EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000001988 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 4912 bases
Position: chrJH602140.1:1196932-1201843
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000002640	LSM	PF01423.22	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000002693	-	210	-	ENSHGLP00000002640	69 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000001988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000001988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000001988	-	99	94.118	ENSHGLG00000019782	-	71	94.118
ENSHGLG00000001988	-	91	30.159	ENSHGLG00000004152	-	83	30.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000001988	-	99	100.000	ENSG00000128534	LSM8	100	100.000	Homo_sapiens
ENSHGLG00000001988	-	99	92.647	ENSAPOG00000008649	lsm8	71	92.647	Acanthochromis_polyacanthus
ENSHGLG00000001988	-	99	100.000	ENSAMEG00000001162	LSM8	71	100.000	Ailuropoda_melanoleuca
ENSHGLG00000001988	-	68	100.000	ENSACIG00000014694	lsm8	63	100.000	Amphilophus_citrinellus
ENSHGLG00000001988	-	99	92.647	ENSAOCG00000013926	lsm8	71	92.647	Amphiprion_ocellaris
ENSHGLG00000001988	-	99	92.647	ENSAPEG00000023502	lsm8	71	92.647	Amphiprion_percula
ENSHGLG00000001988	-	68	100.000	ENSATEG00000023432	lsm8	63	100.000	Anabas_testudineus
ENSHGLG00000001988	-	90	93.548	ENSAPLG00000005115	LSM8	63	93.548	Anas_platyrhynchos
ENSHGLG00000001988	-	99	100.000	ENSANAG00000027771	LSM8	71	100.000	Aotus_nancymaae
ENSHGLG00000001988	-	99	92.647	ENSACLG00000011253	lsm8	71	92.647	Astatotilapia_calliptera
ENSHGLG00000001988	-	99	94.118	ENSAMXG00000042902	lsm8	71	94.118	Astyanax_mexicanus
ENSHGLG00000001988	-	99	100.000	ENSBTAG00000012649	LSM8	71	100.000	Bos_taurus
ENSHGLG00000001988	-	99	60.294	WBGene00003082	lsm-8	69	60.294	Caenorhabditis_elegans
ENSHGLG00000001988	-	99	100.000	ENSCJAG00000046406	LSM8	71	100.000	Callithrix_jacchus
ENSHGLG00000001988	-	99	100.000	ENSCAFG00000016459	LSM8	69	100.000	Canis_familiaris
ENSHGLG00000001988	-	99	100.000	ENSCAFG00020012800	-	53	100.000	Canis_lupus_dingo
ENSHGLG00000001988	-	99	100.000	ENSCAFG00020007643	-	71	100.000	Canis_lupus_dingo
ENSHGLG00000001988	-	83	100.000	ENSCHIG00000014201	LSM8	61	100.000	Capra_hircus
ENSHGLG00000001988	-	99	100.000	ENSTSYG00000032434	LSM8	71	100.000	Carlito_syrichta
ENSHGLG00000001988	-	67	97.826	ENSCAPG00000008253	LSM8	62	97.826	Cavia_aperea
ENSHGLG00000001988	-	99	100.000	ENSCPOG00000035673	LSM8	71	100.000	Cavia_porcellus
ENSHGLG00000001988	-	99	100.000	ENSCCAG00000021329	LSM8	71	100.000	Cebus_capucinus
ENSHGLG00000001988	-	99	100.000	ENSCATG00000045302	LSM8	71	100.000	Cercocebus_atys
ENSHGLG00000001988	-	99	100.000	ENSCLAG00000003726	LSM8	71	100.000	Chinchilla_lanigera
ENSHGLG00000001988	-	99	95.588	ENSCSAG00000019007	-	71	95.588	Chlorocebus_sabaeus
ENSHGLG00000001988	-	99	100.000	ENSCSAG00000010802	-	71	100.000	Chlorocebus_sabaeus
ENSHGLG00000001988	-	83	100.000	ENSCPBG00000008154	LSM8	58	100.000	Chrysemys_picta_bellii
ENSHGLG00000001988	-	99	80.882	ENSCING00000024877	-	71	80.882	Ciona_intestinalis
ENSHGLG00000001988	-	99	100.000	ENSCANG00000040728	LSM8	71	100.000	Colobus_angolensis_palliatus
ENSHGLG00000001988	-	99	100.000	ENSCGRG00001000450	Lsm8	71	100.000	Cricetulus_griseus_chok1gshd
ENSHGLG00000001988	-	83	100.000	ENSCGRG00000005587	Lsm8	67	100.000	Cricetulus_griseus_crigri
ENSHGLG00000001988	-	99	77.941	ENSCSEG00000004164	lsm8	69	77.941	Cynoglossus_semilaevis
ENSHGLG00000001988	-	99	91.176	ENSCVAG00000020547	lsm8	71	91.176	Cyprinodon_variegatus
ENSHGLG00000001988	-	99	89.706	ENSDARG00000091656	lsm8	71	89.706	Danio_rerio
ENSHGLG00000001988	-	99	100.000	ENSDNOG00000034613	LSM8	71	100.000	Dasypus_novemcinctus
ENSHGLG00000001988	-	99	100.000	ENSDORG00000027868	Lsm8	71	100.000	Dipodomys_ordii
ENSHGLG00000001988	-	96	69.697	FBgn0035271	CG2021	69	69.697	Drosophila_melanogaster
ENSHGLG00000001988	-	99	100.000	ENSETEG00000011594	LSM8	71	100.000	Echinops_telfairi
ENSHGLG00000001988	-	67	95.652	ENSEBUG00000012017	lsm8	62	95.652	Eptatretus_burgeri
ENSHGLG00000001988	-	83	100.000	ENSECAG00000024025	LSM8	52	100.000	Equus_caballus
ENSHGLG00000001988	-	99	94.118	ENSELUG00000010138	lsm8	71	94.118	Esox_lucius
ENSHGLG00000001988	-	99	100.000	ENSFCAG00000036620	-	71	100.000	Felis_catus
ENSHGLG00000001988	-	90	70.968	ENSFCAG00000044794	-	61	70.968	Felis_catus
ENSHGLG00000001988	-	99	100.000	ENSFALG00000010023	LSM8	71	100.000	Ficedula_albicollis
ENSHGLG00000001988	-	99	100.000	ENSFDAG00000019530	LSM8	71	100.000	Fukomys_damarensis
ENSHGLG00000001988	-	99	92.647	ENSFHEG00000013729	lsm8	71	92.647	Fundulus_heteroclitus
ENSHGLG00000001988	-	99	100.000	ENSGALG00000009110	LSM8	71	100.000	Gallus_gallus
ENSHGLG00000001988	-	99	91.176	ENSGAFG00000001135	lsm8	71	91.176	Gambusia_affinis
ENSHGLG00000001988	-	99	100.000	ENSGAGG00000017366	LSM8	71	100.000	Gopherus_agassizii
ENSHGLG00000001988	-	99	100.000	ENSGGOG00000041883	LSM8	71	100.000	Gorilla_gorilla
ENSHGLG00000001988	-	99	92.647	ENSHBUG00000003646	lsm8	71	92.647	Haplochromis_burtoni
ENSHGLG00000001988	-	99	100.000	ENSHGLG00100003934	-	68	100.000	Heterocephalus_glaber_male
ENSHGLG00000001988	-	99	94.118	ENSHGLG00100012166	-	71	94.118	Heterocephalus_glaber_male
ENSHGLG00000001988	-	99	91.176	ENSHCOG00000005037	lsm8	71	91.176	Hippocampus_comes
ENSHGLG00000001988	-	99	94.118	ENSIPUG00000019811	NAA38	71	94.118	Ictalurus_punctatus
ENSHGLG00000001988	-	99	100.000	ENSSTOG00000009039	LSM8	71	100.000	Ictidomys_tridecemlineatus
ENSHGLG00000001988	-	87	86.667	ENSSTOG00000034801	-	56	86.667	Ictidomys_tridecemlineatus
ENSHGLG00000001988	-	99	100.000	ENSJJAG00000009031	Lsm8	70	100.000	Jaculus_jaculus
ENSHGLG00000001988	-	99	92.647	ENSKMAG00000018983	lsm8	71	92.647	Kryptolebias_marmoratus
ENSHGLG00000001988	-	99	95.588	ENSLACG00000010231	LSM8	71	95.588	Latimeria_chalumnae
ENSHGLG00000001988	-	99	92.647	ENSLOCG00000015580	lsm8	71	92.647	Lepisosteus_oculatus
ENSHGLG00000001988	-	99	98.551	ENSLAFG00000011242	LSM8	71	98.551	Loxodonta_africana
ENSHGLG00000001988	-	99	100.000	ENSMFAG00000035798	LSM8	71	100.000	Macaca_fascicularis
ENSHGLG00000001988	-	99	95.588	ENSMFAG00000013044	-	71	95.588	Macaca_fascicularis
ENSHGLG00000001988	-	99	100.000	ENSMMUG00000046401	LSM8	62	95.652	Macaca_mulatta
ENSHGLG00000001988	-	99	100.000	ENSMNEG00000036764	-	71	100.000	Macaca_nemestrina
ENSHGLG00000001988	-	68	95.745	ENSMNEG00000011141	-	63	95.745	Macaca_nemestrina
ENSHGLG00000001988	-	99	100.000	ENSMLEG00000035828	-	71	100.000	Mandrillus_leucophaeus
ENSHGLG00000001988	-	99	82.353	ENSMLEG00000039324	-	68	82.353	Mandrillus_leucophaeus
ENSHGLG00000001988	-	68	100.000	ENSMAMG00000018839	lsm8	63	100.000	Mastacembelus_armatus
ENSHGLG00000001988	-	99	92.647	ENSMZEG00005019138	lsm8	71	92.647	Maylandia_zebra
ENSHGLG00000001988	-	99	100.000	ENSMGAG00000008808	LSM8	71	100.000	Meleagris_gallopavo
ENSHGLG00000001988	-	99	76.471	ENSMAUG00000015356	-	67	76.471	Mesocricetus_auratus
ENSHGLG00000001988	-	99	100.000	ENSMAUG00000015721	-	72	100.000	Mesocricetus_auratus
ENSHGLG00000001988	-	64	90.909	ENSMAUG00000020287	-	62	86.957	Mesocricetus_auratus
ENSHGLG00000001988	-	99	100.000	ENSMICG00000042730	LSM8	71	100.000	Microcebus_murinus
ENSHGLG00000001988	-	99	100.000	ENSMOCG00000001688	Lsm8	71	100.000	Microtus_ochrogaster
ENSHGLG00000001988	-	68	100.000	ENSMMOG00000006046	lsm8	63	100.000	Mola_mola
ENSHGLG00000001988	-	68	100.000	ENSMODG00000015729	LSM8	60	100.000	Monodelphis_domestica
ENSHGLG00000001988	-	99	94.118	ENSMALG00000000405	lsm8	71	94.118	Monopterus_albus
ENSHGLG00000001988	-	99	100.000	MGP_CAROLIEiJ_G0028125	-	71	100.000	Mus_caroli
ENSHGLG00000001988	-	99	100.000	ENSMUSG00000044155	Lsm8	71	100.000	Mus_musculus
ENSHGLG00000001988	-	99	100.000	MGP_PahariEiJ_G0021881	Lsm8	71	100.000	Mus_pahari
ENSHGLG00000001988	-	99	100.000	MGP_SPRETEiJ_G0029125	-	71	100.000	Mus_spretus
ENSHGLG00000001988	-	99	98.529	ENSMLUG00000027762	-	71	98.529	Myotis_lucifugus
ENSHGLG00000001988	-	99	100.000	ENSMLUG00000006837	-	71	100.000	Myotis_lucifugus
ENSHGLG00000001988	-	99	100.000	ENSNGAG00000016554	Lsm8	71	100.000	Nannospalax_galili
ENSHGLG00000001988	-	99	92.647	ENSNBRG00000014441	lsm8	71	92.647	Neolamprologus_brichardi
ENSHGLG00000001988	-	99	100.000	ENSNLEG00000011768	LSM8	71	100.000	Nomascus_leucogenys
ENSHGLG00000001988	-	99	83.824	ENSMEUG00000007801	LSM8	71	83.824	Notamacropus_eugenii
ENSHGLG00000001988	-	83	100.000	ENSOPRG00000014809	LSM8	67	100.000	Ochotona_princeps
ENSHGLG00000001988	-	99	100.000	ENSODEG00000000418	-	71	100.000	Octodon_degus
ENSHGLG00000001988	-	99	80.882	ENSODEG00000020290	-	79	80.882	Octodon_degus
ENSHGLG00000001988	-	99	98.529	ENSOANG00000014536	LSM8	71	98.529	Ornithorhynchus_anatinus
ENSHGLG00000001988	-	99	98.551	ENSOCUG00000017359	LSM8	71	98.551	Oryctolagus_cuniculus
ENSHGLG00000001988	-	99	77.941	ENSORLG00000017432	lsm8	70	77.941	Oryzias_latipes
ENSHGLG00000001988	-	99	77.941	ENSORLG00020004376	lsm8	70	77.941	Oryzias_latipes_hni
ENSHGLG00000001988	-	99	92.647	ENSORLG00015003757	lsm8	71	92.647	Oryzias_latipes_hsok
ENSHGLG00000001988	-	99	76.471	ENSOMEG00000022509	lsm8	69	76.471	Oryzias_melastigma
ENSHGLG00000001988	-	99	100.000	ENSOGAG00000013377	LSM8	71	100.000	Otolemur_garnettii
ENSHGLG00000001988	-	99	100.000	ENSOARG00000017974	LSM8	71	100.000	Ovis_aries
ENSHGLG00000001988	-	68	100.000	ENSPPAG00000043228	-	63	100.000	Pan_paniscus
ENSHGLG00000001988	-	99	100.000	ENSPPRG00000006444	LSM8	71	100.000	Panthera_pardus
ENSHGLG00000001988	-	99	100.000	ENSPTIG00000004722	LSM8	93	100.000	Panthera_tigris_altaica
ENSHGLG00000001988	-	68	100.000	ENSPTRG00000046596	-	63	100.000	Pan_troglodytes
ENSHGLG00000001988	-	99	95.588	ENSPANG00000019395	-	71	95.588	Papio_anubis
ENSHGLG00000001988	-	99	100.000	ENSPANG00000035470	-	71	100.000	Papio_anubis
ENSHGLG00000001988	-	83	98.246	ENSPKIG00000006092	lsm8	58	98.246	Paramormyrops_kingsleyae
ENSHGLG00000001988	-	68	100.000	ENSPSIG00000017054	LSM8	63	100.000	Pelodiscus_sinensis
ENSHGLG00000001988	-	68	100.000	ENSPMGG00000016442	lsm8	63	100.000	Periophthalmus_magnuspinnatus
ENSHGLG00000001988	-	67	95.652	ENSPEMG00000009153	Lsm8	62	95.652	Peromyscus_maniculatus_bairdii
ENSHGLG00000001988	-	99	100.000	ENSPCIG00000021467	LSM8	72	100.000	Phascolarctos_cinereus
ENSHGLG00000001988	-	99	91.176	ENSPFOG00000012340	lsm8	71	91.176	Poecilia_formosa
ENSHGLG00000001988	-	83	94.737	ENSPLAG00000000516	lsm8	59	94.737	Poecilia_latipinna
ENSHGLG00000001988	-	99	91.176	ENSPMEG00000022567	lsm8	71	91.176	Poecilia_mexicana
ENSHGLG00000001988	-	99	100.000	ENSPPYG00000017942	LSM8	71	100.000	Pongo_abelii
ENSHGLG00000001988	-	99	100.000	ENSPCOG00000003309	-	71	100.000	Propithecus_coquereli
ENSHGLG00000001988	-	91	87.302	ENSPCOG00000017982	-	73	87.302	Propithecus_coquereli
ENSHGLG00000001988	-	83	98.246	ENSPVAG00000000990	LSM8	67	98.246	Pteropus_vampyrus
ENSHGLG00000001988	-	99	92.647	ENSPNYG00000011448	lsm8	71	92.647	Pundamilia_nyererei
ENSHGLG00000001988	-	99	94.118	ENSPNAG00000010252	lsm8	71	94.118	Pygocentrus_nattereri
ENSHGLG00000001988	-	99	100.000	ENSRNOG00000058677	Lsm8	71	100.000	Rattus_norvegicus
ENSHGLG00000001988	-	99	100.000	ENSRBIG00000032851	LSM8	71	100.000	Rhinopithecus_bieti
ENSHGLG00000001988	-	99	100.000	ENSRROG00000039618	LSM8	71	100.000	Rhinopithecus_roxellana
ENSHGLG00000001988	-	99	100.000	ENSSBOG00000023223	LSM8	71	100.000	Saimiri_boliviensis_boliviensis
ENSHGLG00000001988	-	99	100.000	ENSSHAG00000018435	-	71	100.000	Sarcophilus_harrisii
ENSHGLG00000001988	-	99	91.176	ENSSFOG00015004412	lsm8	71	91.176	Scleropages_formosus
ENSHGLG00000001988	-	68	100.000	ENSSMAG00000009458	lsm8	63	100.000	Scophthalmus_maximus
ENSHGLG00000001988	-	99	92.647	ENSSDUG00000014702	lsm8	71	92.647	Seriola_dumerili
ENSHGLG00000001988	-	68	100.000	ENSSLDG00000016870	lsm8	63	100.000	Seriola_lalandi_dorsalis
ENSHGLG00000001988	-	64	100.000	ENSSARG00000009628	-	61	100.000	Sorex_araneus
ENSHGLG00000001988	-	99	100.000	ENSSPUG00000017419	LSM8	71	100.000	Sphenodon_punctatus
ENSHGLG00000001988	-	99	92.647	ENSSPAG00000021422	lsm8	71	92.647	Stegastes_partitus
ENSHGLG00000001988	-	99	100.000	ENSSSCG00000021652	LSM8	71	100.000	Sus_scrofa
ENSHGLG00000001988	-	99	98.529	ENSTGUG00000004730	-	71	98.529	Taeniopygia_guttata
ENSHGLG00000001988	-	99	97.059	ENSTGUG00000016823	-	71	97.059	Taeniopygia_guttata
ENSHGLG00000001988	-	99	92.647	ENSTRUG00000025192	lsm8	71	92.647	Takifugu_rubripes
ENSHGLG00000001988	-	99	92.647	ENSTNIG00000002864	lsm8	71	92.647	Tetraodon_nigroviridis
ENSHGLG00000001988	-	99	100.000	ENSTTRG00000001023	LSM8	71	100.000	Tursiops_truncatus
ENSHGLG00000001988	-	87	95.000	ENSUAMG00000006943	-	63	95.000	Ursus_americanus
ENSHGLG00000001988	-	87	95.000	ENSUMAG00000003073	LSM8	64	95.000	Ursus_maritimus
ENSHGLG00000001988	-	99	100.000	ENSVPAG00000001530	LSM8	71	100.000	Vicugna_pacos
ENSHGLG00000001988	-	68	97.872	ENSVVUG00000013248	-	52	97.872	Vulpes_vulpes
ENSHGLG00000001988	-	88	98.361	ENSXETG00000021829	lsm8	63	98.361	Xenopus_tropicalis
ENSHGLG00000001988	-	96	89.394	ENSXCOG00000012938	lsm8	69	89.394	Xiphophorus_couchianus
ENSHGLG00000001988	-	99	91.176	ENSXMAG00000025919	lsm8	71	91.176	Xiphophorus_maculatus