EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000002798 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 3392 bases
Position: chrJH602217.1:2517661-2521052
Accession: 101699586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000003803	zf-U11-48K	PF05253.12	5.7e-20	1	2
ENSHGLP00000003803	zf-U11-48K	PF05253.12	5.7e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000003859	-	462	XM_004872826	ENSHGLP00000003803	153 (aa)	XP_004872883	-

Gene Model

Click here to download ENSHGLG00000002798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000002798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000002798	-	64	33.673	ENSHGLG00000002436	GTSF1	56	33.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000002798	-	95	80.272	ENSAMEG00000000958	-	93	80.420	Ailuropoda_melanoleuca
ENSHGLG00000002798	-	100	76.129	ENSCAFG00000006463	-	92	78.322	Canis_familiaris
ENSHGLG00000002798	-	99	75.163	ENSCAFG00020020371	-	91	78.322	Canis_lupus_dingo
ENSHGLG00000002798	-	97	80.000	ENSCPOG00000023851	-	95	81.818	Cavia_porcellus
ENSHGLG00000002798	-	95	78.231	ENSCLAG00000008579	-	97	79.577	Chinchilla_lanigera
ENSHGLG00000002798	-	95	70.068	ENSCGRG00001016136	Gtsf2	92	70.629	Cricetulus_griseus_chok1gshd
ENSHGLG00000002798	-	95	70.068	ENSCGRG00000012950	Gtsf2	92	70.629	Cricetulus_griseus_crigri
ENSHGLG00000002798	-	100	72.903	ENSDORG00000026087	Gtsf2	92	74.126	Dipodomys_ordii
ENSHGLG00000002798	-	69	68.224	ENSEASG00005010262	-	98	68.224	Equus_asinus_asinus
ENSHGLG00000002798	-	69	75.472	ENSECAG00000014413	-	98	75.472	Equus_caballus
ENSHGLG00000002798	-	69	76.415	ENSFCAG00000031316	-	91	76.415	Felis_catus
ENSHGLG00000002798	-	97	88.591	ENSFDAG00000019555	-	95	90.141	Fukomys_damarensis
ENSHGLG00000002798	-	100	100.000	ENSHGLG00100012359	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000002798	-	95	74.830	ENSSTOG00000030158	-	91	76.642	Ictidomys_tridecemlineatus
ENSHGLG00000002798	-	99	69.935	ENSJJAG00000016320	Gtsf2	92	72.028	Jaculus_jaculus
ENSHGLG00000002798	-	52	74.684	ENSMAUG00000014687	-	87	74.684	Mesocricetus_auratus
ENSHGLG00000002798	-	99	71.242	ENSMAUG00000017189	-	88	74.126	Mesocricetus_auratus
ENSHGLG00000002798	-	95	70.068	ENSMOCG00000014770	Gtsf2	92	71.329	Microtus_ochrogaster
ENSHGLG00000002798	-	95	70.068	MGP_CAROLIEiJ_G0020380	Gtsf2	92	70.629	Mus_caroli
ENSHGLG00000002798	-	95	70.748	ENSMUSG00000053508	Gtsf2	92	71.329	Mus_musculus
ENSHGLG00000002798	-	100	69.032	MGP_PahariEiJ_G0020379	Gtsf2	92	72.028	Mus_pahari
ENSHGLG00000002798	-	95	70.748	MGP_SPRETEiJ_G0021273	Gtsf2	92	71.329	Mus_spretus
ENSHGLG00000002798	-	100	76.774	ENSMPUG00000005664	-	92	79.021	Mustela_putorius_furo
ENSHGLG00000002798	-	99	64.052	ENSNGAG00000008752	Gtsf2	92	65.734	Nannospalax_galili
ENSHGLG00000002798	-	97	76.000	ENSODEG00000013228	-	95	76.224	Octodon_degus
ENSHGLG00000002798	-	82	77.953	ENSPPRG00000004157	-	99	77.953	Panthera_pardus
ENSHGLG00000002798	-	82	77.953	ENSPTIG00000020670	-	99	77.953	Panthera_tigris_altaica
ENSHGLG00000002798	-	90	69.784	ENSPEMG00000014641	-	100	65.487	Peromyscus_maniculatus_bairdii
ENSHGLG00000002798	-	95	73.469	ENSPEMG00000010828	-	92	74.126	Peromyscus_maniculatus_bairdii
ENSHGLG00000002798	-	95	70.068	ENSRNOG00000036830	RGD1563200	92	70.629	Rattus_norvegicus
ENSHGLG00000002798	-	98	60.667	ENSSSCG00000000296	-	86	61.972	Sus_scrofa
ENSHGLG00000002798	-	69	80.189	ENSUAMG00000021668	-	97	80.189	Ursus_americanus
ENSHGLG00000002798	-	69	80.189	ENSUMAG00000011281	-	97	80.189	Ursus_maritimus
ENSHGLG00000002798	-	69	78.302	ENSVVUG00000023684	-	97	78.302	Vulpes_vulpes