EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000002617 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 27740 bases
Position: chrJH602170.1:3144694-3172433
Accession: 101722773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000003541	RTC	PF01137.21	1.8e-86	1	1
ENSHGLP00000003541	RTC_insert	PF05189.13	2.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000003596	-	1773	XM_004869126	ENSHGLP00000003541	366 (aa)	XP_004869183	G5AYQ1

Gene Model

Click here to download ENSHGLG00000002617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000002617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000002617	RTCA	100	94.262	ENSG00000137996	RTCA	100	95.918	Homo_sapiens
ENSHGLG00000002617	RTCA	99	71.468	ENSAPOG00000001345	rtca	98	71.468	Acanthochromis_polyacanthus
ENSHGLG00000002617	RTCA	73	93.309	ENSAMEG00000008855	RTCA	100	93.309	Ailuropoda_melanoleuca
ENSHGLG00000002617	RTCA	99	71.468	ENSACIG00000019643	rtca	99	71.468	Amphilophus_citrinellus
ENSHGLG00000002617	RTCA	100	70.765	ENSAOCG00000014979	rtca	99	70.765	Amphiprion_ocellaris
ENSHGLG00000002617	RTCA	100	70.765	ENSAPEG00000006945	rtca	99	70.765	Amphiprion_percula
ENSHGLG00000002617	RTCA	100	69.945	ENSATEG00000006315	rtca	100	69.945	Anabas_testudineus
ENSHGLG00000002617	RTCA	96	79.096	ENSAPLG00000015430	RTCA	100	79.096	Anas_platyrhynchos
ENSHGLG00000002617	RTCA	100	93.443	ENSANAG00000025446	RTCA	100	93.443	Aotus_nancymaae
ENSHGLG00000002617	RTCA	100	69.672	ENSACLG00000020770	rtca	99	69.672	Astatotilapia_calliptera
ENSHGLG00000002617	RTCA	100	72.404	ENSAMXG00000043271	rtca	100	72.404	Astyanax_mexicanus
ENSHGLG00000002617	RTCA	100	94.536	ENSBTAG00000006321	RTCA	100	94.536	Bos_taurus
ENSHGLG00000002617	RTCA	100	93.989	ENSCJAG00000003398	RTCA	100	93.989	Callithrix_jacchus
ENSHGLG00000002617	RTCA	100	93.443	ENSCAFG00000020010	RTCA	68	93.443	Canis_familiaris
ENSHGLG00000002617	RTCA	100	93.443	ENSCAFG00020011528	RTCA	57	93.443	Canis_lupus_dingo
ENSHGLG00000002617	RTCA	100	94.262	ENSCHIG00000018937	RTCA	100	94.262	Capra_hircus
ENSHGLG00000002617	RTCA	100	93.169	ENSTSYG00000011305	RTCA	100	93.169	Carlito_syrichta
ENSHGLG00000002617	RTCA	100	93.989	ENSCCAG00000021844	RTCA	100	93.989	Cebus_capucinus
ENSHGLG00000002617	RTCA	100	91.557	ENSCATG00000019364	RTCA	100	94.498	Cercocebus_atys
ENSHGLG00000002617	RTCA	87	94.953	ENSCLAG00000006125	RTCA	100	94.953	Chinchilla_lanigera
ENSHGLG00000002617	RTCA	100	95.082	ENSCSAG00000001509	RTCA	100	95.082	Chlorocebus_sabaeus
ENSHGLG00000002617	RTCA	100	93.716	ENSCHOG00000005211	RTCA	100	93.716	Choloepus_hoffmanni
ENSHGLG00000002617	RTCA	100	82.514	ENSCPBG00000026658	RTCA	100	82.514	Chrysemys_picta_bellii
ENSHGLG00000002617	RTCA	98	55.028	ENSCING00000007875	-	98	55.028	Ciona_intestinalis
ENSHGLG00000002617	RTCA	98	54.318	ENSCSAVG00000007269	-	98	54.318	Ciona_savignyi
ENSHGLG00000002617	RTCA	100	94.809	ENSCANG00000040106	RTCA	100	94.809	Colobus_angolensis_palliatus
ENSHGLG00000002617	RTCA	73	90.335	ENSCGRG00001013163	Rtca	85	90.335	Cricetulus_griseus_chok1gshd
ENSHGLG00000002617	RTCA	99	67.397	ENSCSEG00000000530	rtca	98	67.397	Cynoglossus_semilaevis
ENSHGLG00000002617	RTCA	100	58.197	ENSCVAG00000021809	rtca	100	58.197	Cyprinodon_variegatus
ENSHGLG00000002617	RTCA	100	72.678	ENSDARG00000002215	rtca	100	72.678	Danio_rerio
ENSHGLG00000002617	RTCA	100	93.989	ENSDNOG00000000456	RTCA	100	93.989	Dasypus_novemcinctus
ENSHGLG00000002617	RTCA	100	91.803	ENSDORG00000005448	Rtca	100	91.803	Dipodomys_ordii
ENSHGLG00000002617	RTCA	98	38.547	FBgn0025630	Rtca	98	38.547	Drosophila_melanogaster
ENSHGLG00000002617	RTCA	95	54.802	ENSEBUG00000008556	rtca	97	54.802	Eptatretus_burgeri
ENSHGLG00000002617	RTCA	100	93.716	ENSEASG00005015926	RTCA	100	93.716	Equus_asinus_asinus
ENSHGLG00000002617	RTCA	84	30.000	ENSECAG00000015973	RCL1	88	30.094	Equus_caballus
ENSHGLG00000002617	RTCA	100	93.716	ENSECAG00000019831	RTCA	100	93.716	Equus_caballus
ENSHGLG00000002617	RTCA	91	83.526	ENSEEUG00000001165	RTCA	100	83.526	Erinaceus_europaeus
ENSHGLG00000002617	RTCA	99	72.022	ENSELUG00000003741	rtca	99	72.022	Esox_lucius
ENSHGLG00000002617	RTCA	100	93.989	ENSFCAG00000024460	RTCA	100	93.989	Felis_catus
ENSHGLG00000002617	RTCA	93	80.882	ENSFALG00000002443	RTCA	91	80.882	Ficedula_albicollis
ENSHGLG00000002617	RTCA	98	75.967	ENSFDAG00000016084	-	100	75.967	Fukomys_damarensis
ENSHGLG00000002617	RTCA	100	96.448	ENSFDAG00000012070	-	100	96.448	Fukomys_damarensis
ENSHGLG00000002617	RTCA	69	60.618	ENSFHEG00000002868	rtca	96	67.699	Fundulus_heteroclitus
ENSHGLG00000002617	RTCA	100	69.945	ENSGMOG00000013264	rtca	100	69.945	Gadus_morhua
ENSHGLG00000002617	RTCA	100	81.421	ENSGALG00000005277	RTCA	100	81.421	Gallus_gallus
ENSHGLG00000002617	RTCA	100	71.311	ENSGAFG00000011853	rtca	99	71.311	Gambusia_affinis
ENSHGLG00000002617	RTCA	100	69.399	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSHGLG00000002617	RTCA	80	82.935	ENSGAGG00000023306	RTCA	100	82.935	Gopherus_agassizii
ENSHGLG00000002617	RTCA	100	94.262	ENSGGOG00000009546	-	100	94.262	Gorilla_gorilla
ENSHGLG00000002617	RTCA	100	93.443	ENSGGOG00000044018	-	100	93.443	Gorilla_gorilla
ENSHGLG00000002617	RTCA	100	69.399	ENSHBUG00000002114	rtca	99	69.399	Haplochromis_burtoni
ENSHGLG00000002617	RTCA	100	100.000	ENSHGLG00100006056	RTCA	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000002617	RTCA	100	63.388	ENSHCOG00000020628	rtca	89	63.388	Hippocampus_comes
ENSHGLG00000002617	RTCA	100	72.678	ENSIPUG00000024803	rtca	100	72.678	Ictalurus_punctatus
ENSHGLG00000002617	RTCA	100	87.158	ENSSTOG00000013528	-	100	87.158	Ictidomys_tridecemlineatus
ENSHGLG00000002617	RTCA	100	82.289	ENSSTOG00000033099	-	100	82.289	Ictidomys_tridecemlineatus
ENSHGLG00000002617	RTCA	100	67.213	ENSJJAG00000016178	Rtca	100	67.213	Jaculus_jaculus
ENSHGLG00000002617	RTCA	99	71.191	ENSKMAG00000006651	rtca	98	71.191	Kryptolebias_marmoratus
ENSHGLG00000002617	RTCA	88	68.224	ENSLBEG00000002448	-	99	68.224	Labrus_bergylta
ENSHGLG00000002617	RTCA	99	68.421	ENSLBEG00000028971	rtca	99	68.421	Labrus_bergylta
ENSHGLG00000002617	RTCA	100	76.503	ENSLACG00000013666	RTCA	100	76.503	Latimeria_chalumnae
ENSHGLG00000002617	RTCA	100	73.224	ENSLOCG00000000093	rtca	99	73.224	Lepisosteus_oculatus
ENSHGLG00000002617	RTCA	100	92.896	ENSLAFG00000001473	RTCA	100	92.896	Loxodonta_africana
ENSHGLG00000002617	RTCA	100	95.082	ENSMFAG00000034132	RTCA	100	95.082	Macaca_fascicularis
ENSHGLG00000002617	RTCA	100	95.082	ENSMMUG00000019105	RTCA	100	95.082	Macaca_mulatta
ENSHGLG00000002617	RTCA	84	94.822	ENSMNEG00000037163	RTCA	100	94.822	Macaca_nemestrina
ENSHGLG00000002617	RTCA	100	77.596	ENSMLEG00000042151	RTCA	100	77.596	Mandrillus_leucophaeus
ENSHGLG00000002617	RTCA	100	71.858	ENSMAMG00000016536	rtca	100	71.858	Mastacembelus_armatus
ENSHGLG00000002617	RTCA	100	69.672	ENSMZEG00005017945	rtca	99	69.672	Maylandia_zebra
ENSHGLG00000002617	RTCA	87	80.251	ENSMGAG00000006892	RTCA	99	80.251	Meleagris_gallopavo
ENSHGLG00000002617	RTCA	100	90.164	ENSMAUG00000008488	Rtca	100	90.164	Mesocricetus_auratus
ENSHGLG00000002617	RTCA	84	94.822	ENSMICG00000008643	RTCA	100	94.822	Microcebus_murinus
ENSHGLG00000002617	RTCA	100	90.984	ENSMOCG00000016660	Rtca	100	90.984	Microtus_ochrogaster
ENSHGLG00000002617	RTCA	84	70.874	ENSMMOG00000007750	rtca	100	70.874	Mola_mola
ENSHGLG00000002617	RTCA	100	88.798	ENSMODG00000003557	RTCA	100	88.798	Monodelphis_domestica
ENSHGLG00000002617	RTCA	100	71.585	ENSMALG00000020844	rtca	100	71.585	Monopterus_albus
ENSHGLG00000002617	RTCA	100	90.710	MGP_CAROLIEiJ_G0025565	Rtca	100	90.710	Mus_caroli
ENSHGLG00000002617	RTCA	100	90.164	ENSMUSG00000000339	Rtca	100	90.164	Mus_musculus
ENSHGLG00000002617	RTCA	100	90.984	MGP_PahariEiJ_G0027011	Rtca	100	90.984	Mus_pahari
ENSHGLG00000002617	RTCA	100	90.437	MGP_SPRETEiJ_G0026515	Rtca	100	90.437	Mus_spretus
ENSHGLG00000002617	RTCA	100	93.989	ENSMPUG00000012119	RTCA	100	93.989	Mustela_putorius_furo
ENSHGLG00000002617	RTCA	100	87.466	ENSMLUG00000009922	RTCA	100	87.466	Myotis_lucifugus
ENSHGLG00000002617	RTCA	100	90.164	ENSNGAG00000011540	Rtca	99	90.164	Nannospalax_galili
ENSHGLG00000002617	RTCA	100	69.672	ENSNBRG00000003062	rtca	99	69.672	Neolamprologus_brichardi
ENSHGLG00000002617	RTCA	100	94.262	ENSNLEG00000031426	RTCA	100	94.262	Nomascus_leucogenys
ENSHGLG00000002617	RTCA	58	92.683	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSHGLG00000002617	RTCA	73	86.989	ENSOPRG00000012092	RTCA	71	86.989	Ochotona_princeps
ENSHGLG00000002617	RTCA	95	93.966	ENSODEG00000006990	RTCA	96	94.017	Octodon_degus
ENSHGLG00000002617	RTCA	100	69.672	ENSONIG00000007753	rtca	99	69.672	Oreochromis_niloticus
ENSHGLG00000002617	RTCA	87	86.120	ENSOANG00000012055	RTCA	98	86.120	Ornithorhynchus_anatinus
ENSHGLG00000002617	RTCA	100	94.809	ENSOCUG00000014247	RTCA	100	94.809	Oryctolagus_cuniculus
ENSHGLG00000002617	RTCA	100	69.945	ENSORLG00000013605	rtca	100	69.945	Oryzias_latipes
ENSHGLG00000002617	RTCA	100	69.945	ENSORLG00020001904	rtca	100	69.945	Oryzias_latipes_hni
ENSHGLG00000002617	RTCA	100	69.945	ENSORLG00015021064	rtca	100	69.945	Oryzias_latipes_hsok
ENSHGLG00000002617	RTCA	100	70.765	ENSOMEG00000000756	rtca	100	70.765	Oryzias_melastigma
ENSHGLG00000002617	RTCA	100	84.153	ENSOGAG00000005627	RTCA	100	84.153	Otolemur_garnettii
ENSHGLG00000002617	RTCA	87	93.082	ENSOARG00000018122	RTCA	100	93.082	Ovis_aries
ENSHGLG00000002617	RTCA	100	90.501	ENSPPAG00000035119	RTCA	100	93.528	Pan_paniscus
ENSHGLG00000002617	RTCA	100	94.262	ENSPPRG00000000350	RTCA	100	94.262	Panthera_pardus
ENSHGLG00000002617	RTCA	100	93.716	ENSPTIG00000012816	RTCA	100	93.716	Panthera_tigris_altaica
ENSHGLG00000002617	RTCA	100	90.501	ENSPTRG00000001004	RTCA	100	93.528	Pan_troglodytes
ENSHGLG00000002617	RTCA	100	94.809	ENSPANG00000000346	RTCA	100	94.809	Papio_anubis
ENSHGLG00000002617	RTCA	100	73.224	ENSPKIG00000001653	rtca	100	73.224	Paramormyrops_kingsleyae
ENSHGLG00000002617	RTCA	100	82.240	ENSPSIG00000011408	RTCA	100	82.240	Pelodiscus_sinensis
ENSHGLG00000002617	RTCA	100	91.257	ENSPEMG00000018582	Rtca	100	91.257	Peromyscus_maniculatus_bairdii
ENSHGLG00000002617	RTCA	100	58.856	ENSPMAG00000009110	rtca	100	58.856	Petromyzon_marinus
ENSHGLG00000002617	RTCA	100	89.071	ENSPCIG00000007684	RTCA	100	89.071	Phascolarctos_cinereus
ENSHGLG00000002617	RTCA	100	71.662	ENSPFOG00000004824	rtca	100	71.662	Poecilia_formosa
ENSHGLG00000002617	RTCA	100	71.858	ENSPLAG00000011753	rtca	99	71.858	Poecilia_latipinna
ENSHGLG00000002617	RTCA	100	71.858	ENSPMEG00000020469	rtca	99	71.858	Poecilia_mexicana
ENSHGLG00000002617	RTCA	100	72.678	ENSPREG00000001365	rtca	99	72.678	Poecilia_reticulata
ENSHGLG00000002617	RTCA	100	94.262	ENSPPYG00000001115	RTCA	100	94.262	Pongo_abelii
ENSHGLG00000002617	RTCA	100	90.710	ENSPCAG00000005076	RTCA	100	90.710	Procavia_capensis
ENSHGLG00000002617	RTCA	100	94.809	ENSPCOG00000005603	RTCA	100	94.809	Propithecus_coquereli
ENSHGLG00000002617	RTCA	100	88.918	ENSPVAG00000009478	RTCA	100	88.918	Pteropus_vampyrus
ENSHGLG00000002617	RTCA	100	69.672	ENSPNYG00000004722	rtca	99	69.672	Pundamilia_nyererei
ENSHGLG00000002617	RTCA	100	72.131	ENSPNAG00000022270	rtca	100	72.131	Pygocentrus_nattereri
ENSHGLG00000002617	RTCA	100	90.710	ENSRNOG00000014575	Rtca	100	90.710	Rattus_norvegicus
ENSHGLG00000002617	RTCA	100	91.029	ENSRBIG00000041180	RTCA	100	93.851	Rhinopithecus_bieti
ENSHGLG00000002617	RTCA	100	94.262	ENSRROG00000024929	RTCA	100	94.262	Rhinopithecus_roxellana
ENSHGLG00000002617	RTCA	100	93.169	ENSSBOG00000028626	RTCA	100	93.169	Saimiri_boliviensis_boliviensis
ENSHGLG00000002617	RTCA	100	89.344	ENSSHAG00000001758	RTCA	100	89.344	Sarcophilus_harrisii
ENSHGLG00000002617	RTCA	98	68.889	ENSSMAG00000014680	rtca	97	68.889	Scophthalmus_maximus
ENSHGLG00000002617	RTCA	98	70.833	ENSSDUG00000015585	rtca	97	70.833	Seriola_dumerili
ENSHGLG00000002617	RTCA	96	71.510	ENSSLDG00000018985	rtca	95	71.510	Seriola_lalandi_dorsalis
ENSHGLG00000002617	RTCA	87	83.912	ENSSARG00000013993	RTCA	100	83.912	Sorex_araneus
ENSHGLG00000002617	RTCA	100	69.945	ENSSPAG00000011938	rtca	99	69.945	Stegastes_partitus
ENSHGLG00000002617	RTCA	100	93.716	ENSSSCG00000006865	RTCA	100	93.716	Sus_scrofa
ENSHGLG00000002617	RTCA	100	82.240	ENSTGUG00000005154	RTCA	100	82.240	Taeniopygia_guttata
ENSHGLG00000002617	RTCA	100	70.219	ENSTRUG00000008799	rtca	100	70.219	Takifugu_rubripes
ENSHGLG00000002617	RTCA	100	71.585	ENSTNIG00000004725	rtca	100	71.585	Tetraodon_nigroviridis
ENSHGLG00000002617	RTCA	59	80.000	ENSTBEG00000000943	RTCA	82	68.067	Tupaia_belangeri
ENSHGLG00000002617	RTCA	100	89.974	ENSTTRG00000015327	RTCA	100	89.974	Tursiops_truncatus
ENSHGLG00000002617	RTCA	94	91.254	ENSUAMG00000017265	RTCA	96	91.254	Ursus_americanus
ENSHGLG00000002617	RTCA	100	92.896	ENSUMAG00000007881	RTCA	100	92.896	Ursus_maritimus
ENSHGLG00000002617	RTCA	87	83.281	ENSVPAG00000001039	RTCA	84	83.281	Vicugna_pacos
ENSHGLG00000002617	RTCA	100	93.169	ENSVVUG00000022041	RTCA	68	93.169	Vulpes_vulpes
ENSHGLG00000002617	RTCA	99	63.488	ENSXETG00000031661	RTCA	99	63.488	Xenopus_tropicalis
ENSHGLG00000002617	RTCA	100	62.295	ENSXCOG00000008002	rtca	100	62.295	Xiphophorus_couchianus
ENSHGLG00000002617	RTCA	100	71.585	ENSXMAG00000005482	rtca	99	71.585	Xiphophorus_maculatus