EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000002940 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 2609 bases
Position: chrJH602166.1:4712419-4715027
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000003994	DND1_DSRM	PF14709.7	7.1e-27	1	1
ENSHGLP00000003994	RRM_1	PF00076.22	1.3e-27	1	2
ENSHGLP00000003994	RRM_1	PF00076.22	1.3e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000004052	-	1395	-	ENSHGLP00000003994	464 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000002940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000002940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000002940	-	100	76.967	ENSHGLG00000002463	-	99	81.713
ENSHGLG00000002940	-	56	47.766	ENSHGLG00000013273	-	55	47.766
ENSHGLG00000002940	-	53	53.846	ENSHGLG00000002189	-	50	47.253
ENSHGLG00000002940	-	57	56.015	ENSHGLG00000016914	RBM47	84	71.212
ENSHGLG00000002940	-	62	30.795	ENSHGLG00000009358	DND1	84	30.795
ENSHGLG00000002940	-	88	59.486	ENSHGLG00000008955	A1CF	88	59.486
ENSHGLG00000002940	-	98	63.548	ENSHGLG00000010742	-	97	63.548
ENSHGLG00000002940	-	55	43.262	ENSHGLG00000018349	-	50	41.275

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000002940	-	100	79.658	ENSG00000151962	RBM46	100	93.985	Homo_sapiens
ENSHGLG00000002940	-	89	54.262	ENSAPOG00000009209	rbm46	93	54.262	Acanthochromis_polyacanthus
ENSHGLG00000002940	-	100	79.468	ENSAMEG00000013290	RBM46	98	79.468	Ailuropoda_melanoleuca
ENSHGLG00000002940	-	88	51.410	ENSACIG00000014500	rbm46	91	51.515	Amphilophus_citrinellus
ENSHGLG00000002940	-	87	53.390	ENSAOCG00000001892	-	93	53.390	Amphiprion_ocellaris
ENSHGLG00000002940	-	83	56.552	ENSAPEG00000017762	rbm46	96	56.552	Amphiprion_percula
ENSHGLG00000002940	-	86	55.556	ENSATEG00000010775	rbm46	94	52.041	Anabas_testudineus
ENSHGLG00000002940	-	88	71.306	ENSAPLG00000005116	RBM46	100	71.306	Anas_platyrhynchos
ENSHGLG00000002940	-	100	73.714	ENSACAG00000015599	RBM46	98	73.714	Anolis_carolinensis
ENSHGLG00000002940	-	100	76.806	ENSANAG00000029193	RBM46	99	79.015	Aotus_nancymaae
ENSHGLG00000002940	-	92	51.400	ENSACLG00000016153	rbm46	86	51.697	Astatotilapia_calliptera
ENSHGLG00000002940	-	85	58.945	ENSAMXG00000009397	rbm46	98	58.945	Astyanax_mexicanus
ENSHGLG00000002940	-	94	50.784	ENSAMXG00000020892	-	95	50.784	Astyanax_mexicanus
ENSHGLG00000002940	-	100	76.996	ENSBTAG00000001696	RBM46	98	78.517	Bos_taurus
ENSHGLG00000002940	-	100	77.186	ENSCJAG00000001768	RBM46	99	79.657	Callithrix_jacchus
ENSHGLG00000002940	-	100	79.658	ENSCAFG00000008473	RBM46	98	79.658	Canis_familiaris
ENSHGLG00000002940	-	100	79.658	ENSCAFG00020002468	RBM46	98	79.658	Canis_lupus_dingo
ENSHGLG00000002940	-	100	78.707	ENSCHIG00000000502	RBM46	98	78.707	Capra_hircus
ENSHGLG00000002940	-	89	79.237	ENSTSYG00000010435	RBM46	99	79.229	Carlito_syrichta
ENSHGLG00000002940	-	72	77.657	ENSCAPG00000011841	-	98	77.657	Cavia_aperea
ENSHGLG00000002940	-	89	81.144	ENSCAPG00000011928	-	97	81.144	Cavia_aperea
ENSHGLG00000002940	-	100	79.317	ENSCPOG00000019272	-	98	79.317	Cavia_porcellus
ENSHGLG00000002940	-	97	73.725	ENSCPOG00000020396	-	98	73.725	Cavia_porcellus
ENSHGLG00000002940	-	100	81.214	ENSCPOG00000010284	-	99	81.156	Cavia_porcellus
ENSHGLG00000002940	-	100	67.899	ENSCCAG00000001323	-	99	69.913	Cebus_capucinus
ENSHGLG00000002940	-	100	79.278	ENSCCAG00000027619	-	99	80.086	Cebus_capucinus
ENSHGLG00000002940	-	89	79.873	ENSCATG00000040148	RBM46	99	79.657	Cercocebus_atys
ENSHGLG00000002940	-	99	80.952	ENSCLAG00000005846	-	99	81.156	Chinchilla_lanigera
ENSHGLG00000002940	-	98	76.023	ENSCLAG00000011886	-	97	76.023	Chinchilla_lanigera
ENSHGLG00000002940	-	100	79.658	ENSCSAG00000003263	RBM46	98	79.658	Chlorocebus_sabaeus
ENSHGLG00000002940	-	100	78.585	ENSCHOG00000003429	RBM46	98	78.585	Choloepus_hoffmanni
ENSHGLG00000002940	-	83	75.056	ENSCPBG00000009314	RBM46	97	75.056	Chrysemys_picta_bellii
ENSHGLG00000002940	-	89	79.449	ENSCANG00000039065	RBM46	99	79.443	Colobus_angolensis_palliatus
ENSHGLG00000002940	-	100	78.707	ENSCGRG00001016714	Rbm46	99	79.015	Cricetulus_griseus_chok1gshd
ENSHGLG00000002940	-	100	78.707	ENSCGRG00000011738	Rbm46	99	79.015	Cricetulus_griseus_crigri
ENSHGLG00000002940	-	84	49.107	ENSCSEG00000005530	rbm46	96	49.107	Cynoglossus_semilaevis
ENSHGLG00000002940	-	87	54.444	ENSCVAG00000021013	rbm46	95	54.444	Cyprinodon_variegatus
ENSHGLG00000002940	-	95	54.653	ENSDARG00000079452	rbm46	95	55.110	Danio_rerio
ENSHGLG00000002940	-	100	78.897	ENSDNOG00000016195	RBM46	98	78.897	Dasypus_novemcinctus
ENSHGLG00000002940	-	100	78.707	ENSDORG00000006405	Rbm46	99	79.443	Dipodomys_ordii
ENSHGLG00000002940	-	100	74.335	ENSETEG00000014902	RBM46	98	74.335	Echinops_telfairi
ENSHGLG00000002940	-	100	77.757	ENSEASG00005015821	RBM46	98	77.757	Equus_asinus_asinus
ENSHGLG00000002940	-	89	78.390	ENSECAG00000007649	RBM46	97	78.390	Equus_caballus
ENSHGLG00000002940	-	100	76.806	ENSEEUG00000011824	RBM46	98	76.806	Erinaceus_europaeus
ENSHGLG00000002940	-	59	68.301	ENSELUG00000008166	rbm46	80	68.301	Esox_lucius
ENSHGLG00000002940	-	100	79.278	ENSFCAG00000029812	RBM46	99	80.086	Felis_catus
ENSHGLG00000002940	-	89	70.701	ENSFALG00000013157	RBM46	93	70.701	Ficedula_albicollis
ENSHGLG00000002940	-	93	74.134	ENSFDAG00000006445	-	96	74.134	Fukomys_damarensis
ENSHGLG00000002940	-	100	78.327	ENSFDAG00000019281	-	98	78.327	Fukomys_damarensis
ENSHGLG00000002940	-	72	52.520	ENSFHEG00000013257	rbm46	87	52.520	Fundulus_heteroclitus
ENSHGLG00000002940	-	89	65.116	ENSGALG00000009278	RBM46	99	65.328	Gallus_gallus
ENSHGLG00000002940	-	55	67.944	ENSGAFG00000020245	rbm46	67	67.944	Gambusia_affinis
ENSHGLG00000002940	-	96	72.222	ENSGAGG00000002019	RBM46	95	72.222	Gopherus_agassizii
ENSHGLG00000002940	-	100	79.658	ENSGGOG00000001876	RBM46	99	79.872	Gorilla_gorilla
ENSHGLG00000002940	-	84	54.265	ENSHBUG00000009609	rbm46	91	54.177	Haplochromis_burtoni
ENSHGLG00000002940	-	100	83.301	ENSHGLG00100012752	-	99	82.618	Heterocephalus_glaber_male
ENSHGLG00000002940	-	99	93.305	ENSHGLG00100018987	-	99	93.305	Heterocephalus_glaber_male
ENSHGLG00000002940	-	98	63.548	ENSHGLG00100004977	-	97	63.548	Heterocephalus_glaber_male
ENSHGLG00000002940	-	91	43.590	ENSHCOG00000012998	rbm46	96	43.590	Hippocampus_comes
ENSHGLG00000002940	-	97	52.662	ENSIPUG00000024038	rbm46	98	54.453	Ictalurus_punctatus
ENSHGLG00000002940	-	100	79.468	ENSSTOG00000007918	RBM46	99	79.872	Ictidomys_tridecemlineatus
ENSHGLG00000002940	-	89	77.754	ENSJJAG00000003902	Rbm46	99	77.516	Jaculus_jaculus
ENSHGLG00000002940	-	97	52.965	ENSKMAG00000015127	rbm46	94	53.024	Kryptolebias_marmoratus
ENSHGLG00000002940	-	100	70.588	ENSLACG00000002062	RBM46	98	70.588	Latimeria_chalumnae
ENSHGLG00000002940	-	96	60.672	ENSLOCG00000008298	rbm46	96	63.839	Lepisosteus_oculatus
ENSHGLG00000002940	-	88	79.443	ENSLAFG00000015448	RBM46	99	79.443	Loxodonta_africana
ENSHGLG00000002940	-	89	80.085	ENSMFAG00000043485	RBM46	99	79.872	Macaca_fascicularis
ENSHGLG00000002940	-	89	80.085	ENSMMUG00000021147	RBM46	97	80.085	Macaca_mulatta
ENSHGLG00000002940	-	89	80.085	ENSMNEG00000002787	RBM46	99	79.872	Macaca_nemestrina
ENSHGLG00000002940	-	89	79.873	ENSMLEG00000029756	RBM46	99	79.657	Mandrillus_leucophaeus
ENSHGLG00000002940	-	84	56.054	ENSMAMG00000009093	rbm46	96	53.402	Mastacembelus_armatus
ENSHGLG00000002940	-	90	54.274	ENSMZEG00005027849	rbm46	97	54.274	Maylandia_zebra
ENSHGLG00000002940	-	89	65.672	ENSMGAG00000001457	RBM46	99	65.885	Meleagris_gallopavo
ENSHGLG00000002940	-	100	78.707	ENSMAUG00000009911	Rbm46	99	79.015	Mesocricetus_auratus
ENSHGLG00000002940	-	100	78.897	ENSMICG00000042747	RBM46	99	79.229	Microcebus_murinus
ENSHGLG00000002940	-	100	79.278	ENSMOCG00000001188	Rbm46	99	79.657	Microtus_ochrogaster
ENSHGLG00000002940	-	85	53.493	ENSMMOG00000011214	rbm46	86	53.493	Mola_mola
ENSHGLG00000002940	-	100	72.203	ENSMODG00000001302	RBM46	98	72.203	Monodelphis_domestica
ENSHGLG00000002940	-	76	54.926	ENSMALG00000006185	rbm46	87	55.802	Monopterus_albus
ENSHGLG00000002940	-	100	78.137	MGP_CAROLIEiJ_G0025101	Rbm46	99	79.229	Mus_caroli
ENSHGLG00000002940	-	100	77.947	ENSMUSG00000033882	Rbm46	99	78.801	Mus_musculus
ENSHGLG00000002940	-	100	79.087	MGP_PahariEiJ_G0026544	Rbm46	99	79.657	Mus_pahari
ENSHGLG00000002940	-	100	77.947	MGP_SPRETEiJ_G0026043	Rbm46	99	78.801	Mus_spretus
ENSHGLG00000002940	-	89	80.085	ENSMPUG00000005670	RBM46	97	80.085	Mustela_putorius_furo
ENSHGLG00000002940	-	100	78.558	ENSMLUG00000003221	RBM46	98	78.558	Myotis_lucifugus
ENSHGLG00000002940	-	100	77.947	ENSNGAG00000004231	Rbm46	99	79.015	Nannospalax_galili
ENSHGLG00000002940	-	84	57.176	ENSNBRG00000000273	rbm46	84	57.176	Neolamprologus_brichardi
ENSHGLG00000002940	-	89	79.873	ENSNLEG00000006184	RBM46	99	79.657	Nomascus_leucogenys
ENSHGLG00000002940	-	77	78.125	ENSMEUG00000013328	RBM46	100	78.125	Notamacropus_eugenii
ENSHGLG00000002940	-	55	81.625	ENSOPRG00000007136	RBM46	100	83.039	Ochotona_princeps
ENSHGLG00000002940	-	89	77.754	ENSODEG00000018002	-	92	77.754	Octodon_degus
ENSHGLG00000002940	-	100	78.707	ENSODEG00000000735	-	99	78.801	Octodon_degus
ENSHGLG00000002940	-	84	54.444	ENSONIG00000014096	rbm46	96	54.444	Oreochromis_niloticus
ENSHGLG00000002940	-	95	70.942	ENSOANG00000002141	RBM46	100	70.800	Ornithorhynchus_anatinus
ENSHGLG00000002940	-	100	79.087	ENSOCUG00000017859	RBM46	98	79.087	Oryctolagus_cuniculus
ENSHGLG00000002940	-	86	54.273	ENSORLG00000002429	rbm46	93	53.587	Oryzias_latipes
ENSHGLG00000002940	-	88	51.695	ENSORLG00020022154	rbm46	88	51.008	Oryzias_latipes_hni
ENSHGLG00000002940	-	88	54.525	ENSORLG00015020234	rbm46	92	54.525	Oryzias_latipes_hsok
ENSHGLG00000002940	-	83	51.663	ENSOMEG00000022580	rbm46	95	49.900	Oryzias_melastigma
ENSHGLG00000002940	-	100	79.468	ENSOGAG00000005647	RBM46	98	79.468	Otolemur_garnettii
ENSHGLG00000002940	-	100	78.517	ENSOARG00000016406	RBM46	98	78.517	Ovis_aries
ENSHGLG00000002940	-	89	80.085	ENSPPAG00000043236	RBM46	99	79.872	Pan_paniscus
ENSHGLG00000002940	-	100	79.278	ENSPPRG00000009416	RBM46	99	80.086	Panthera_pardus
ENSHGLG00000002940	-	100	79.278	ENSPTIG00000017449	RBM46	99	80.086	Panthera_tigris_altaica
ENSHGLG00000002940	-	89	80.085	ENSPTRG00000016538	RBM46	99	79.872	Pan_troglodytes
ENSHGLG00000002940	-	100	79.658	ENSPANG00000004186	RBM46	99	79.872	Papio_anubis
ENSHGLG00000002940	-	98	56.836	ENSPKIG00000015334	rbm46	88	56.836	Paramormyrops_kingsleyae
ENSHGLG00000002940	-	89	75.687	ENSPSIG00000006429	RBM46	97	75.687	Pelodiscus_sinensis
ENSHGLG00000002940	-	84	52.871	ENSPMGG00000019872	rbm46	92	56.220	Periophthalmus_magnuspinnatus
ENSHGLG00000002940	-	100	78.707	ENSPEMG00000013899	Rbm46	99	79.015	Peromyscus_maniculatus_bairdii
ENSHGLG00000002940	-	100	78.517	ENSPCIG00000029626	RBM46	98	78.517	Phascolarctos_cinereus
ENSHGLG00000002940	-	72	66.780	ENSPFOG00000001079	rbm46	67	66.780	Poecilia_formosa
ENSHGLG00000002940	-	96	51.562	ENSPLAG00000004541	rbm46	90	51.562	Poecilia_latipinna
ENSHGLG00000002940	-	92	52.857	ENSPMEG00000015724	rbm46	92	57.442	Poecilia_mexicana
ENSHGLG00000002940	-	96	51.562	ENSPREG00000014464	rbm46	95	56.236	Poecilia_reticulata
ENSHGLG00000002940	-	100	79.278	ENSPPYG00000015144	RBM46	98	79.278	Pongo_abelii
ENSHGLG00000002940	-	100	73.764	ENSPCAG00000003110	RBM46	98	74.335	Procavia_capensis
ENSHGLG00000002940	-	100	78.707	ENSPCOG00000024347	RBM46	99	79.443	Propithecus_coquereli
ENSHGLG00000002940	-	100	79.278	ENSPVAG00000008376	RBM46	98	79.278	Pteropus_vampyrus
ENSHGLG00000002940	-	94	53.906	ENSPNAG00000025312	rbm46	95	53.635	Pygocentrus_nattereri
ENSHGLG00000002940	-	100	78.707	ENSRNOG00000025823	Rbm46	98	78.707	Rattus_norvegicus
ENSHGLG00000002940	-	89	79.661	ENSRBIG00000032583	RBM46	99	79.443	Rhinopithecus_bieti
ENSHGLG00000002940	-	89	79.661	ENSRROG00000044288	RBM46	99	79.443	Rhinopithecus_roxellana
ENSHGLG00000002940	-	100	79.087	ENSSBOG00000033028	RBM46	99	79.872	Saimiri_boliviensis_boliviensis
ENSHGLG00000002940	-	100	78.517	ENSSHAG00000012596	RBM46	98	78.517	Sarcophilus_harrisii
ENSHGLG00000002940	-	96	58.812	ENSSFOG00015000087	rbm46	94	58.812	Scleropages_formosus
ENSHGLG00000002940	-	86	55.149	ENSSMAG00000017042	rbm46	95	55.149	Scophthalmus_maximus
ENSHGLG00000002940	-	84	64.331	ENSSDUG00000020645	rbm46	89	55.876	Seriola_dumerili
ENSHGLG00000002940	-	100	79.468	ENSSARG00000006520	RBM46	98	79.468	Sorex_araneus
ENSHGLG00000002940	-	100	74.194	ENSSPUG00000012525	-	98	74.194	Sphenodon_punctatus
ENSHGLG00000002940	-	100	69.732	ENSSPUG00000004773	-	98	74.200	Sphenodon_punctatus
ENSHGLG00000002940	-	85	55.841	ENSSPAG00000013697	rbm46	94	55.841	Stegastes_partitus
ENSHGLG00000002940	-	89	79.661	ENSSSCG00000008994	RBM46	97	79.661	Sus_scrofa
ENSHGLG00000002940	-	88	69.807	ENSTGUG00000005307	RBM46	100	69.807	Taeniopygia_guttata
ENSHGLG00000002940	-	88	54.305	ENSTRUG00000004237	rbm46	94	54.305	Takifugu_rubripes
ENSHGLG00000002940	-	85	52.412	ENSTNIG00000008714	rbm46	94	49.412	Tetraodon_nigroviridis
ENSHGLG00000002940	-	100	75.810	ENSTBEG00000013949	RBM46	98	75.810	Tupaia_belangeri
ENSHGLG00000002940	-	100	77.947	ENSTTRG00000001239	RBM46	98	77.947	Tursiops_truncatus
ENSHGLG00000002940	-	100	79.468	ENSUAMG00000026593	RBM46	98	79.468	Ursus_americanus
ENSHGLG00000002940	-	100	79.278	ENSUMAG00000016442	RBM46	98	79.278	Ursus_maritimus
ENSHGLG00000002940	-	100	79.468	ENSVVUG00000024957	RBM46	99	79.872	Vulpes_vulpes
ENSHGLG00000002940	-	72	60.763	ENSXETG00000032067	-	99	61.853	Xenopus_tropicalis
ENSHGLG00000002940	-	100	45.386	ENSXETG00000032344	-	98	45.386	Xenopus_tropicalis
ENSHGLG00000002940	-	100	61.143	ENSXETG00000022412	-	98	61.143	Xenopus_tropicalis
ENSHGLG00000002940	-	88	54.158	ENSXMAG00000008237	rbm46	93	53.731	Xiphophorus_maculatus