EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000002285 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 7689 bases
Position: chrJH602125.1:359184-366872
Accession: 101711493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000003058	PseudoU_synth_2	PF00849.22	8.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000003113	-	1642	XM_004862586	ENSHGLP00000003058	377 (aa)	XP_004862643	G5AXW4

Gene Model

Click here to download ENSHGLG00000002285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000002285's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000002285	RPUSD4	71	31.142	ENSHGLG00000011722	RPUSD3	70	31.488

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000002285	RPUSD4	100	83.024	ENSG00000165526	RPUSD4	100	83.024	Homo_sapiens
ENSHGLG00000002285	RPUSD4	90	51.156	ENSAPOG00000011024	rpusd4	85	51.156	Acanthochromis_polyacanthus
ENSHGLG00000002285	RPUSD4	100	82.228	ENSAMEG00000000127	-	100	82.228	Ailuropoda_melanoleuca
ENSHGLG00000002285	RPUSD4	67	79.577	ENSAMEG00000005953	-	100	79.577	Ailuropoda_melanoleuca
ENSHGLG00000002285	RPUSD4	86	49.240	ENSACIG00000003533	rpusd4	96	49.240	Amphilophus_citrinellus
ENSHGLG00000002285	RPUSD4	90	51.453	ENSAOCG00000015409	rpusd4	85	51.453	Amphiprion_ocellaris
ENSHGLG00000002285	RPUSD4	90	51.453	ENSAPEG00000018935	rpusd4	85	51.453	Amphiprion_percula
ENSHGLG00000002285	RPUSD4	89	49.568	ENSATEG00000008059	rpusd4	86	49.568	Anabas_testudineus
ENSHGLG00000002285	RPUSD4	73	58.781	ENSAPLG00000013250	RPUSD4	99	57.627	Anas_platyrhynchos
ENSHGLG00000002285	RPUSD4	96	60.383	ENSACAG00000000189	RPUSD4	96	60.383	Anolis_carolinensis
ENSHGLG00000002285	RPUSD4	99	81.989	ENSANAG00000024050	RPUSD4	100	81.989	Aotus_nancymaae
ENSHGLG00000002285	RPUSD4	89	50.575	ENSACLG00000020996	rpusd4	89	50.575	Astatotilapia_calliptera
ENSHGLG00000002285	RPUSD4	90	48.725	ENSAMXG00000031479	rpusd4	95	50.148	Astyanax_mexicanus
ENSHGLG00000002285	RPUSD4	100	76.984	ENSBTAG00000020900	RPUSD4	100	76.984	Bos_taurus
ENSHGLG00000002285	RPUSD4	98	82.162	ENSCJAG00000042850	RPUSD4	93	82.162	Callithrix_jacchus
ENSHGLG00000002285	RPUSD4	100	80.952	ENSCAFG00000010488	RPUSD4	100	80.952	Canis_familiaris
ENSHGLG00000002285	RPUSD4	100	80.952	ENSCAFG00020010621	RPUSD4	100	80.952	Canis_lupus_dingo
ENSHGLG00000002285	RPUSD4	100	78.364	ENSCHIG00000009975	RPUSD4	100	78.364	Capra_hircus
ENSHGLG00000002285	RPUSD4	100	84.881	ENSTSYG00000008456	RPUSD4	100	84.881	Carlito_syrichta
ENSHGLG00000002285	RPUSD4	68	86.434	ENSCAPG00000006040	RPUSD4	100	86.434	Cavia_aperea
ENSHGLG00000002285	RPUSD4	100	87.268	ENSCPOG00000014971	RPUSD4	100	87.268	Cavia_porcellus
ENSHGLG00000002285	RPUSD4	99	83.602	ENSCCAG00000027838	RPUSD4	100	83.602	Cebus_capucinus
ENSHGLG00000002285	RPUSD4	100	82.759	ENSCATG00000041570	RPUSD4	100	82.759	Cercocebus_atys
ENSHGLG00000002285	RPUSD4	100	89.920	ENSCLAG00000016553	RPUSD4	100	89.920	Chinchilla_lanigera
ENSHGLG00000002285	RPUSD4	100	81.963	ENSCSAG00000002274	RPUSD4	100	81.963	Chlorocebus_sabaeus
ENSHGLG00000002285	RPUSD4	75	81.979	ENSCHOG00000010249	RPUSD4	100	81.979	Choloepus_hoffmanni
ENSHGLG00000002285	RPUSD4	76	66.782	ENSCPBG00000011175	RPUSD4	99	66.782	Chrysemys_picta_bellii
ENSHGLG00000002285	RPUSD4	75	43.003	ENSCSAVG00000000872	-	57	43.003	Ciona_savignyi
ENSHGLG00000002285	RPUSD4	100	81.698	ENSCANG00000039684	RPUSD4	100	81.698	Colobus_angolensis_palliatus
ENSHGLG00000002285	RPUSD4	100	84.350	ENSCGRG00001024141	Rpusd4	100	84.350	Cricetulus_griseus_chok1gshd
ENSHGLG00000002285	RPUSD4	100	84.350	ENSCGRG00000014415	Rpusd4	100	84.350	Cricetulus_griseus_crigri
ENSHGLG00000002285	RPUSD4	88	50.296	ENSCVAG00000000392	rpusd4	95	50.296	Cyprinodon_variegatus
ENSHGLG00000002285	RPUSD4	88	50.296	ENSCVAG00000008761	rpusd4	86	50.296	Cyprinodon_variegatus
ENSHGLG00000002285	RPUSD4	85	50.621	ENSDARG00000012674	rpusd4	90	50.621	Danio_rerio
ENSHGLG00000002285	RPUSD4	100	77.719	ENSDNOG00000020026	RPUSD4	100	77.719	Dasypus_novemcinctus
ENSHGLG00000002285	RPUSD4	100	81.963	ENSDORG00000016717	Rpusd4	100	81.963	Dipodomys_ordii
ENSHGLG00000002285	RPUSD4	97	79.292	ENSETEG00000013953	RPUSD4	98	79.292	Echinops_telfairi
ENSHGLG00000002285	RPUSD4	100	83.554	ENSEASG00005022982	RPUSD4	100	83.554	Equus_asinus_asinus
ENSHGLG00000002285	RPUSD4	100	83.289	ENSECAG00000000557	RPUSD4	100	83.289	Equus_caballus
ENSHGLG00000002285	RPUSD4	82	76.842	ENSEEUG00000014036	RPUSD4	82	76.842	Erinaceus_europaeus
ENSHGLG00000002285	RPUSD4	94	51.639	ENSELUG00000008075	rpusd4	96	51.639	Esox_lucius
ENSHGLG00000002285	RPUSD4	100	80.371	ENSFCAG00000029789	RPUSD4	100	80.371	Felis_catus
ENSHGLG00000002285	RPUSD4	88	56.287	ENSFALG00000005171	RPUSD4	98	56.287	Ficedula_albicollis
ENSHGLG00000002285	RPUSD4	100	89.125	ENSFDAG00000014307	RPUSD4	100	89.125	Fukomys_damarensis
ENSHGLG00000002285	RPUSD4	90	49.025	ENSFHEG00000004329	rpusd4	92	49.025	Fundulus_heteroclitus
ENSHGLG00000002285	RPUSD4	85	51.070	ENSGMOG00000017726	rpusd4	96	51.070	Gadus_morhua
ENSHGLG00000002285	RPUSD4	74	61.348	ENSGALG00000024326	RPUSD4	95	56.725	Gallus_gallus
ENSHGLG00000002285	RPUSD4	94	46.429	ENSGAFG00000021559	rpusd4	93	46.429	Gambusia_affinis
ENSHGLG00000002285	RPUSD4	89	49.412	ENSGACG00000001657	rpusd4	100	49.412	Gasterosteus_aculeatus
ENSHGLG00000002285	RPUSD4	89	63.127	ENSGAGG00000000132	RPUSD4	94	63.127	Gopherus_agassizii
ENSHGLG00000002285	RPUSD4	100	82.228	ENSGGOG00000016494	RPUSD4	100	82.228	Gorilla_gorilla
ENSHGLG00000002285	RPUSD4	89	50.575	ENSHBUG00000022838	rpusd4	89	50.575	Haplochromis_burtoni
ENSHGLG00000002285	RPUSD4	100	100.000	ENSHGLG00100006385	RPUSD4	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000002285	RPUSD4	86	51.515	ENSHCOG00000006612	rpusd4	84	51.515	Hippocampus_comes
ENSHGLG00000002285	RPUSD4	92	52.149	ENSIPUG00000023879	rusd4	90	52.149	Ictalurus_punctatus
ENSHGLG00000002285	RPUSD4	97	85.440	ENSSTOG00000025280	RPUSD4	100	85.440	Ictidomys_tridecemlineatus
ENSHGLG00000002285	RPUSD4	99	84.677	ENSJJAG00000018673	Rpusd4	100	84.677	Jaculus_jaculus
ENSHGLG00000002285	RPUSD4	89	51.765	ENSKMAG00000021805	rpusd4	88	51.765	Kryptolebias_marmoratus
ENSHGLG00000002285	RPUSD4	86	50.909	ENSLBEG00000020394	rpusd4	92	50.909	Labrus_bergylta
ENSHGLG00000002285	RPUSD4	85	60.494	ENSLACG00000011028	RPUSD4	85	59.347	Latimeria_chalumnae
ENSHGLG00000002285	RPUSD4	85	49.383	ENSLOCG00000003124	rpusd4	86	49.383	Lepisosteus_oculatus
ENSHGLG00000002285	RPUSD4	100	81.167	ENSLAFG00000005211	RPUSD4	100	81.167	Loxodonta_africana
ENSHGLG00000002285	RPUSD4	100	82.759	ENSMFAG00000039513	RPUSD4	100	82.759	Macaca_fascicularis
ENSHGLG00000002285	RPUSD4	100	82.493	ENSMMUG00000007933	RPUSD4	100	82.493	Macaca_mulatta
ENSHGLG00000002285	RPUSD4	100	82.493	ENSMNEG00000027414	RPUSD4	100	82.493	Macaca_nemestrina
ENSHGLG00000002285	RPUSD4	100	82.228	ENSMLEG00000042461	RPUSD4	100	82.228	Mandrillus_leucophaeus
ENSHGLG00000002285	RPUSD4	87	49.254	ENSMAMG00000023839	rpusd4	86	49.254	Mastacembelus_armatus
ENSHGLG00000002285	RPUSD4	89	50.575	ENSMZEG00005011999	rpusd4	89	50.575	Maylandia_zebra
ENSHGLG00000002285	RPUSD4	74	59.643	ENSMGAG00000000840	RPUSD4	99	57.099	Meleagris_gallopavo
ENSHGLG00000002285	RPUSD4	100	81.167	ENSMAUG00000010280	Rpusd4	100	81.167	Mesocricetus_auratus
ENSHGLG00000002285	RPUSD4	100	82.493	ENSMICG00000015979	RPUSD4	100	82.493	Microcebus_murinus
ENSHGLG00000002285	RPUSD4	100	78.515	ENSMOCG00000000661	Rpusd4	100	78.515	Microtus_ochrogaster
ENSHGLG00000002285	RPUSD4	79	53.795	ENSMMOG00000021731	rpusd4	90	53.795	Mola_mola
ENSHGLG00000002285	RPUSD4	92	71.676	ENSMODG00000004521	RPUSD4	89	71.676	Monodelphis_domestica
ENSHGLG00000002285	RPUSD4	80	51.948	ENSMALG00000005839	rpusd4	98	50.617	Monopterus_albus
ENSHGLG00000002285	RPUSD4	100	80.106	MGP_CAROLIEiJ_G0031954	Rpusd4	100	80.106	Mus_caroli
ENSHGLG00000002285	RPUSD4	100	79.841	ENSMUSG00000032044	Rpusd4	100	79.841	Mus_musculus
ENSHGLG00000002285	RPUSD4	100	80.371	MGP_PahariEiJ_G0014819	Rpusd4	100	80.371	Mus_pahari
ENSHGLG00000002285	RPUSD4	100	80.371	MGP_SPRETEiJ_G0033078	Rpusd4	100	80.371	Mus_spretus
ENSHGLG00000002285	RPUSD4	98	80.054	ENSMPUG00000006608	RPUSD4	99	80.054	Mustela_putorius_furo
ENSHGLG00000002285	RPUSD4	67	83.858	ENSMLUG00000029348	-	100	83.858	Myotis_lucifugus
ENSHGLG00000002285	RPUSD4	97	80.435	ENSMLUG00000017328	-	97	80.435	Myotis_lucifugus
ENSHGLG00000002285	RPUSD4	98	82.210	ENSNGAG00000020847	Rpusd4	98	82.210	Nannospalax_galili
ENSHGLG00000002285	RPUSD4	86	51.976	ENSNBRG00000005207	rpusd4	95	51.976	Neolamprologus_brichardi
ENSHGLG00000002285	RPUSD4	100	82.493	ENSNLEG00000007465	RPUSD4	100	82.493	Nomascus_leucogenys
ENSHGLG00000002285	RPUSD4	98	68.919	ENSMEUG00000004370	RPUSD4	99	68.919	Notamacropus_eugenii
ENSHGLG00000002285	RPUSD4	70	60.377	ENSOPRG00000013141	-	100	60.377	Ochotona_princeps
ENSHGLG00000002285	RPUSD4	100	88.859	ENSODEG00000004577	RPUSD4	100	88.859	Octodon_degus
ENSHGLG00000002285	RPUSD4	89	51.020	ENSONIG00000018879	rpusd4	92	51.020	Oreochromis_niloticus
ENSHGLG00000002285	RPUSD4	77	68.475	ENSOANG00000007247	RPUSD4	95	68.350	Ornithorhynchus_anatinus
ENSHGLG00000002285	RPUSD4	99	82.181	ENSOCUG00000017039	RPUSD4	99	82.181	Oryctolagus_cuniculus
ENSHGLG00000002285	RPUSD4	88	48.968	ENSORLG00000002750	rpusd4	93	48.968	Oryzias_latipes
ENSHGLG00000002285	RPUSD4	85	50.613	ENSORLG00020002044	rpusd4	81	50.613	Oryzias_latipes_hni
ENSHGLG00000002285	RPUSD4	85	50.154	ENSORLG00015020034	rpusd4	81	50.154	Oryzias_latipes_hsok
ENSHGLG00000002285	RPUSD4	88	51.190	ENSOMEG00000004861	rpusd4	82	51.190	Oryzias_melastigma
ENSHGLG00000002285	RPUSD4	100	80.952	ENSOGAG00000008922	RPUSD4	100	80.952	Otolemur_garnettii
ENSHGLG00000002285	RPUSD4	97	78.862	ENSOARG00000012238	RPUSD4	99	78.042	Ovis_aries
ENSHGLG00000002285	RPUSD4	100	83.289	ENSPPAG00000042883	RPUSD4	93	83.289	Pan_paniscus
ENSHGLG00000002285	RPUSD4	100	80.371	ENSPPRG00000003081	RPUSD4	100	80.371	Panthera_pardus
ENSHGLG00000002285	RPUSD4	100	80.371	ENSPTIG00000012059	RPUSD4	100	80.371	Panthera_tigris_altaica
ENSHGLG00000002285	RPUSD4	100	83.024	ENSPTRG00000004454	RPUSD4	100	83.024	Pan_troglodytes
ENSHGLG00000002285	RPUSD4	100	83.289	ENSPANG00000015040	RPUSD4	100	83.289	Papio_anubis
ENSHGLG00000002285	RPUSD4	89	57.101	ENSPKIG00000023986	rpusd4	86	57.101	Paramormyrops_kingsleyae
ENSHGLG00000002285	RPUSD4	79	66.333	ENSPSIG00000014268	RPUSD4	95	66.333	Pelodiscus_sinensis
ENSHGLG00000002285	RPUSD4	91	49.288	ENSPMGG00000002806	rpusd4	94	49.565	Periophthalmus_magnuspinnatus
ENSHGLG00000002285	RPUSD4	100	74.801	ENSPEMG00000000278	Rpusd4	100	74.801	Peromyscus_maniculatus_bairdii
ENSHGLG00000002285	RPUSD4	81	45.994	ENSPMAG00000008183	rpusd4	97	45.994	Petromyzon_marinus
ENSHGLG00000002285	RPUSD4	97	70.879	ENSPCIG00000010212	RPUSD4	100	70.879	Phascolarctos_cinereus
ENSHGLG00000002285	RPUSD4	94	48.370	ENSPFOG00000019030	rpusd4	96	48.370	Poecilia_formosa
ENSHGLG00000002285	RPUSD4	94	48.907	ENSPLAG00000016848	rpusd4	93	48.907	Poecilia_latipinna
ENSHGLG00000002285	RPUSD4	94	47.945	ENSPMEG00000017534	rpusd4	93	47.945	Poecilia_mexicana
ENSHGLG00000002285	RPUSD4	88	49.563	ENSPREG00000005689	rpusd4	88	49.563	Poecilia_reticulata
ENSHGLG00000002285	RPUSD4	100	83.289	ENSPPYG00000004043	RPUSD4	100	83.289	Pongo_abelii
ENSHGLG00000002285	RPUSD4	80	78.804	ENSPCAG00000000753	RPUSD4	81	78.804	Procavia_capensis
ENSHGLG00000002285	RPUSD4	98	76.280	ENSPCOG00000020694	RPUSD4	100	76.280	Propithecus_coquereli
ENSHGLG00000002285	RPUSD4	97	82.834	ENSPVAG00000000988	RPUSD4	98	82.834	Pteropus_vampyrus
ENSHGLG00000002285	RPUSD4	89	49.713	ENSPNYG00000009652	rpusd4	89	49.713	Pundamilia_nyererei
ENSHGLG00000002285	RPUSD4	88	51.796	ENSPNAG00000012264	rpusd4	88	51.796	Pygocentrus_nattereri
ENSHGLG00000002285	RPUSD4	100	81.167	ENSRNOG00000011567	Rpusd4	100	81.167	Rattus_norvegicus
ENSHGLG00000002285	RPUSD4	100	82.759	ENSRBIG00000034842	RPUSD4	100	82.759	Rhinopithecus_bieti
ENSHGLG00000002285	RPUSD4	100	82.759	ENSRROG00000039753	RPUSD4	100	82.759	Rhinopithecus_roxellana
ENSHGLG00000002285	RPUSD4	99	81.720	ENSSBOG00000030413	RPUSD4	100	81.720	Saimiri_boliviensis_boliviensis
ENSHGLG00000002285	RPUSD4	80	74.751	ENSSHAG00000008304	RPUSD4	99	74.751	Sarcophilus_harrisii
ENSHGLG00000002285	RPUSD4	88	57.101	ENSSFOG00015006203	rpusd4	92	56.932	Scleropages_formosus
ENSHGLG00000002285	RPUSD4	89	49.267	ENSSMAG00000020978	rpusd4	87	50.303	Scophthalmus_maximus
ENSHGLG00000002285	RPUSD4	88	48.665	ENSSDUG00000013399	rpusd4	88	48.665	Seriola_dumerili
ENSHGLG00000002285	RPUSD4	88	48.961	ENSSLDG00000023507	rpusd4	88	48.961	Seriola_lalandi_dorsalis
ENSHGLG00000002285	RPUSD4	89	61.176	ENSSPUG00000001401	RPUSD4	92	63.988	Sphenodon_punctatus
ENSHGLG00000002285	RPUSD4	93	50.838	ENSSPAG00000012163	rpusd4	91	50.838	Stegastes_partitus
ENSHGLG00000002285	RPUSD4	100	81.698	ENSSSCG00000015233	RPUSD4	100	81.698	Sus_scrofa
ENSHGLG00000002285	RPUSD4	79	59.000	ENSTGUG00000000773	RPUSD4	100	59.000	Taeniopygia_guttata
ENSHGLG00000002285	RPUSD4	86	51.515	ENSTRUG00000012283	rpusd4	84	51.515	Takifugu_rubripes
ENSHGLG00000002285	RPUSD4	96	46.579	ENSTNIG00000014676	rpusd4	96	46.579	Tetraodon_nigroviridis
ENSHGLG00000002285	RPUSD4	100	79.841	ENSTTRG00000001555	RPUSD4	100	79.841	Tursiops_truncatus
ENSHGLG00000002285	RPUSD4	100	81.698	ENSUMAG00000002219	RPUSD4	100	81.698	Ursus_maritimus
ENSHGLG00000002285	RPUSD4	70	83.774	ENSVPAG00000001066	RPUSD4	100	83.774	Vicugna_pacos
ENSHGLG00000002285	RPUSD4	100	80.688	ENSVVUG00000020101	RPUSD4	100	80.688	Vulpes_vulpes
ENSHGLG00000002285	RPUSD4	94	48.087	ENSXCOG00000004676	rpusd4	93	48.087	Xiphophorus_couchianus
ENSHGLG00000002285	RPUSD4	94	48.087	ENSXMAG00000023351	rpusd4	93	48.087	Xiphophorus_maculatus