EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000002808 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 2647 bases
Position: chrJH602152.1:4857744-4860390
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000003813	KH_1	PF00013.29	8.9e-62	1	4
ENSHGLP00000003813	KH_1	PF00013.29	8.9e-62	2	4
ENSHGLP00000003813	KH_1	PF00013.29	8.9e-62	3	4
ENSHGLP00000003813	KH_1	PF00013.29	8.9e-62	4	4
ENSHGLP00000003814	KH_1	PF00013.29	9.1e-62	1	4
ENSHGLP00000003814	KH_1	PF00013.29	9.1e-62	2	4
ENSHGLP00000003814	KH_1	PF00013.29	9.1e-62	3	4
ENSHGLP00000003814	KH_1	PF00013.29	9.1e-62	4	4
ENSHGLP00000003813	KH_2	PF07650.17	3.1e-19	1	1
ENSHGLP00000003814	KH_2	PF07650.17	3.2e-19	1	1
ENSHGLP00000003814	DUF1897	PF09005.10	1.9e-12	1	2
ENSHGLP00000003814	DUF1897	PF09005.10	1.9e-12	2	2
ENSHGLP00000003813	DUF1897	PF09005.10	1.9e-12	1	2
ENSHGLP00000003813	DUF1897	PF09005.10	1.9e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000003871	-	1878	-	ENSHGLP00000003814	625 (aa)	-	-
ENSHGLT00000003870	-	1875	-	ENSHGLP00000003813	624 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000002808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000002808's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000002808	-	92	48.966	ENSHGLG00000014728	-	70	56.280
ENSHGLG00000002808	-	56	32.143	ENSHGLG00000018620	PCBP3	66	32.143
ENSHGLG00000002808	-	72	91.447	ENSHGLG00000008415	-	87	92.593
ENSHGLG00000002808	-	93	56.044	ENSHGLG00000013239	KHSRP	66	61.845
ENSHGLG00000002808	-	58	32.143	ENSHGLG00000012018	PCBP4	74	32.143
ENSHGLG00000002808	-	93	52.685	ENSHGLG00000014381	-	72	60.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000002808	-	72	91.209	ENSG00000162613	FUBP1	100	84.188	Homo_sapiens
ENSHGLG00000002808	-	99	63.833	ENSAPOG00000014845	fubp1	71	71.398	Acanthochromis_polyacanthus
ENSHGLG00000002808	-	72	86.848	ENSAMEG00000007372	FUBP1	73	87.090	Ailuropoda_melanoleuca
ENSHGLG00000002808	-	100	62.423	ENSACIG00000020024	fubp1	71	69.481	Amphilophus_citrinellus
ENSHGLG00000002808	-	100	65.331	ENSATEG00000018619	fubp1	72	73.856	Anabas_testudineus
ENSHGLG00000002808	-	66	91.525	ENSAPLG00000005965	FUBP1	70	92.654	Anas_platyrhynchos
ENSHGLG00000002808	-	71	84.355	ENSACAG00000006310	FUBP1	96	75.510	Anolis_carolinensis
ENSHGLG00000002808	-	99	65.426	ENSACLG00000006708	fubp1	73	73.420	Astatotilapia_calliptera
ENSHGLG00000002808	-	94	69.794	ENSAMXG00000005525	fubp1	66	79.320	Astyanax_mexicanus
ENSHGLG00000002808	-	72	91.429	ENSCJAG00000007062	FUBP1	72	91.595	Callithrix_jacchus
ENSHGLG00000002808	-	72	91.228	ENSCAFG00000020361	FUBP1	72	91.398	Canis_familiaris
ENSHGLG00000002808	-	66	91.304	ENSTSYG00000000148	FUBP1	90	79.374	Carlito_syrichta
ENSHGLG00000002808	-	59	93.040	ENSCAPG00000011052	-	67	93.040	Cavia_aperea
ENSHGLG00000002808	-	72	91.447	ENSCPOG00000002757	FUBP1	70	91.613	Cavia_porcellus
ENSHGLG00000002808	-	75	91.270	ENSCCAG00000036537	FUBP1	100	78.736	Cebus_capucinus
ENSHGLG00000002808	-	72	91.009	ENSCATG00000042126	FUBP1	72	91.183	Cercocebus_atys
ENSHGLG00000002808	-	72	91.447	ENSCLAG00000005621	FUBP1	87	92.593	Chinchilla_lanigera
ENSHGLG00000002808	-	72	91.009	ENSCSAG00000001402	FUBP1	72	91.183	Chlorocebus_sabaeus
ENSHGLG00000002808	-	72	91.009	ENSCHOG00000008177	FUBP1	71	91.183	Choloepus_hoffmanni
ENSHGLG00000002808	-	72	90.110	ENSCGRG00001007103	Fubp1	71	91.503	Cricetulus_griseus_chok1gshd
ENSHGLG00000002808	-	66	91.546	ENSCGRG00000003372	Fubp1	84	93.600	Cricetulus_griseus_crigri
ENSHGLG00000002808	-	100	64.110	ENSCSEG00000021412	fubp1	72	71.922	Cynoglossus_semilaevis
ENSHGLG00000002808	-	99	62.018	ENSCVAG00000014487	fubp1	62	78.788	Cyprinodon_variegatus
ENSHGLG00000002808	-	72	70.905	ENSDARG00000029248	fubp1	72	71.125	Danio_rerio
ENSHGLG00000002808	-	86	70.513	ENSDNOG00000034565	-	84	63.736	Dasypus_novemcinctus
ENSHGLG00000002808	-	72	91.228	ENSDORG00000016534	Fubp1	99	86.834	Dipodomys_ordii
ENSHGLG00000002808	-	78	93.275	ENSETEG00000000948	-	59	93.275	Echinops_telfairi
ENSHGLG00000002808	-	82	51.056	ENSEBUG00000016143	fubp1	79	46.909	Eptatretus_burgeri
ENSHGLG00000002808	-	74	90.816	ENSEEUG00000001287	FUBP1	61	91.837	Erinaceus_europaeus
ENSHGLG00000002808	-	100	63.382	ENSELUG00000007990	fubp1	72	69.723	Esox_lucius
ENSHGLG00000002808	-	72	89.451	ENSFALG00000005768	FUBP1	70	90.217	Ficedula_albicollis
ENSHGLG00000002808	-	72	91.228	ENSFDAG00000014210	FUBP1	86	93.600	Fukomys_damarensis
ENSHGLG00000002808	-	100	60.947	ENSFHEG00000005230	fubp1	72	73.650	Fundulus_heteroclitus
ENSHGLG00000002808	-	100	59.692	ENSGMOG00000003370	fubp1	71	65.510	Gadus_morhua
ENSHGLG00000002808	-	72	89.693	ENSGALG00000008939	FUBP1	78	91.529	Gallus_gallus
ENSHGLG00000002808	-	100	62.150	ENSGAFG00000020972	fubp1	100	64.625	Gambusia_affinis
ENSHGLG00000002808	-	100	64.231	ENSGACG00000016563	fubp1	71	71.828	Gasterosteus_aculeatus
ENSHGLG00000002808	-	100	63.650	ENSHBUG00000009835	fubp1	87	71.645	Haplochromis_burtoni
ENSHGLG00000002808	-	100	99.362	ENSHGLG00100001414	-	100	99.362	Heterocephalus_glaber_male
ENSHGLG00000002808	-	72	91.447	ENSHGLG00100003417	-	72	91.613	Heterocephalus_glaber_male
ENSHGLG00000002808	-	100	61.699	ENSHCOG00000000910	fubp1	72	69.811	Hippocampus_comes
ENSHGLG00000002808	-	100	67.073	ENSIPUG00000009896	fubp1	72	72.668	Ictalurus_punctatus
ENSHGLG00000002808	-	72	91.429	ENSSTOG00000014312	FUBP1	72	91.595	Ictidomys_tridecemlineatus
ENSHGLG00000002808	-	72	91.429	ENSJJAG00000020069	Fubp1	86	93.600	Jaculus_jaculus
ENSHGLG00000002808	-	100	63.804	ENSKMAG00000018897	fubp1	100	65.217	Kryptolebias_marmoratus
ENSHGLG00000002808	-	100	62.577	ENSLBEG00000012700	fubp1	98	62.969	Labrus_bergylta
ENSHGLG00000002808	-	72	71.069	ENSLOCG00000003745	fubp1	70	71.369	Lepisosteus_oculatus
ENSHGLG00000002808	-	72	86.792	ENSLAFG00000003273	FUBP1	100	84.865	Loxodonta_africana
ENSHGLG00000002808	-	72	91.209	ENSMFAG00000031825	FUBP1	72	91.379	Macaca_fascicularis
ENSHGLG00000002808	-	72	91.209	ENSMMUG00000002899	FUBP1	72	91.183	Macaca_mulatta
ENSHGLG00000002808	-	72	91.009	ENSMNEG00000045212	FUBP1	72	91.183	Macaca_nemestrina
ENSHGLG00000002808	-	100	64.931	ENSMZEG00005024298	fubp1	72	74.082	Maylandia_zebra
ENSHGLG00000002808	-	66	90.580	ENSMGAG00000009424	FUBP1	70	91.253	Meleagris_gallopavo
ENSHGLG00000002808	-	72	90.789	ENSMAUG00000016428	Fubp1	99	80.560	Mesocricetus_auratus
ENSHGLG00000002808	-	71	91.556	ENSMOCG00000014751	Fubp1	70	91.939	Microtus_ochrogaster
ENSHGLG00000002808	-	84	66.849	ENSMMOG00000019463	fubp1	99	67.093	Mola_mola
ENSHGLG00000002808	-	68	80.984	ENSMODG00000020804	FUBP1	100	76.235	Monodelphis_domestica
ENSHGLG00000002808	-	100	64.373	ENSMALG00000015173	fubp1	72	72.570	Monopterus_albus
ENSHGLG00000002808	-	71	91.314	MGP_CAROLIEiJ_G0025740	Fubp1	100	86.275	Mus_caroli
ENSHGLG00000002808	-	71	91.091	ENSMUSG00000028034	Fubp1	100	86.275	Mus_musculus
ENSHGLG00000002808	-	71	91.333	MGP_PahariEiJ_G0027191	Fubp1	100	84.936	Mus_pahari
ENSHGLG00000002808	-	71	91.314	MGP_SPRETEiJ_G0026693	Fubp1	100	86.275	Mus_spretus
ENSHGLG00000002808	-	72	86.667	ENSMLUG00000014802	FUBP1	72	87.037	Myotis_lucifugus
ENSHGLG00000002808	-	72	84.868	ENSNGAG00000014302	Fubp1	63	95.745	Nannospalax_galili
ENSHGLG00000002808	-	100	62.636	ENSNBRG00000015099	fubp1	73	73.420	Neolamprologus_brichardi
ENSHGLG00000002808	-	72	85.558	ENSNLEG00000009772	FUBP1	72	85.837	Nomascus_leucogenys
ENSHGLG00000002808	-	56	97.674	ENSMEUG00000007917	-	78	97.674	Notamacropus_eugenii
ENSHGLG00000002808	-	89	91.200	ENSOPRG00000001175	FUBP1	71	91.453	Ochotona_princeps
ENSHGLG00000002808	-	72	91.447	ENSODEG00000002600	-	86	93.600	Octodon_degus
ENSHGLG00000002808	-	99	61.224	ENSODEG00000003657	-	73	65.284	Octodon_degus
ENSHGLG00000002808	-	99	63.964	ENSONIG00000018381	fubp1	71	74.082	Oreochromis_niloticus
ENSHGLG00000002808	-	99	63.205	ENSORLG00020005908	fubp1	72	73.203	Oryzias_latipes_hni
ENSHGLG00000002808	-	100	63.220	ENSORLG00015008779	fubp1	72	73.203	Oryzias_latipes_hsok
ENSHGLG00000002808	-	72	73.230	ENSOMEG00000021943	fubp1	72	71.739	Oryzias_melastigma
ENSHGLG00000002808	-	72	86.486	ENSOGAG00000014233	FUBP1	100	74.170	Otolemur_garnettii
ENSHGLG00000002808	-	72	91.429	ENSOARG00000013259	FUBP1	100	81.203	Ovis_aries
ENSHGLG00000002808	-	72	91.228	ENSPPRG00000000413	FUBP1	72	91.398	Panthera_pardus
ENSHGLG00000002808	-	72	91.228	ENSPTIG00000019450	FUBP1	72	91.398	Panthera_tigris_altaica
ENSHGLG00000002808	-	67	89.976	ENSPSIG00000012965	FUBP1	69	92.195	Pelodiscus_sinensis
ENSHGLG00000002808	-	99	65.211	ENSPMGG00000009060	fubp1	72	72.668	Periophthalmus_magnuspinnatus
ENSHGLG00000002808	-	72	89.912	ENSPEMG00000021802	Fubp1	70	91.503	Peromyscus_maniculatus_bairdii
ENSHGLG00000002808	-	64	57.692	ENSPMAG00000001644	-	90	58.559	Petromyzon_marinus
ENSHGLG00000002808	-	72	71.366	ENSPLAG00000021170	fubp1	74	73.856	Poecilia_latipinna
ENSHGLG00000002808	-	99	65.149	ENSPMEG00000004747	fubp1	75	73.650	Poecilia_mexicana
ENSHGLG00000002808	-	100	62.130	ENSPREG00000017911	fubp1	99	67.603	Poecilia_reticulata
ENSHGLG00000002808	-	79	91.342	ENSPPYG00000001219	-	69	91.558	Pongo_abelii
ENSHGLG00000002808	-	72	90.789	ENSPCAG00000012617	FUBP1	71	90.968	Procavia_capensis
ENSHGLG00000002808	-	72	91.228	ENSPCOG00000024974	FUBP1	72	91.398	Propithecus_coquereli
ENSHGLG00000002808	-	72	85.088	ENSPVAG00000014637	FUBP1	71	85.376	Pteropus_vampyrus
ENSHGLG00000002808	-	100	65.300	ENSPNYG00000004552	fubp1	75	74.074	Pundamilia_nyererei
ENSHGLG00000002808	-	100	65.089	ENSPNAG00000016207	fubp1	90	71.429	Pygocentrus_nattereri
ENSHGLG00000002808	-	71	91.537	ENSRNOG00000043370	Fubp1	71	91.921	Rattus_norvegicus
ENSHGLG00000002808	-	72	91.009	ENSRBIG00000042950	FUBP1	72	91.183	Rhinopithecus_bieti
ENSHGLG00000002808	-	72	91.009	ENSRROG00000043534	FUBP1	72	91.183	Rhinopithecus_roxellana
ENSHGLG00000002808	-	72	91.228	ENSSBOG00000027299	FUBP1	98	86.226	Saimiri_boliviensis_boliviensis
ENSHGLG00000002808	-	66	90.191	ENSSHAG00000005367	FUBP1	100	81.947	Sarcophilus_harrisii
ENSHGLG00000002808	-	72	73.510	ENSSFOG00015010213	fubp1	99	63.581	Scleropages_formosus
ENSHGLG00000002808	-	99	64.157	ENSSDUG00000007383	fubp1	69	72.340	Seriola_dumerili
ENSHGLG00000002808	-	100	64.264	ENSSLDG00000022863	fubp1	75	72.152	Seriola_lalandi_dorsalis
ENSHGLG00000002808	-	89	93.162	ENSSARG00000011730	FUBP1	60	93.162	Sorex_araneus
ENSHGLG00000002808	-	99	79.394	ENSSPUG00000008389	FUBP1	100	76.239	Sphenodon_punctatus
ENSHGLG00000002808	-	99	65.736	ENSSPAG00000010161	fubp1	71	73.203	Stegastes_partitus
ENSHGLG00000002808	-	66	89.976	ENSTGUG00000006841	FUBP1	70	91.121	Taeniopygia_guttata
ENSHGLG00000002808	-	97	62.921	ENSTRUG00000004615	fubp1	100	65.366	Takifugu_rubripes
ENSHGLG00000002808	-	54	79.730	ENSTNIG00000019815	-	88	79.730	Tetraodon_nigroviridis
ENSHGLG00000002808	-	84	95.726	ENSTBEG00000017333	FUBP1	66	95.726	Tupaia_belangeri
ENSHGLG00000002808	-	72	91.228	ENSTTRG00000000096	FUBP1	99	82.424	Tursiops_truncatus
ENSHGLG00000002808	-	72	91.228	ENSVPAG00000004709	FUBP1	99	83.283	Vicugna_pacos
ENSHGLG00000002808	-	100	64.286	ENSXCOG00000019354	fubp1	74	72.331	Xiphophorus_couchianus
ENSHGLG00000002808	-	97	63.492	ENSXMAG00000007168	fubp1	99	68.561	Xiphophorus_maculatus