EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000002164 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 17621 bases
Position: chrJH602170.1:2930691-2948311
Accession: 101721354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000002887	TRM13	PF05206.14	2.3e-93	1	1
ENSHGLP00000002887	zf-U11-48K	PF05253.12	2.5e-09	1	1
ENSHGLP00000002887	zf-TRM13_CCCH	PF11722.8	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000002941	TRMT13-201	1449	XM_004869123	ENSHGLP00000002887	483 (aa)	XP_004869180	-

Gene Model

Click here to download ENSHGLG00000002164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000002164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000002164	TRMT13	99	90.966	ENSG00000122435	TRMT13	99	90.966	Homo_sapiens
ENSHGLG00000002164	TRMT13	95	48.104	ENSAPOG00000015131	trmt13	99	48.589	Acanthochromis_polyacanthus
ENSHGLG00000002164	TRMT13	99	89.706	ENSAMEG00000008917	TRMT13	99	89.706	Ailuropoda_melanoleuca
ENSHGLG00000002164	TRMT13	97	50.622	ENSACIG00000005804	trmt13	96	49.585	Amphilophus_citrinellus
ENSHGLG00000002164	TRMT13	95	48.703	ENSAOCG00000023585	trmt13	99	48.703	Amphiprion_ocellaris
ENSHGLG00000002164	TRMT13	95	48.703	ENSAPEG00000004025	trmt13	99	48.703	Amphiprion_percula
ENSHGLG00000002164	TRMT13	98	49.896	ENSATEG00000006597	trmt13	98	49.896	Anabas_testudineus
ENSHGLG00000002164	TRMT13	87	67.136	ENSAPLG00000014924	TRMT13	99	67.136	Anas_platyrhynchos
ENSHGLG00000002164	TRMT13	97	62.420	ENSACAG00000003498	TRMT13	99	62.420	Anolis_carolinensis
ENSHGLG00000002164	TRMT13	99	91.176	ENSANAG00000019525	TRMT13	100	92.661	Aotus_nancymaae
ENSHGLG00000002164	TRMT13	96	53.191	ENSACLG00000020018	trmt13	99	53.191	Astatotilapia_calliptera
ENSHGLG00000002164	TRMT13	95	54.701	ENSAMXG00000017963	trmt13	98	55.342	Astyanax_mexicanus
ENSHGLG00000002164	TRMT13	99	88.866	ENSBTAG00000015781	TRMT13	99	88.866	Bos_taurus
ENSHGLG00000002164	TRMT13	99	90.546	ENSCJAG00000000200	TRMT13	99	92.661	Callithrix_jacchus
ENSHGLG00000002164	TRMT13	65	88.571	ENSCAFG00000020021	TRMT13	99	88.571	Canis_familiaris
ENSHGLG00000002164	TRMT13	57	91.636	ENSCAFG00020011572	TRMT13	95	91.636	Canis_lupus_dingo
ENSHGLG00000002164	TRMT13	98	89.053	ENSCHIG00000015395	TRMT13	99	89.053	Capra_hircus
ENSHGLG00000002164	TRMT13	96	81.897	ENSTSYG00000010811	TRMT13	98	88.889	Carlito_syrichta
ENSHGLG00000002164	TRMT13	75	73.278	ENSCAPG00000009085	TRMT13	100	73.829	Cavia_aperea
ENSHGLG00000002164	TRMT13	98	94.526	ENSCPOG00000000694	TRMT13	99	94.526	Cavia_porcellus
ENSHGLG00000002164	TRMT13	99	90.966	ENSCCAG00000023772	TRMT13	100	91.743	Cebus_capucinus
ENSHGLG00000002164	TRMT13	99	91.387	ENSCATG00000033556	TRMT13	100	91.743	Cercocebus_atys
ENSHGLG00000002164	TRMT13	87	87.441	ENSCLAG00000008220	TRMT13	99	88.152	Chinchilla_lanigera
ENSHGLG00000002164	TRMT13	99	91.597	ENSCSAG00000001506	TRMT13	99	91.597	Chlorocebus_sabaeus
ENSHGLG00000002164	TRMT13	98	69.263	ENSCPBG00000026671	TRMT13	99	69.263	Chrysemys_picta_bellii
ENSHGLG00000002164	TRMT13	99	91.807	ENSCANG00000034659	TRMT13	100	92.661	Colobus_angolensis_palliatus
ENSHGLG00000002164	TRMT13	99	87.683	ENSCGRG00001021601	Trmt13	99	87.683	Cricetulus_griseus_chok1gshd
ENSHGLG00000002164	TRMT13	53	85.490	ENSCGRG00000000093	-	98	85.490	Cricetulus_griseus_crigri
ENSHGLG00000002164	TRMT13	96	47.629	ENSCSEG00000000591	trmt13	98	47.186	Cynoglossus_semilaevis
ENSHGLG00000002164	TRMT13	95	48.312	ENSCVAG00000017342	trmt13	93	49.367	Cyprinodon_variegatus
ENSHGLG00000002164	TRMT13	95	56.989	ENSDARG00000102846	trmt13	96	56.989	Danio_rerio
ENSHGLG00000002164	TRMT13	57	88.489	ENSDNOG00000001710	TRMT13	85	88.489	Dasypus_novemcinctus
ENSHGLG00000002164	TRMT13	99	88.655	ENSDORG00000015808	Trmt13	99	88.655	Dipodomys_ordii
ENSHGLG00000002164	TRMT13	95	31.303	FBgn0037435	CG18048	94	31.092	Drosophila_melanogaster
ENSHGLG00000002164	TRMT13	98	75.157	ENSETEG00000005819	TRMT13	99	75.157	Echinops_telfairi
ENSHGLG00000002164	TRMT13	94	45.356	ENSEBUG00000014444	trmt13	96	45.356	Eptatretus_burgeri
ENSHGLG00000002164	TRMT13	98	91.789	ENSEASG00005015918	TRMT13	99	91.789	Equus_asinus_asinus
ENSHGLG00000002164	TRMT13	98	91.368	ENSECAG00000022626	TRMT13	99	91.368	Equus_caballus
ENSHGLG00000002164	TRMT13	78	80.063	ENSEEUG00000000294	TRMT13	78	80.063	Erinaceus_europaeus
ENSHGLG00000002164	TRMT13	97	55.462	ENSELUG00000003803	trmt13	99	55.274	Esox_lucius
ENSHGLG00000002164	TRMT13	99	90.966	ENSFCAG00000030618	TRMT13	100	95.413	Felis_catus
ENSHGLG00000002164	TRMT13	98	63.907	ENSFALG00000002424	TRMT13	98	63.907	Ficedula_albicollis
ENSHGLG00000002164	TRMT13	99	96.058	ENSFDAG00000006342	TRMT13	99	96.058	Fukomys_damarensis
ENSHGLG00000002164	TRMT13	75	52.660	ENSFHEG00000022954	trmt13	98	50.743	Fundulus_heteroclitus
ENSHGLG00000002164	TRMT13	94	48.791	ENSGMOG00000013223	trmt13	100	48.791	Gadus_morhua
ENSHGLG00000002164	TRMT13	96	65.302	ENSGALG00000005290	TRMT13	98	65.106	Gallus_gallus
ENSHGLG00000002164	TRMT13	75	51.882	ENSGAFG00000001577	trmt13	81	51.882	Gambusia_affinis
ENSHGLG00000002164	TRMT13	98	49.582	ENSGACG00000013428	trmt13	100	50.209	Gasterosteus_aculeatus
ENSHGLG00000002164	TRMT13	98	70.168	ENSGAGG00000023303	TRMT13	99	72.364	Gopherus_agassizii
ENSHGLG00000002164	TRMT13	99	90.756	ENSGGOG00000005616	TRMT13	99	90.756	Gorilla_gorilla
ENSHGLG00000002164	TRMT13	96	53.404	ENSHBUG00000007754	trmt13	99	53.404	Haplochromis_burtoni
ENSHGLG00000002164	TRMT13	100	100.000	ENSHGLG00100001618	TRMT13	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000002164	TRMT13	94	46.957	ENSHCOG00000020553	trmt13	96	46.957	Hippocampus_comes
ENSHGLG00000002164	TRMT13	95	56.304	ENSIPUG00000024787	trmt13	97	56.645	Ictalurus_punctatus
ENSHGLG00000002164	TRMT13	99	93.291	ENSSTOG00000013483	TRMT13	99	93.291	Ictidomys_tridecemlineatus
ENSHGLG00000002164	TRMT13	99	87.395	ENSJJAG00000018012	Trmt13	99	87.395	Jaculus_jaculus
ENSHGLG00000002164	TRMT13	64	48.726	ENSKMAG00000007639	trmt13	92	48.726	Kryptolebias_marmoratus
ENSHGLG00000002164	TRMT13	96	50.209	ENSLBEG00000020238	trmt13	99	50.209	Labrus_bergylta
ENSHGLG00000002164	TRMT13	96	62.766	ENSLACG00000013153	TRMT13	99	62.344	Latimeria_chalumnae
ENSHGLG00000002164	TRMT13	95	59.524	ENSLOCG00000000418	trmt13	97	59.524	Lepisosteus_oculatus
ENSHGLG00000002164	TRMT13	76	85.598	ENSLAFG00000002383	TRMT13	99	85.598	Loxodonta_africana
ENSHGLG00000002164	TRMT13	99	91.387	ENSMFAG00000034681	TRMT13	100	92.661	Macaca_fascicularis
ENSHGLG00000002164	TRMT13	99	91.387	ENSMMUG00000004243	TRMT13	100	92.661	Macaca_mulatta
ENSHGLG00000002164	TRMT13	99	91.387	ENSMNEG00000036102	TRMT13	100	92.661	Macaca_nemestrina
ENSHGLG00000002164	TRMT13	99	91.807	ENSMLEG00000034258	TRMT13	100	93.578	Mandrillus_leucophaeus
ENSHGLG00000002164	TRMT13	96	50.211	ENSMAMG00000016597	trmt13	97	50.211	Mastacembelus_armatus
ENSHGLG00000002164	TRMT13	96	52.979	ENSMZEG00005020959	trmt13	99	52.979	Maylandia_zebra
ENSHGLG00000002164	TRMT13	88	66.667	ENSMGAG00000006970	TRMT13	99	66.667	Meleagris_gallopavo
ENSHGLG00000002164	TRMT13	99	86.611	ENSMAUG00000010448	Trmt13	99	86.611	Mesocricetus_auratus
ENSHGLG00000002164	TRMT13	99	92.017	ENSMICG00000005283	TRMT13	100	94.495	Microcebus_murinus
ENSHGLG00000002164	TRMT13	99	83.576	ENSMOCG00000019914	Trmt13	100	83.576	Microtus_ochrogaster
ENSHGLG00000002164	TRMT13	54	51.321	ENSMMOG00000007762	trmt13	89	51.321	Mola_mola
ENSHGLG00000002164	TRMT13	99	77.083	ENSMODG00000003646	TRMT13	99	77.083	Monodelphis_domestica
ENSHGLG00000002164	TRMT13	99	48.755	ENSMALG00000020965	trmt13	99	48.755	Monopterus_albus
ENSHGLG00000002164	TRMT13	99	87.683	MGP_CAROLIEiJ_G0025568	Trmt13	94	92.857	Mus_caroli
ENSHGLG00000002164	TRMT13	99	87.265	ENSMUSG00000033439	Trmt13	94	92.857	Mus_musculus
ENSHGLG00000002164	TRMT13	99	88.518	MGP_PahariEiJ_G0027014	Trmt13	99	88.518	Mus_pahari
ENSHGLG00000002164	TRMT13	99	87.265	MGP_SPRETEiJ_G0026518	Trmt13	94	92.857	Mus_spretus
ENSHGLG00000002164	TRMT13	78	86.968	ENSMPUG00000002078	-	99	86.968	Mustela_putorius_furo
ENSHGLG00000002164	TRMT13	98	79.536	ENSMLUG00000002124	TRMT13	99	79.536	Myotis_lucifugus
ENSHGLG00000002164	TRMT13	98	46.791	ENSNBRG00000006783	trmt13	97	49.356	Neolamprologus_brichardi
ENSHGLG00000002164	TRMT13	99	90.966	ENSNLEG00000035917	TRMT13	100	90.826	Nomascus_leucogenys
ENSHGLG00000002164	TRMT13	51	72.984	ENSMEUG00000013346	-	100	72.984	Notamacropus_eugenii
ENSHGLG00000002164	TRMT13	66	90.441	ENSOPRG00000012048	TRMT13	66	90.441	Ochotona_princeps
ENSHGLG00000002164	TRMT13	96	52.766	ENSONIG00000004574	trmt13	99	52.766	Oreochromis_niloticus
ENSHGLG00000002164	TRMT13	89	73.427	ENSOANG00000012057	TRMT13	99	73.427	Ornithorhynchus_anatinus
ENSHGLG00000002164	TRMT13	99	90.147	ENSOCUG00000023095	TRMT13	99	90.147	Oryctolagus_cuniculus
ENSHGLG00000002164	TRMT13	97	47.368	ENSORLG00000003320	trmt13	99	48.000	Oryzias_latipes
ENSHGLG00000002164	TRMT13	96	47.234	ENSORLG00020005972	trmt13	98	46.895	Oryzias_latipes_hni
ENSHGLG00000002164	TRMT13	97	51.158	ENSORLG00015002270	trmt13	99	51.158	Oryzias_latipes_hsok
ENSHGLG00000002164	TRMT13	97	50.947	ENSOMEG00000006724	trmt13	95	51.158	Oryzias_melastigma
ENSHGLG00000002164	TRMT13	98	92.600	ENSOGAG00000005618	TRMT13	96	92.647	Otolemur_garnettii
ENSHGLG00000002164	TRMT13	98	89.053	ENSOARG00000017983	TRMT13	99	89.053	Ovis_aries
ENSHGLG00000002164	TRMT13	99	90.756	ENSPPAG00000043736	TRMT13	100	89.908	Pan_paniscus
ENSHGLG00000002164	TRMT13	99	91.176	ENSPPRG00000003424	TRMT13	100	95.413	Panthera_pardus
ENSHGLG00000002164	TRMT13	99	91.176	ENSPTIG00000018598	TRMT13	100	95.413	Panthera_tigris_altaica
ENSHGLG00000002164	TRMT13	99	90.756	ENSPTRG00000001001	TRMT13	100	89.908	Pan_troglodytes
ENSHGLG00000002164	TRMT13	99	91.807	ENSPANG00000007598	TRMT13	100	92.661	Papio_anubis
ENSHGLG00000002164	TRMT13	95	55.870	ENSPKIG00000001514	trmt13	98	55.870	Paramormyrops_kingsleyae
ENSHGLG00000002164	TRMT13	86	69.784	ENSPSIG00000012703	TRMT13	99	69.784	Pelodiscus_sinensis
ENSHGLG00000002164	TRMT13	96	50.749	ENSPMGG00000013298	trmt13	94	50.749	Periophthalmus_magnuspinnatus
ENSHGLG00000002164	TRMT13	99	86.611	ENSPEMG00000000275	Trmt13	99	86.611	Peromyscus_maniculatus_bairdii
ENSHGLG00000002164	TRMT13	94	45.359	ENSPMAG00000000823	trmt13	100	44.559	Petromyzon_marinus
ENSHGLG00000002164	TRMT13	98	77.197	ENSPCIG00000007699	TRMT13	99	77.824	Phascolarctos_cinereus
ENSHGLG00000002164	TRMT13	96	49.460	ENSPFOG00000008675	trmt13	96	49.460	Poecilia_formosa
ENSHGLG00000002164	TRMT13	95	49.149	ENSPLAG00000009709	trmt13	99	49.149	Poecilia_latipinna
ENSHGLG00000002164	TRMT13	95	48.077	ENSPMEG00000022954	trmt13	99	48.077	Poecilia_mexicana
ENSHGLG00000002164	TRMT13	76	51.187	ENSPREG00000005645	trmt13	91	50.178	Poecilia_reticulata
ENSHGLG00000002164	TRMT13	99	90.966	ENSPPYG00000001120	TRMT13	99	90.966	Pongo_abelii
ENSHGLG00000002164	TRMT13	99	86.875	ENSPCAG00000002340	TRMT13	99	86.875	Procavia_capensis
ENSHGLG00000002164	TRMT13	99	92.017	ENSPCOG00000017984	TRMT13	100	94.495	Propithecus_coquereli
ENSHGLG00000002164	TRMT13	98	90.526	ENSPVAG00000017430	TRMT13	99	90.526	Pteropus_vampyrus
ENSHGLG00000002164	TRMT13	96	51.064	ENSPNYG00000013690	trmt13	99	51.064	Pundamilia_nyererei
ENSHGLG00000002164	TRMT13	98	54.489	ENSPNAG00000022130	trmt13	100	54.489	Pygocentrus_nattereri
ENSHGLG00000002164	TRMT13	99	87.474	ENSRNOG00000015140	Trmt13	97	87.474	Rattus_norvegicus
ENSHGLG00000002164	TRMT13	99	91.807	ENSRBIG00000037686	TRMT13	100	92.661	Rhinopithecus_bieti
ENSHGLG00000002164	TRMT13	99	91.807	ENSRROG00000044057	TRMT13	100	92.661	Rhinopithecus_roxellana
ENSHGLG00000002164	TRMT13	99	91.176	ENSSBOG00000026541	TRMT13	100	92.661	Saimiri_boliviensis_boliviensis
ENSHGLG00000002164	TRMT13	89	78.009	ENSSHAG00000005213	TRMT13	96	78.009	Sarcophilus_harrisii
ENSHGLG00000002164	TRMT13	96	53.731	ENSSFOG00015017560	trmt13	98	54.506	Scleropages_formosus
ENSHGLG00000002164	TRMT13	97	49.689	ENSSMAG00000014592	trmt13	98	49.689	Scophthalmus_maximus
ENSHGLG00000002164	TRMT13	97	49.177	ENSSDUG00000015508	trmt13	98	49.287	Seriola_dumerili
ENSHGLG00000002164	TRMT13	97	49.795	ENSSLDG00000019060	trmt13	98	49.795	Seriola_lalandi_dorsalis
ENSHGLG00000002164	TRMT13	99	75.833	ENSSARG00000010344	TRMT13	99	75.833	Sorex_araneus
ENSHGLG00000002164	TRMT13	95	68.709	ENSSPUG00000016339	TRMT13	99	68.709	Sphenodon_punctatus
ENSHGLG00000002164	TRMT13	98	51.363	ENSSPAG00000011922	trmt13	99	51.452	Stegastes_partitus
ENSHGLG00000002164	TRMT13	99	90.336	ENSSSCG00000006869	TRMT13	99	90.336	Sus_scrofa
ENSHGLG00000002164	TRMT13	95	66.157	ENSTGUG00000005253	TRMT13	98	66.157	Taeniopygia_guttata
ENSHGLG00000002164	TRMT13	95	48.718	ENSTRUG00000008400	trmt13	99	48.523	Takifugu_rubripes
ENSHGLG00000002164	TRMT13	85	73.723	ENSTBEG00000008911	TRMT13	99	73.723	Tupaia_belangeri
ENSHGLG00000002164	TRMT13	51	98.684	ENSTTRG00000015302	-	60	98.684	Tursiops_truncatus
ENSHGLG00000002164	TRMT13	99	84.664	ENSUAMG00000017251	TRMT13	99	84.664	Ursus_americanus
ENSHGLG00000002164	TRMT13	99	89.916	ENSUMAG00000007901	TRMT13	99	90.164	Ursus_maritimus
ENSHGLG00000002164	TRMT13	89	72.664	ENSVPAG00000001034	TRMT13	99	72.664	Vicugna_pacos
ENSHGLG00000002164	TRMT13	99	89.627	ENSVVUG00000021996	TRMT13	100	89.627	Vulpes_vulpes
ENSHGLG00000002164	TRMT13	97	55.158	ENSXETG00000013204	trmt13	99	55.158	Xenopus_tropicalis
ENSHGLG00000002164	TRMT13	95	48.401	ENSXMAG00000010765	trmt13	99	48.401	Xiphophorus_maculatus