EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000002848 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 6829 bases
Position: chrJH602138.1:4708093-4714921
Accession: 101709711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000003860	Exo_endo_phos	PF03372.23	3.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000003918	-	5291	XM_004865000	ENSHGLP00000003860	318 (aa)	XP_004865057	G5B5Q8

Gene Model

Click here to download ENSHGLG00000002848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000002848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000002848	APEX1	100	94.340	ENSG00000100823	APEX1	100	94.340	Homo_sapiens
ENSHGLG00000002848	APEX1	88	69.892	ENSAPOG00000017002	apex1	94	68.858	Acanthochromis_polyacanthus
ENSHGLG00000002848	APEX1	100	96.855	ENSAMEG00000005418	APEX1	100	96.855	Ailuropoda_melanoleuca
ENSHGLG00000002848	APEX1	87	71.942	ENSACIG00000010653	apex1	97	70.588	Amphilophus_citrinellus
ENSHGLG00000002848	APEX1	88	69.534	ENSAOCG00000009649	apex1	93	68.512	Amphiprion_ocellaris
ENSHGLG00000002848	APEX1	88	69.534	ENSAPEG00000021453	apex1	93	68.512	Amphiprion_percula
ENSHGLG00000002848	APEX1	86	72.000	ENSATEG00000002883	apex1	97	68.354	Anabas_testudineus
ENSHGLG00000002848	APEX1	100	71.118	ENSACAG00000008099	APEX1	100	71.118	Anolis_carolinensis
ENSHGLG00000002848	APEX1	100	94.654	ENSANAG00000030117	APEX1	100	94.654	Aotus_nancymaae
ENSHGLG00000002848	APEX1	87	72.101	ENSACLG00000018441	apex1	99	66.772	Astatotilapia_calliptera
ENSHGLG00000002848	APEX1	100	65.625	ENSAMXG00000034699	apex1	100	65.625	Astyanax_mexicanus
ENSHGLG00000002848	APEX1	100	95.283	ENSBTAG00000002745	APEX1	100	95.283	Bos_taurus
ENSHGLG00000002848	APEX1	84	43.911	WBGene00001372	exo-3	93	43.911	Caenorhabditis_elegans
ENSHGLG00000002848	APEX1	100	95.283	ENSCJAG00000009726	APEX1	100	95.283	Callithrix_jacchus
ENSHGLG00000002848	APEX1	100	94.025	ENSCAFG00000032033	APEX1	100	94.025	Canis_familiaris
ENSHGLG00000002848	APEX1	100	94.025	ENSCAFG00020014377	-	100	94.025	Canis_lupus_dingo
ENSHGLG00000002848	APEX1	54	90.116	ENSCAFG00020023002	-	96	90.116	Canis_lupus_dingo
ENSHGLG00000002848	APEX1	98	76.282	ENSCHIG00000014537	-	99	76.282	Capra_hircus
ENSHGLG00000002848	APEX1	100	94.654	ENSCHIG00000007298	-	100	94.654	Capra_hircus
ENSHGLG00000002848	APEX1	100	95.283	ENSTSYG00000034813	APEX1	100	95.283	Carlito_syrichta
ENSHGLG00000002848	APEX1	85	89.299	ENSCAPG00000016235	APEX1	91	98.305	Cavia_aperea
ENSHGLG00000002848	APEX1	100	97.170	ENSCPOG00000030909	APEX1	100	97.170	Cavia_porcellus
ENSHGLG00000002848	APEX1	100	82.075	ENSCCAG00000031931	-	100	82.075	Cebus_capucinus
ENSHGLG00000002848	APEX1	100	95.283	ENSCCAG00000033056	-	100	95.283	Cebus_capucinus
ENSHGLG00000002848	APEX1	100	94.025	ENSCATG00000015580	APEX1	100	94.025	Cercocebus_atys
ENSHGLG00000002848	APEX1	100	97.799	ENSCLAG00000001002	APEX1	100	97.799	Chinchilla_lanigera
ENSHGLG00000002848	APEX1	100	93.711	ENSCSAG00000016685	-	100	93.711	Chlorocebus_sabaeus
ENSHGLG00000002848	APEX1	100	93.711	ENSCSAG00000016670	-	100	93.711	Chlorocebus_sabaeus
ENSHGLG00000002848	APEX1	100	71.473	ENSCPBG00000009567	APEX1	100	71.473	Chrysemys_picta_bellii
ENSHGLG00000002848	APEX1	95	54.545	ENSCING00000008137	-	97	54.545	Ciona_intestinalis
ENSHGLG00000002848	APEX1	94	49.833	ENSCSAVG00000007144	-	100	52.896	Ciona_savignyi
ENSHGLG00000002848	APEX1	100	94.340	ENSCANG00000030726	APEX1	100	94.340	Colobus_angolensis_palliatus
ENSHGLG00000002848	APEX1	100	91.509	ENSCGRG00001017046	Apex1	100	91.509	Cricetulus_griseus_chok1gshd
ENSHGLG00000002848	APEX1	100	91.509	ENSCGRG00000008984	Apex1	100	91.509	Cricetulus_griseus_crigri
ENSHGLG00000002848	APEX1	99	64.353	ENSCSEG00000017499	apex1	99	64.353	Cynoglossus_semilaevis
ENSHGLG00000002848	APEX1	88	71.685	ENSCVAG00000022075	apex1	99	66.772	Cyprinodon_variegatus
ENSHGLG00000002848	APEX1	100	66.352	ENSDARG00000045843	apex1	100	67.610	Danio_rerio
ENSHGLG00000002848	APEX1	100	89.937	ENSDNOG00000042234	APEX1	95	89.937	Dasypus_novemcinctus
ENSHGLG00000002848	APEX1	100	95.283	ENSDORG00000001616	Apex1	100	95.283	Dipodomys_ordii
ENSHGLG00000002848	APEX1	100	93.396	ENSETEG00000004855	-	100	93.396	Echinops_telfairi
ENSHGLG00000002848	APEX1	75	65.272	ENSEBUG00000000622	-	92	65.272	Eptatretus_burgeri
ENSHGLG00000002848	APEX1	100	96.226	ENSEASG00005017489	APEX1	74	96.226	Equus_asinus_asinus
ENSHGLG00000002848	APEX1	100	96.226	ENSECAG00000022325	APEX1	82	96.226	Equus_caballus
ENSHGLG00000002848	APEX1	91	94.097	ENSEEUG00000012569	APEX1	100	94.097	Erinaceus_europaeus
ENSHGLG00000002848	APEX1	100	66.352	ENSELUG00000021706	apex1	100	66.352	Esox_lucius
ENSHGLG00000002848	APEX1	100	97.170	ENSFCAG00000030869	APEX1	100	97.170	Felis_catus
ENSHGLG00000002848	APEX1	100	98.113	ENSFDAG00000006120	APEX1	100	98.113	Fukomys_damarensis
ENSHGLG00000002848	APEX1	99	68.354	ENSFHEG00000009031	apex1	83	68.354	Fundulus_heteroclitus
ENSHGLG00000002848	APEX1	99	61.950	ENSGMOG00000007943	apex1	99	61.950	Gadus_morhua
ENSHGLG00000002848	APEX1	88	72.760	ENSGAFG00000005311	apex1	99	67.722	Gambusia_affinis
ENSHGLG00000002848	APEX1	99	66.246	ENSGACG00000019497	apex1	99	69.925	Gasterosteus_aculeatus
ENSHGLG00000002848	APEX1	100	71.160	ENSGAGG00000014999	APEX1	100	71.160	Gopherus_agassizii
ENSHGLG00000002848	APEX1	100	94.654	ENSGGOG00000002128	APEX1	100	94.654	Gorilla_gorilla
ENSHGLG00000002848	APEX1	99	66.139	ENSHBUG00000005894	apex1	99	67.405	Haplochromis_burtoni
ENSHGLG00000002848	APEX1	100	100.000	ENSHGLG00100017878	APEX1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000002848	APEX1	99	66.667	ENSHCOG00000009961	apex1	99	66.667	Hippocampus_comes
ENSHGLG00000002848	APEX1	100	68.652	ENSIPUG00000005799	apex1	100	68.652	Ictalurus_punctatus
ENSHGLG00000002848	APEX1	100	94.654	ENSSTOG00000010096	APEX1	100	94.654	Ictidomys_tridecemlineatus
ENSHGLG00000002848	APEX1	100	84.591	ENSJJAG00000003660	-	100	84.591	Jaculus_jaculus
ENSHGLG00000002848	APEX1	100	94.340	ENSJJAG00000012067	-	100	94.340	Jaculus_jaculus
ENSHGLG00000002848	APEX1	94	84.899	ENSJJAG00000020465	-	96	84.899	Jaculus_jaculus
ENSHGLG00000002848	APEX1	88	71.685	ENSKMAG00000021171	apex1	99	66.772	Kryptolebias_marmoratus
ENSHGLG00000002848	APEX1	88	68.459	ENSLBEG00000010248	apex1	99	65.300	Labrus_bergylta
ENSHGLG00000002848	APEX1	100	67.812	ENSLACG00000008617	APEX1	100	67.812	Latimeria_chalumnae
ENSHGLG00000002848	APEX1	100	66.770	ENSLOCG00000015516	apex1	99	66.770	Lepisosteus_oculatus
ENSHGLG00000002848	APEX1	100	93.082	ENSLAFG00000021872	APEX1	100	93.082	Loxodonta_africana
ENSHGLG00000002848	APEX1	100	94.025	ENSMFAG00000002565	APEX1	100	94.025	Macaca_fascicularis
ENSHGLG00000002848	APEX1	100	94.025	ENSMMUG00000048039	APEX1	100	94.025	Macaca_mulatta
ENSHGLG00000002848	APEX1	100	94.025	ENSMNEG00000036944	APEX1	100	94.025	Macaca_nemestrina
ENSHGLG00000002848	APEX1	100	94.025	ENSMLEG00000042125	APEX1	100	94.025	Mandrillus_leucophaeus
ENSHGLG00000002848	APEX1	88	71.685	ENSMAMG00000023526	apex1	99	68.454	Mastacembelus_armatus
ENSHGLG00000002848	APEX1	87	72.101	ENSMZEG00005014187	apex1	99	66.772	Maylandia_zebra
ENSHGLG00000002848	APEX1	100	91.824	ENSMAUG00000013994	Apex1	100	91.824	Mesocricetus_auratus
ENSHGLG00000002848	APEX1	100	95.597	ENSMICG00000043554	APEX1	100	95.597	Microcebus_murinus
ENSHGLG00000002848	APEX1	100	92.138	ENSMOCG00000013721	Apex1	100	92.138	Microtus_ochrogaster
ENSHGLG00000002848	APEX1	88	68.214	ENSMMOG00000010031	apex1	97	63.836	Mola_mola
ENSHGLG00000002848	APEX1	100	84.688	ENSMODG00000007125	APEX1	100	86.335	Monodelphis_domestica
ENSHGLG00000002848	APEX1	88	63.799	ENSMALG00000011699	apex1	79	62.457	Monopterus_albus
ENSHGLG00000002848	APEX1	99	93.691	MGP_CAROLIEiJ_G0019209	Apex1	99	93.691	Mus_caroli
ENSHGLG00000002848	APEX1	100	94.340	ENSMUSG00000035960	Apex1	100	94.340	Mus_musculus
ENSHGLG00000002848	APEX1	100	93.711	MGP_PahariEiJ_G0030232	Apex1	100	93.711	Mus_pahari
ENSHGLG00000002848	APEX1	100	94.340	MGP_SPRETEiJ_G0020101	Apex1	100	94.340	Mus_spretus
ENSHGLG00000002848	APEX1	100	94.688	ENSMLUG00000028957	APEX1	100	94.688	Myotis_lucifugus
ENSHGLG00000002848	APEX1	100	71.384	ENSNGAG00000021748	-	99	71.384	Nannospalax_galili
ENSHGLG00000002848	APEX1	100	94.969	ENSNGAG00000002725	-	100	94.969	Nannospalax_galili
ENSHGLG00000002848	APEX1	87	71.739	ENSNBRG00000005334	apex1	91	66.456	Neolamprologus_brichardi
ENSHGLG00000002848	APEX1	100	94.340	ENSNLEG00000010839	APEX1	100	94.340	Nomascus_leucogenys
ENSHGLG00000002848	APEX1	100	86.478	ENSMEUG00000014519	APEX1	100	86.478	Notamacropus_eugenii
ENSHGLG00000002848	APEX1	100	94.025	ENSOPRG00000014029	APEX1	100	94.025	Ochotona_princeps
ENSHGLG00000002848	APEX1	100	98.113	ENSODEG00000001703	-	100	98.113	Octodon_degus
ENSHGLG00000002848	APEX1	97	77.994	ENSODEG00000004777	-	99	77.994	Octodon_degus
ENSHGLG00000002848	APEX1	100	74.691	ENSODEG00000006583	-	100	74.691	Octodon_degus
ENSHGLG00000002848	APEX1	87	72.302	ENSONIG00000012089	apex1	99	67.089	Oreochromis_niloticus
ENSHGLG00000002848	APEX1	90	82.456	ENSOANG00000008836	APEX1	80	78.704	Ornithorhynchus_anatinus
ENSHGLG00000002848	APEX1	100	94.340	ENSOCUG00000005022	APEX1	100	94.340	Oryctolagus_cuniculus
ENSHGLG00000002848	APEX1	99	66.981	ENSORLG00000012378	apex1	99	68.239	Oryzias_latipes
ENSHGLG00000002848	APEX1	99	66.981	ENSORLG00020021371	apex1	99	68.239	Oryzias_latipes_hni
ENSHGLG00000002848	APEX1	99	66.981	ENSORLG00015020089	apex1	99	68.239	Oryzias_latipes_hsok
ENSHGLG00000002848	APEX1	99	67.296	ENSOMEG00000018876	apex1	99	68.239	Oryzias_melastigma
ENSHGLG00000002848	APEX1	98	84.295	ENSOGAG00000029355	-	100	84.295	Otolemur_garnettii
ENSHGLG00000002848	APEX1	100	94.969	ENSOGAG00000013335	-	100	94.969	Otolemur_garnettii
ENSHGLG00000002848	APEX1	99	80.063	ENSOARG00000014424	-	100	80.063	Ovis_aries
ENSHGLG00000002848	APEX1	97	91.234	ENSOARG00000001876	-	100	91.234	Ovis_aries
ENSHGLG00000002848	APEX1	100	94.025	ENSOARG00000019740	-	100	94.025	Ovis_aries
ENSHGLG00000002848	APEX1	100	94.654	ENSPPAG00000038760	APEX1	100	94.654	Pan_paniscus
ENSHGLG00000002848	APEX1	100	96.855	ENSPPRG00000011794	APEX1	100	96.855	Panthera_pardus
ENSHGLG00000002848	APEX1	100	97.170	ENSPTIG00000014829	APEX1	100	97.170	Panthera_tigris_altaica
ENSHGLG00000002848	APEX1	100	94.654	ENSPTRG00000006093	APEX1	100	94.654	Pan_troglodytes
ENSHGLG00000002848	APEX1	100	94.025	ENSPANG00000022757	APEX1	100	94.025	Papio_anubis
ENSHGLG00000002848	APEX1	87	69.314	ENSPKIG00000003504	apex1	100	65.109	Paramormyrops_kingsleyae
ENSHGLG00000002848	APEX1	76	67.078	ENSPMGG00000016596	apex1	73	67.078	Periophthalmus_magnuspinnatus
ENSHGLG00000002848	APEX1	100	93.711	ENSPEMG00000019097	Apex1	100	93.711	Peromyscus_maniculatus_bairdii
ENSHGLG00000002848	APEX1	94	66.333	ENSPMAG00000007275	-	99	66.333	Petromyzon_marinus
ENSHGLG00000002848	APEX1	100	84.013	ENSPCIG00000023274	APEX1	100	85.981	Phascolarctos_cinereus
ENSHGLG00000002848	APEX1	88	73.118	ENSPFOG00000004178	apex1	99	69.401	Poecilia_formosa
ENSHGLG00000002848	APEX1	88	72.760	ENSPLAG00000012779	apex1	99	69.401	Poecilia_latipinna
ENSHGLG00000002848	APEX1	88	73.118	ENSPMEG00000019623	apex1	99	69.401	Poecilia_mexicana
ENSHGLG00000002848	APEX1	88	72.401	ENSPREG00000014298	apex1	99	68.770	Poecilia_reticulata
ENSHGLG00000002848	APEX1	100	94.340	ENSPPYG00000005565	APEX1	100	94.340	Pongo_abelii
ENSHGLG00000002848	APEX1	100	90.881	ENSPCAG00000010376	APEX1	100	90.881	Procavia_capensis
ENSHGLG00000002848	APEX1	100	95.597	ENSPCOG00000021564	APEX1	100	95.597	Propithecus_coquereli
ENSHGLG00000002848	APEX1	100	95.000	ENSPVAG00000010736	APEX1	100	95.000	Pteropus_vampyrus
ENSHGLG00000002848	APEX1	87	72.101	ENSPNYG00000023940	apex1	99	66.772	Pundamilia_nyererei
ENSHGLG00000002848	APEX1	93	66.892	ENSPNAG00000020897	apex1	96	66.780	Pygocentrus_nattereri
ENSHGLG00000002848	APEX1	100	93.396	ENSRNOG00000009663	Apex1	100	93.396	Rattus_norvegicus
ENSHGLG00000002848	APEX1	100	94.025	ENSRBIG00000038325	APEX1	99	94.025	Rhinopithecus_bieti
ENSHGLG00000002848	APEX1	100	79.874	ENSSBOG00000031372	-	100	79.874	Saimiri_boliviensis_boliviensis
ENSHGLG00000002848	APEX1	100	94.969	ENSSBOG00000018921	-	100	94.969	Saimiri_boliviensis_boliviensis
ENSHGLG00000002848	APEX1	100	83.025	ENSSHAG00000013524	APEX1	100	84.356	Sarcophilus_harrisii
ENSHGLG00000002848	APEX1	100	62.893	ENSSFOG00015001948	apex1	100	62.579	Scleropages_formosus
ENSHGLG00000002848	APEX1	87	70.504	ENSSMAG00000013348	apex1	99	66.246	Scophthalmus_maximus
ENSHGLG00000002848	APEX1	99	65.506	ENSSDUG00000016377	apex1	99	65.506	Seriola_dumerili
ENSHGLG00000002848	APEX1	99	66.139	ENSSLDG00000023005	apex1	99	66.139	Seriola_lalandi_dorsalis
ENSHGLG00000002848	APEX1	95	72.757	ENSSPUG00000000531	APEX1	99	72.757	Sphenodon_punctatus
ENSHGLG00000002848	APEX1	88	70.251	ENSSPAG00000000458	apex1	96	68.259	Stegastes_partitus
ENSHGLG00000002848	APEX1	98	55.346	ENSSSCG00000039705	-	99	57.616	Sus_scrofa
ENSHGLG00000002848	APEX1	100	95.597	ENSSSCG00000040060	-	100	95.597	Sus_scrofa
ENSHGLG00000002848	APEX1	74	61.017	ENSTGUG00000014378	APEX1	100	61.017	Taeniopygia_guttata
ENSHGLG00000002848	APEX1	87	68.345	ENSTRUG00000004268	apex1	95	63.608	Takifugu_rubripes
ENSHGLG00000002848	APEX1	99	63.924	ENSTNIG00000005778	apex1	99	63.924	Tetraodon_nigroviridis
ENSHGLG00000002848	APEX1	100	91.509	ENSTBEG00000006405	APEX1	100	91.509	Tupaia_belangeri
ENSHGLG00000002848	APEX1	74	96.186	ENSTTRG00000007860	APEX1	100	96.186	Tursiops_truncatus
ENSHGLG00000002848	APEX1	100	96.541	ENSUAMG00000010457	APEX1	100	96.541	Ursus_americanus
ENSHGLG00000002848	APEX1	100	96.541	ENSUMAG00000009178	APEX1	100	96.541	Ursus_maritimus
ENSHGLG00000002848	APEX1	74	90.254	ENSVPAG00000005083	APEX1	100	90.254	Vicugna_pacos
ENSHGLG00000002848	APEX1	100	93.396	ENSVVUG00000009010	APEX1	100	93.396	Vulpes_vulpes
ENSHGLG00000002848	APEX1	100	66.978	ENSXETG00000024773	apex1	100	66.978	Xenopus_tropicalis
ENSHGLG00000002848	APEX1	88	72.760	ENSXCOG00000015233	apex1	99	69.085	Xiphophorus_couchianus
ENSHGLG00000002848	APEX1	93	68.404	ENSXMAG00000006195	apex1	99	69.085	Xiphophorus_maculatus