB	100	83.686	ENSOGAG00000014181	GATB	100	82.765	Otolemur_garnettii
ENSHGLG00000001316	GATB	100	83.475	ENSOARG00000004355	GATB	99	81.295	Ovis_aries
ENSHGLG00000001316	GATB	100	86.441	ENSPPAG00000041690	GATB	99	84.991	Pan_paniscus
ENSHGLG00000001316	GATB	100	83.475	ENSPPRG00000004993	GATB	99	81.917	Panthera_pardus
ENSHGLG00000001316	GATB	100	83.898	ENSPTIG00000021433	GATB	99	82.640	Panthera_tigris_altaica
ENSHGLG00000001316	GATB	100	82.030	ENSPTRG00000016513	GATB	99	81.227	Pan_troglodytes
ENSHGLG00000001316	GATB	100	83.475	ENSPANG00000024036	GATB	99	82.640	Papio_anubis
ENSHGLG00000001316	GATB	89	70.476	ENSPKIG00000017076	gatb	96	66.734	Paramormyrops_kingsleyae
ENSHGLG00000001316	GATB	95	71.145	ENSPSIG00000017832	GATB	98	69.088	Pelodiscus_sinensis
ENSHGLG00000001316	GATB	87	60.048	ENSPMGG00000016497	gatb	89	57.026	Periophthalmus_magnuspinnatus
ENSHGLG00000001316	GATB	100	83.686	ENSPEMG00000011096	Gatb	99	83.864	Peromyscus_maniculatus_bairdii
ENSHGLG00000001316	GATB	100	76.483	ENSPCIG00000015213	GATB	99	73.418	Phascolarctos_cinereus
ENSHGLG00000001316	GATB	89	70.023	ENSPFOG00000009933	gatb	93	65.166	Poecilia_formosa
ENSHGLG00000001316	GATB	89	70.755	ENSPLAG00000015569	gatb	93	65.748	Poecilia_latipinna
ENSHGLG00000001316	GATB	89	70.047	ENSPMEG00000006100	gatb	94	64.082	Poecilia_mexicana
ENSHGLG00000001316	GATB	89	69.811	ENSPREG00000000128	gatb	93	64.961	Poecilia_reticulata
ENSHGLG00000001316	GATB	100	86.229	ENSPPYG00000015121	GATB	99	84.810	Pongo_abelii
ENSHGLG00000001316	GATB	99	63.472	ENSPCAG00000005950	GATB	99	63.472	Procavia_capensis
ENSHGLG00000001316	GATB	97	86.842	ENSPCOG00000021777	GATB	98	86.034	Propithecus_coquereli
ENSHGLG00000001316	GATB	100	83.263	ENSPVAG00000006891	GATB	99	83.183	Pteropus_vampyrus
ENSHGLG00000001316	GATB	89	71.190	ENSPNYG00000013884	gatb	92	66.468	Pundamilia_nyererei
ENSHGLG00000001316	GATB	86	69.193	ENSPNAG00000020150	gatb	89	64.097	Pygocentrus_nattereri
ENSHGLG00000001316	GATB	100	83.051	ENSRNOG00000037655	Gatb	99	81.736	Rattus_norvegicus
ENSHGLG00000001316	GATB	100	86.229	ENSRBIG00000006453	GATB	99	84.810	Rhinopithecus_bieti
ENSHGLG00000001316	GATB	100	86.229	ENSRROG00000041575	GATB	99	84.810	Rhinopithecus_roxellana
ENSHGLG00000001316	GATB	86	31.797	YBL080C	-	69	32.242	Saccharomyces_cerevisiae
ENSHGLG00000001316	GATB	100	85.169	ENSSBOG00000022495	GATB	99	84.087	Saimiri_boliviensis_boliviensis
ENSHGLG00000001316	GATB	100	74.841	ENSSHAG00000011763	GATB	99	72.383	Sarcophilus_harrisii
ENSHGLG00000001316	GATB	88	72.155	ENSSFOG00015015565	gatb	90	68.008	Scleropages_formosus
ENSHGLG00000001316	GATB	88	70.264	ENSSMAG00000003609	gatb	70	64.870	Scophthalmus_maximus
ENSHGLG00000001316	GATB	89	70.892	ENSSDUG00000019847	gatb	92	65.680	Seriola_dumerili
ENSHGLG00000001316	GATB	90	70.588	ENSSLDG00000010253	gatb	96	65.613	Seriola_lalandi_dorsalis
ENSHGLG00000001316	GATB	75	71.084	ENSSARG00000003212	GATB	75	71.084	Sorex_araneus
ENSHGLG00000001316	GATB	86	74.510	ENSSPUG00000014453	GATB	95	71.283	Sphenodon_punctatus
ENSHGLG00000001316	GATB	87	71.671	ENSSPAG00000014465	gatb	99	66.801	Stegastes_partitus
ENSHGLG00000001316	GATB	100	81.780	ENSSSCG00000009015	GATB	100	81.465	Sus_scrofa
ENSHGLG00000001316	GATB	87	77.805	ENSTGUG00000004986	GATB	99	73.523	Taeniopygia_guttata
ENSHGLG00000001316	GATB	90	60.765	ENSTRUG00000015238	gatb	93	60.765	Takifugu_rubripes
ENSHGLG00000001316	GATB	69	64.832	ENSTNIG00000003378	gatb	99	60.784	Tetraodon_nigroviridis
ENSHGLG00000001316	GATB	88	62.802	ENSTBEG00000009804	GATB	88	62.759	Tupaia_belangeri
ENSHGLG00000001316	GATB	100	83.051	ENSTTRG00000010679	GATB	99	81.917	Tursiops_truncatus
ENSHGLG00000001316	GATB	100	84.110	ENSUAMG00000021441	GATB	99	82.640	Ursus_americanus
ENSHGLG00000001316	GATB	100	84.110	ENSUMAG00000016157	GATB	99	82.640	Ursus_maritimus
ENSHGLG00000001316	GATB	80	75.224	ENSVPAG00000010844	GATB	80	75.224	Vicugna_pacos
ENSHGLG00000001316	GATB	100	83.686	ENSVVUG00000025083	GATB	99	82.640	Vulpes_vulpes
ENSHGLG00000001316	GATB	86	73.267	ENSXETG00000034167	GATB	98	68.699	Xenopus_tropicalis
ENSHGLG00000001316	GATB	89	70.047	ENSXMAG00000008071	gatb	92	76.829	Xiphophorus_maculatus