EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000001905 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 1538 bases
Position: chrJH602148.1:4955044-4956581
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000002525	SMN	PF06003.12	8.6e-100	1	1
ENSHGLP00000002526	SMN	PF06003.12	9.2e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000002578	-	867	-	ENSHGLP00000002526	288 (aa)	-	-
ENSHGLT00000002577	-	849	-	ENSHGLP00000002525	282 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000001905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000001905's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000001905	-	100	88.514	ENSHGLG00000001018	-	100	88.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000001905	-	99	78.425	ENSG00000172062	SMN1	99	78.425	Homo_sapiens
ENSHGLG00000001905	-	99	78.425	ENSG00000205571	SMN2	99	78.425	Homo_sapiens
ENSHGLG00000001905	-	94	51.825	ENSAPOG00000011324	smn1	94	50.000	Acanthochromis_polyacanthus
ENSHGLG00000001905	-	98	81.720	ENSAMEG00000003316	-	96	80.137	Ailuropoda_melanoleuca
ENSHGLG00000001905	-	90	45.818	ENSACIG00000019772	-	97	45.420	Amphilophus_citrinellus
ENSHGLG00000001905	-	94	46.309	ENSAOCG00000024444	smn1	94	48.188	Amphiprion_ocellaris
ENSHGLG00000001905	-	94	48.789	ENSAPEG00000016504	smn1	94	48.913	Amphiprion_percula
ENSHGLG00000001905	-	90	50.558	ENSATEG00000002182	smn1	80	48.699	Anabas_testudineus
ENSHGLG00000001905	-	70	55.051	ENSAPLG00000010912	-	97	55.051	Anas_platyrhynchos
ENSHGLG00000001905	-	95	52.899	ENSACAG00000010017	-	95	55.957	Anolis_carolinensis
ENSHGLG00000001905	-	99	76.573	ENSANAG00000032133	-	99	75.510	Aotus_nancymaae
ENSHGLG00000001905	-	94	47.080	ENSACLG00000007308	smn1	88	49.064	Astatotilapia_calliptera
ENSHGLG00000001905	-	98	77.500	ENSBTAG00000005743	SMN2	99	77.193	Bos_taurus
ENSHGLG00000001905	-	99	77.816	ENSCJAG00000016290	-	99	77.816	Callithrix_jacchus
ENSHGLG00000001905	-	98	80.645	ENSCAFG00000007812	SMN	100	79.110	Canis_familiaris
ENSHGLG00000001905	-	97	80.576	ENSCAFG00020019229	-	93	79.038	Canis_lupus_dingo
ENSHGLG00000001905	-	98	77.305	ENSCHIG00000015559	-	99	75.593	Capra_hircus
ENSHGLG00000001905	-	99	80.634	ENSTSYG00000012058	-	99	80.634	Carlito_syrichta
ENSHGLG00000001905	-	77	72.811	ENSCAPG00000011021	-	96	74.771	Cavia_aperea
ENSHGLG00000001905	-	99	83.448	ENSCPOG00000012328	-	100	83.446	Cavia_porcellus
ENSHGLG00000001905	-	100	84.483	ENSCPOG00000036973	-	100	84.483	Cavia_porcellus
ENSHGLG00000001905	-	99	77.663	ENSCCAG00000018127	-	99	77.663	Cebus_capucinus
ENSHGLG00000001905	-	99	78.767	ENSCATG00000037002	-	99	78.767	Cercocebus_atys
ENSHGLG00000001905	-	100	80.743	ENSCLAG00000000284	-	100	80.405	Chinchilla_lanigera
ENSHGLG00000001905	-	99	79.452	ENSCSAG00000015688	-	99	79.452	Chlorocebus_sabaeus
ENSHGLG00000001905	-	87	69.444	ENSCHOG00000007346	-	100	66.412	Choloepus_hoffmanni
ENSHGLG00000001905	-	94	59.707	ENSCPBG00000010968	-	96	60.687	Chrysemys_picta_bellii
ENSHGLG00000001905	-	99	80.000	ENSCANG00000038242	-	100	79.422	Colobus_angolensis_palliatus
ENSHGLG00000001905	-	95	73.310	ENSCANG00000033324	-	95	74.377	Colobus_angolensis_palliatus
ENSHGLG00000001905	-	100	59.028	ENSCGRG00001016998	-	100	59.375	Cricetulus_griseus_chok1gshd
ENSHGLG00000001905	-	100	75.768	ENSCGRG00001017959	-	100	75.768	Cricetulus_griseus_chok1gshd
ENSHGLG00000001905	-	100	75.768	ENSCGRG00000007698	Smn1	100	75.768	Cricetulus_griseus_crigri
ENSHGLG00000001905	-	94	46.831	ENSCSEG00000015227	smn1	97	47.312	Cynoglossus_semilaevis
ENSHGLG00000001905	-	94	49.466	ENSCVAG00000007498	smn1	95	47.842	Cyprinodon_variegatus
ENSHGLG00000001905	-	95	50.538	ENSDARG00000018494	smn1	96	51.748	Danio_rerio
ENSHGLG00000001905	-	84	80.000	ENSDNOG00000007283	-	100	80.000	Dasypus_novemcinctus
ENSHGLG00000001905	-	78	68.778	ENSDNOG00000045949	-	100	67.672	Dasypus_novemcinctus
ENSHGLG00000001905	-	100	70.890	ENSDORG00000007082	Smn1	99	70.890	Dipodomys_ordii
ENSHGLG00000001905	-	72	65.238	ENSETEG00000001406	-	100	65.238	Echinops_telfairi
ENSHGLG00000001905	-	95	38.436	ENSEBUG00000011902	smn1	98	39.465	Eptatretus_burgeri
ENSHGLG00000001905	-	90	73.764	ENSEASG00005018000	-	96	71.739	Equus_asinus_asinus
ENSHGLG00000001905	-	98	79.359	ENSECAG00000015215	-	100	78.231	Equus_caballus
ENSHGLG00000001905	-	87	73.092	ENSEEUG00000015777	-	100	73.092	Erinaceus_europaeus
ENSHGLG00000001905	-	93	51.071	ENSELUG00000018067	smn1	94	50.178	Esox_lucius
ENSHGLG00000001905	-	100	78.472	ENSFCAG00000028292	SMN	100	77.816	Felis_catus
ENSHGLG00000001905	-	92	56.343	ENSFALG00000012320	-	94	56.343	Ficedula_albicollis
ENSHGLG00000001905	-	100	86.486	ENSFDAG00000017683	-	100	86.486	Fukomys_damarensis
ENSHGLG00000001905	-	97	47.842	ENSGMOG00000017279	smn1	95	47.842	Gadus_morhua
ENSHGLG00000001905	-	94	55.762	ENSGALG00000002430	SMN	95	55.019	Gallus_gallus
ENSHGLG00000001905	-	94	50.735	ENSGAFG00000009501	smn1	94	46.468	Gambusia_affinis
ENSHGLG00000001905	-	94	49.071	ENSGACG00000010584	smn1	96	45.263	Gasterosteus_aculeatus
ENSHGLG00000001905	-	94	58.974	ENSGAGG00000011374	-	94	60.073	Gopherus_agassizii
ENSHGLG00000001905	-	67	76.923	ENSGGOG00000026704	-	99	75.587	Gorilla_gorilla
ENSHGLG00000001905	-	98	65.385	ENSGGOG00000003872	-	100	69.203	Gorilla_gorilla
ENSHGLG00000001905	-	94	48.327	ENSHBUG00000013987	smn1	94	49.446	Haplochromis_burtoni
ENSHGLG00000001905	-	100	88.514	ENSHGLG00100011252	-	100	88.514	Heterocephalus_glaber_male
ENSHGLG00000001905	-	96	100.000	ENSHGLG00100018676	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000001905	-	90	44.853	ENSHCOG00000017136	smn1	87	47.566	Hippocampus_comes
ENSHGLG00000001905	-	95	49.825	ENSIPUG00000012580	smn1	86	50.350	Ictalurus_punctatus
ENSHGLG00000001905	-	95	79.422	ENSSTOG00000012288	-	100	79.422	Ictidomys_tridecemlineatus
ENSHGLG00000001905	-	61	60.819	ENSJJAG00000014853	-	100	60.638	Jaculus_jaculus
ENSHGLG00000001905	-	94	48.399	ENSKMAG00000007239	smn1	96	47.710	Kryptolebias_marmoratus
ENSHGLG00000001905	-	94	50.357	ENSLBEG00000022550	smn1	94	48.000	Labrus_bergylta
ENSHGLG00000001905	-	96	34.602	ENSLACG00000009808	-	92	36.585	Latimeria_chalumnae
ENSHGLG00000001905	-	93	51.292	ENSLOCG00000011339	smn1	94	52.158	Lepisosteus_oculatus
ENSHGLG00000001905	-	87	33.721	ENSLOCG00000000801	-	84	30.182	Lepisosteus_oculatus
ENSHGLG00000001905	-	100	77.966	ENSLAFG00000003425	-	96	77.966	Loxodonta_africana
ENSHGLG00000001905	-	99	74.658	ENSMFAG00000008812	-	99	74.658	Macaca_fascicularis
ENSHGLG00000001905	-	99	79.452	ENSMFAG00000031523	SMN1	99	79.452	Macaca_fascicularis
ENSHGLG00000001905	-	99	79.452	ENSMMUG00000020214	SMN1	99	79.452	Macaca_mulatta
ENSHGLG00000001905	-	99	73.973	ENSMMUG00000030594	-	99	73.973	Macaca_mulatta
ENSHGLG00000001905	-	77	67.421	ENSMNEG00000036423	-	86	67.421	Macaca_nemestrina
ENSHGLG00000001905	-	99	79.110	ENSMNEG00000035094	-	99	79.110	Macaca_nemestrina
ENSHGLG00000001905	-	99	79.452	ENSMLEG00000041902	-	99	79.452	Mandrillus_leucophaeus
ENSHGLG00000001905	-	94	48.201	ENSMAMG00000011034	smn1	94	47.826	Mastacembelus_armatus
ENSHGLG00000001905	-	94	47.143	ENSMZEG00005013634	smn1	94	48.929	Maylandia_zebra
ENSHGLG00000001905	-	70	54.082	ENSMGAG00000008889	-	95	53.061	Meleagris_gallopavo
ENSHGLG00000001905	-	100	74.403	ENSMAUG00000010262	Smn1	100	74.403	Mesocricetus_auratus
ENSHGLG00000001905	-	100	66.441	ENSMICG00000034708	-	100	74.725	Microcebus_murinus
ENSHGLG00000001905	-	100	74.403	ENSMOCG00000017833	Smn1	100	74.403	Microtus_ochrogaster
ENSHGLG00000001905	-	94	44.000	ENSMMOG00000005504	smn1	96	45.620	Mola_mola
ENSHGLG00000001905	-	100	63.763	ENSMODG00000001436	-	98	63.763	Monodelphis_domestica
ENSHGLG00000001905	-	93	47.653	ENSMALG00000008025	smn1	94	48.000	Monopterus_albus
ENSHGLG00000001905	-	100	75.170	MGP_CAROLIEiJ_G0018836	Smn1	100	75.170	Mus_caroli
ENSHGLG00000001905	-	100	74.490	ENSMUSG00000021645	Smn1	100	74.830	Mus_musculus
ENSHGLG00000001905	-	100	72.945	MGP_PahariEiJ_G0015911	Smn1	100	73.288	Mus_pahari
ENSHGLG00000001905	-	100	74.150	MGP_SPRETEiJ_G0019718	Smn1	100	74.490	Mus_spretus
ENSHGLG00000001905	-	95	80.935	ENSMPUG00000014470	-	98	80.935	Mustela_putorius_furo
ENSHGLG00000001905	-	98	78.397	ENSMLUG00000010603	-	96	76.667	Myotis_lucifugus
ENSHGLG00000001905	-	99	76.842	ENSNGAG00000019833	Smn1	98	76.842	Nannospalax_galili
ENSHGLG00000001905	-	94	45.520	ENSNBRG00000023000	smn1	94	48.410	Neolamprologus_brichardi
ENSHGLG00000001905	-	99	78.873	ENSNLEG00000004454	-	99	78.082	Nomascus_leucogenys
ENSHGLG00000001905	-	78	60.000	ENSMEUG00000011393	-	99	62.555	Notamacropus_eugenii
ENSHGLG00000001905	-	87	75.099	ENSOPRG00000002015	-	100	77.075	Ochotona_princeps
ENSHGLG00000001905	-	94	84.982	ENSODEG00000015976	-	97	84.982	Octodon_degus
ENSHGLG00000001905	-	94	44.840	ENSONIG00000011799	smn1	95	48.014	Oreochromis_niloticus
ENSHGLG00000001905	-	95	61.314	ENSOANG00000001626	-	96	62.950	Ornithorhynchus_anatinus
ENSHGLG00000001905	-	99	75.000	ENSOCUG00000026649	-	99	76.109	Oryctolagus_cuniculus
ENSHGLG00000001905	-	99	70.345	ENSOCUG00000025183	-	100	70.169	Oryctolagus_cuniculus
ENSHGLG00000001905	-	99	78.873	ENSOCUG00000017097	-	100	77.320	Oryctolagus_cuniculus
ENSHGLG00000001905	-	94	46.863	ENSORLG00000010552	smn1	94	47.619	Oryzias_latipes
ENSHGLG00000001905	-	94	48.689	ENSORLG00020007936	smn1	94	47.037	Oryzias_latipes_hni
ENSHGLG00000001905	-	54	55.484	ENSORLG00015022425	smn1	94	47.080	Oryzias_latipes_hsok
ENSHGLG00000001905	-	94	45.985	ENSOMEG00000007824	smn1	94	48.175	Oryzias_melastigma
ENSHGLG00000001905	-	92	71.111	ENSOGAG00000031414	-	97	70.357	Otolemur_garnettii
ENSHGLG00000001905	-	96	76.000	ENSOARG00000005425	-	100	76.000	Ovis_aries
ENSHGLG00000001905	-	99	78.082	ENSPPAG00000036640	-	99	78.082	Pan_paniscus
ENSHGLG00000001905	-	100	78.819	ENSPPRG00000005575	-	100	78.157	Panthera_pardus
ENSHGLG00000001905	-	100	78.547	ENSPTIG00000007745	-	100	77.891	Panthera_tigris_altaica
ENSHGLG00000001905	-	99	77.627	ENSPTRG00000016955	-	99	77.627	Pan_troglodytes
ENSHGLG00000001905	-	98	73.702	ENSPANG00000000253	-	98	74.048	Papio_anubis
ENSHGLG00000001905	-	99	80.282	ENSPANG00000013601	-	99	79.452	Papio_anubis
ENSHGLG00000001905	-	93	48.000	ENSPKIG00000011096	smn1	94	49.091	Paramormyrops_kingsleyae
ENSHGLG00000001905	-	91	58.779	ENSPSIG00000014787	-	83	58.175	Pelodiscus_sinensis
ENSHGLG00000001905	-	94	45.185	ENSPMGG00000012285	smn1	94	44.074	Periophthalmus_magnuspinnatus
ENSHGLG00000001905	-	99	40.893	ENSPMAG00000005004	smn1	99	41.497	Petromyzon_marinus
ENSHGLG00000001905	-	100	64.685	ENSPCIG00000025764	-	99	65.614	Phascolarctos_cinereus
ENSHGLG00000001905	-	94	50.735	ENSPFOG00000007786	smn1	94	47.101	Poecilia_formosa
ENSHGLG00000001905	-	94	51.103	ENSPLAG00000012071	smn1	94	47.464	Poecilia_latipinna
ENSHGLG00000001905	-	94	50.735	ENSPMEG00000017085	smn1	94	47.101	Poecilia_mexicana
ENSHGLG00000001905	-	94	51.838	ENSPREG00000005824	smn1	94	47.985	Poecilia_reticulata
ENSHGLG00000001905	-	93	78.652	ENSPPYG00000015533	-	96	78.652	Pongo_abelii
ENSHGLG00000001905	-	87	49.597	ENSPPYG00000019189	-	99	50.000	Pongo_abelii
ENSHGLG00000001905	-	93	75.093	ENSPCAG00000004187	-	100	75.093	Procavia_capensis
ENSHGLG00000001905	-	91	63.019	ENSPCOG00000022307	-	100	66.415	Propithecus_coquereli
ENSHGLG00000001905	-	100	79.795	ENSPVAG00000005977	-	100	79.795	Pteropus_vampyrus
ENSHGLG00000001905	-	94	45.520	ENSPNYG00000014148	smn1	94	48.410	Pundamilia_nyererei
ENSHGLG00000001905	-	94	45.296	ENSPNAG00000014007	smn1	83	47.312	Pygocentrus_nattereri
ENSHGLG00000001905	-	100	74.490	ENSRNOG00000018067	Smn1	100	74.490	Rattus_norvegicus
ENSHGLG00000001905	-	99	79.452	ENSRBIG00000037052	-	99	79.452	Rhinopithecus_bieti
ENSHGLG00000001905	-	95	66.547	ENSRBIG00000036775	-	95	67.986	Rhinopithecus_bieti
ENSHGLG00000001905	-	99	79.452	ENSRROG00000039399	-	99	79.452	Rhinopithecus_roxellana
ENSHGLG00000001905	-	99	64.912	ENSRROG00000031088	-	99	65.529	Rhinopithecus_roxellana
ENSHGLG00000001905	-	99	78.547	ENSSBOG00000011665	-	99	78.547	Saimiri_boliviensis_boliviensis
ENSHGLG00000001905	-	84	72.800	ENSSBOG00000020112	-	87	72.800	Saimiri_boliviensis_boliviensis
ENSHGLG00000001905	-	100	65.035	ENSSHAG00000001499	-	97	66.667	Sarcophilus_harrisii
ENSHGLG00000001905	-	94	47.794	ENSSFOG00015015507	smn1	94	50.181	Scleropages_formosus
ENSHGLG00000001905	-	94	48.540	ENSSMAG00000007922	smn1	94	45.387	Scophthalmus_maximus
ENSHGLG00000001905	-	94	47.183	ENSSDUG00000018533	smn1	94	46.350	Seriola_dumerili
ENSHGLG00000001905	-	94	47.535	ENSSLDG00000021135	smn1	94	46.715	Seriola_lalandi_dorsalis
ENSHGLG00000001905	-	93	61.338	ENSSPUG00000000373	-	93	62.593	Sphenodon_punctatus
ENSHGLG00000001905	-	94	45.486	ENSSPAG00000004345	smn1	94	48.175	Stegastes_partitus
ENSHGLG00000001905	-	98	62.230	ENSSSCG00000029127	-	98	60.764	Sus_scrofa
ENSHGLG00000001905	-	100	78.840	ENSSSCG00000016970	-	100	78.840	Sus_scrofa
ENSHGLG00000001905	-	75	54.245	ENSSSCG00000033865	-	95	55.189	Sus_scrofa
ENSHGLG00000001905	-	94	56.159	ENSTGUG00000001548	-	99	55.636	Taeniopygia_guttata
ENSHGLG00000001905	-	51	54.000	ENSTRUG00000000736	smn	96	46.715	Takifugu_rubripes
ENSHGLG00000001905	-	94	42.361	ENSTNIG00000009892	smn1	95	43.929	Tetraodon_nigroviridis
ENSHGLG00000001905	-	64	79.235	ENSTBEG00000002399	-	100	77.143	Tupaia_belangeri
ENSHGLG00000001905	-	98	75.899	ENSTTRG00000005080	-	100	74.744	Tursiops_truncatus
ENSHGLG00000001905	-	63	79.670	ENSUAMG00000024947	-	76	77.619	Ursus_americanus
ENSHGLG00000001905	-	98	82.437	ENSUMAG00000007842	-	74	80.822	Ursus_maritimus
ENSHGLG00000001905	-	92	69.318	ENSVPAG00000009887	-	100	65.714	Vicugna_pacos
ENSHGLG00000001905	-	98	80.645	ENSVVUG00000006934	-	100	79.110	Vulpes_vulpes
ENSHGLG00000001905	-	94	54.513	ENSXETG00000018189	smn2	92	54.513	Xenopus_tropicalis
ENSHGLG00000001905	-	92	35.336	ENSXETG00000004912	-	78	66.667	Xenopus_tropicalis
ENSHGLG00000001905	-	94	51.095	ENSXMAG00000001521	smn1	95	46.863	Xiphophorus_maculatus